RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 ZNF646O15015 1829 aaPredicted RBP23.41■■□□□ 1.34
UBXN1-208ENST00000527421 USP17L3A6NCW0 530 aa23.41■■□□□ 1.34
UBXN1-208ENST00000527421 USP17L4A6NCW7 530 aa23.41■■□□□ 1.34
UBXN1-208ENST00000527421 RSBN1LQ6PCB5 846 aaPredicted RBP23.41■■□□□ 1.34
UBXN1-208ENST00000527421 USP17L1Q7RTZ2 530 aa23.41■■□□□ 1.34
UBXN1-208ENST00000527421 TRPM4Q8TD43 1214 aa23.41■■□□□ 1.34
UBXN1-208ENST00000527421 TRIM27P14373 513 aa23.4■■□□□ 1.34
UBXN1-208ENST00000527421 INTS3Q68E01 1043 aaKnown RBP23.4■■□□□ 1.34
UBXN1-208ENST00000527421 ATF7IPQ6VMQ6 1270 aa23.4■■□□□ 1.34
UBXN1-208ENST00000527421 AGBL3Q8NEM8 1001 aa23.4■■□□□ 1.34
UBXN1-208ENST00000527421 HDAC5Q9UQL6 1122 aa23.4■■□□□ 1.34
UBXN1-208ENST00000527421 SNAP23O00161 211 aa23.39■■□□□ 1.33
UBXN1-208ENST00000527421 PLIN1O60240 522 aa23.39■■□□□ 1.33
UBXN1-208ENST00000527421 COL13A1Q5TAT6 717 aaPredicted RBP23.39■■□□□ 1.33
UBXN1-208ENST00000527421 C15orf52Q6ZUT6 534 aaKnown RBP23.39■■□□□ 1.33
UBXN1-208ENST00000527421 PUS3Q9BZE2 481 aaKnown RBP23.39■■□□□ 1.33
UBXN1-208ENST00000527421 CREBZFQ9NS37 354 aa23.39■■□□□ 1.33
UBXN1-208ENST00000527421 SAMD7Q7Z3H4 446 aa23.38■■□□□ 1.33
UBXN1-208ENST00000527421 ZC3H15Q8WU90 426 aaKnown RBP23.38■■□□□ 1.33
UBXN1-208ENST00000527421 FBXW7Q969H0 707 aa23.38■■□□□ 1.33
UBXN1-208ENST00000527421 MROH5Q6ZUA9 1318 aa23.37■■□□□ 1.33
UBXN1-208ENST00000527421 IRS2Q9Y4H2 1338 aa23.37■■□□□ 1.33
UBXN1-208ENST00000527421 HIRAP54198 1017 aaPredicted RBP23.37■■□□□ 1.33
UBXN1-208ENST00000527421 TBC1D10BQ4KMP7 808 aaPredicted RBP23.37■■□□□ 1.33
UBXN1-208ENST00000527421 ZKSCAN2Q63HK3 967 aa23.37■■□□□ 1.33
UBXN1-208ENST00000527421 MEIS3Q99687 375 aa23.37■■□□□ 1.33
UBXN1-208ENST00000527421 TRPM7Q96QT4 1865 aa23.36■■□□□ 1.33
UBXN1-208ENST00000527421 STRIP1Q5VSL9 837 aa23.36■■□□□ 1.33
UBXN1-208ENST00000527421 ZNF804AQ7Z570 1209 aa23.36■■□□□ 1.33
UBXN1-208ENST00000527421 RIPOR2Q9Y4F9 1068 aa23.36■■□□□ 1.33
UBXN1-208ENST00000527421 LRRFIP2Q9Y608 721 aaKnown RBP23.36■■□□□ 1.33
UBXN1-208ENST00000527421 MYO3BQ8WXR4 1341 aa23.35■■□□□ 1.33
UBXN1-208ENST00000527421 TMEM88BA6NKF7 163 aa23.35■■□□□ 1.33
UBXN1-208ENST00000527421 UBE4AQ14139 1066 aa23.35■■□□□ 1.33
UBXN1-208ENST00000527421 KIF4BQ2VIQ3 1234 aa23.35■■□□□ 1.33
UBXN1-208ENST00000527421 DACT2Q5SW24 774 aa23.35■■□□□ 1.33
UBXN1-208ENST00000527421 KLHDC4Q8TBB5 520 aa23.35■■□□□ 1.33
UBXN1-208ENST00000527421 CLUAP1Q96AJ1 413 aa23.35■■□□□ 1.33
UBXN1-208ENST00000527421 GMLQ99445 158 aa23.35■■□□□ 1.33
UBXN1-208ENST00000527421 CD209Q9NNX6 404 aa23.35■■□□□ 1.33
UBXN1-208ENST00000527421 PGAP2Q9UHJ9 254 aa23.35■■□□□ 1.33
UBXN1-208ENST00000527421 EGFRP00533 1210 aa23.34■■□□□ 1.33
UBXN1-208ENST00000527421 GNAI3P08754 354 aa23.34■■□□□ 1.33
UBXN1-208ENST00000527421 USP17L8P0C7I0 530 aa23.34■■□□□ 1.33
UBXN1-208ENST00000527421 ZNF280AP59817 542 aaPredicted RBP23.34■■□□□ 1.33
UBXN1-208ENST00000527421 LRRC24Q50LG9 513 aa23.34■■□□□ 1.33
UBXN1-208ENST00000527421 METTL24Q5JXM2 366 aa23.34■■□□□ 1.33
UBXN1-208ENST00000527421 RBM26Q5T8P6 1007 aaKnown RBP23.34■■□□□ 1.33
UBXN1-208ENST00000527421 TNNQ9UQP3 1299 aa23.34■■□□□ 1.33
UBXN1-208ENST00000527421 TTLL5Q6EMB2 1281 aa23.33■■□□□ 1.33
UBXN1-208ENST00000527421 TRAF5O00463 557 aa23.32■■□□□ 1.32
UBXN1-208ENST00000527421 RFX5P48382 616 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-208ENST00000527421 GTF2IP78347 998 aa23.32■■□□□ 1.32
UBXN1-208ENST00000527421 MXD3Q9BW11 206 aa23.32■■□□□ 1.32
UBXN1-208ENST00000527421 GLIS2Q9BZE0 524 aaPredicted RBP23.32■■□□□ 1.32
UBXN1-208ENST00000527421 PCNTO95613 3336 aa23.3■■□□□ 1.32
UBXN1-208ENST00000527421 EYA2O00167 538 aa23.3■■□□□ 1.32
UBXN1-208ENST00000527421 IL1R1P14778 569 aa23.3■■□□□ 1.32
UBXN1-208ENST00000527421 PTPN12Q05209 780 aaKnown RBP23.3■■□□□ 1.32
UBXN1-208ENST00000527421 CDC37L1Q7L3B6 337 aa23.3■■□□□ 1.32
UBXN1-208ENST00000527421 FTSJ3Q8IY81 847 aaKnown RBP23.3■■□□□ 1.32
UBXN1-208ENST00000527421 VGLL2Q8N8G2 317 aa23.3■■□□□ 1.32
UBXN1-208ENST00000527421 MYOZ2Q9NPC6 264 aa23.3■■□□□ 1.32
UBXN1-208ENST00000527421 POLR2AP24928 1970 aaKnown RBP23.29■■□□□ 1.32
UBXN1-208ENST00000527421 PDE8BO95263 885 aa23.29■■□□□ 1.32
UBXN1-208ENST00000527421 FMR1Q06787 632 aaKnown RBP eCLIP23.29■■□□□ 1.32
UBXN1-208ENST00000527421 TNS4Q8IZW8 715 aa23.29■■□□□ 1.32
UBXN1-208ENST00000527421 OGFOD1Q8N543 542 aa23.29■■□□□ 1.32
UBXN1-208ENST00000527421 TMEM57Q8N5G2 664 aa23.29■■□□□ 1.32
UBXN1-208ENST00000527421 DCPSQ96C86 337 aaKnown RBP23.29■■□□□ 1.32
UBXN1-208ENST00000527421 CNTNAP1P78357 1384 aa23.28■■□□□ 1.32
UBXN1-208ENST00000527421 GYG1P46976 350 aa23.28■■□□□ 1.32
UBXN1-208ENST00000527421 GGA3Q9NZ52 723 aa23.28■■□□□ 1.32
UBXN1-208ENST00000527421 MKRN1Q9UHC7 482 aaKnown RBP23.28■■□□□ 1.32
UBXN1-208ENST00000527421 FBXO3Q9UK99 471 aa23.28■■□□□ 1.32
UBXN1-208ENST00000527421 CAPN15O75808 1086 aa23.27■■□□□ 1.32
UBXN1-208ENST00000527421 HIBADHP31937 336 aaKnown RBP23.27■■□□□ 1.32
UBXN1-208ENST00000527421 PUM3Q15397 648 aaKnown RBP23.27■■□□□ 1.32
UBXN1-208ENST00000527421 KRT26Q7Z3Y9 468 aa23.27■■□□□ 1.32
UBXN1-208ENST00000527421 SIL1Q9H173 461 aa23.27■■□□□ 1.32
UBXN1-208ENST00000527421 ABT1Q9ULW3 272 aaKnown RBP23.27■■□□□ 1.32
UBXN1-208ENST00000527421 ARAP2Q8WZ64 1704 aa23.27■■□□□ 1.32
UBXN1-208ENST00000527421 CIAO1O76071 339 aa23.26■■□□□ 1.31
UBXN1-208ENST00000527421 MMP14P50281 582 aa23.26■■□□□ 1.31
UBXN1-208ENST00000527421 USP48Q86UV5 1035 aa23.26■■□□□ 1.31
UBXN1-208ENST00000527421 VPS37DQ86XT2 251 aa23.26■■□□□ 1.31
UBXN1-208ENST00000527421 KIAA0825Q8IV33 1275 aa23.26■■□□□ 1.31
UBXN1-208ENST00000527421 DZIP1LQ8IYY4 767 aaKnown RBP23.26■■□□□ 1.31
UBXN1-208ENST00000527421 FAM84BQ96KN1 310 aaPredicted RBP23.26■■□□□ 1.31
UBXN1-208ENST00000527421 HDAC9Q9UKV0 1011 aa23.26■■□□□ 1.31
UBXN1-208ENST00000527421 CELF2O95319 508 aaKnown RBP23.25■■□□□ 1.31
UBXN1-208ENST00000527421 GNAI2P04899 355 aa23.25■■□□□ 1.31
UBXN1-208ENST00000527421 SCARF1Q14162 830 aa23.25■■□□□ 1.31
UBXN1-208ENST00000527421 CAVIN4Q5BKX8 364 aa23.25■■□□□ 1.31
UBXN1-208ENST00000527421 ATG9AQ7Z3C6 839 aa23.25■■□□□ 1.31
UBXN1-208ENST00000527421 ASTN2O75129 1339 aaPredicted RBP23.25■■□□□ 1.31
UBXN1-208ENST00000527421 SRGAP3O43295 1099 aa23.24■■□□□ 1.31
UBXN1-208ENST00000527421 SASH1O94885 1247 aa23.24■■□□□ 1.31
UBXN1-208ENST00000527421 IFIT1P09914 478 aaKnown RBP23.24■■□□□ 1.31
UBXN1-208ENST00000527421 FKBP1AP62942 108 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms