RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 MEIS3Q99687 375 aa22.8■■□□□ 1.24
TRIM3-205ENST00000527237 KCNJ4P48050 445 aa22.79■■□□□ 1.24
TRIM3-205ENST00000527237 HIRAP54198 1017 aaPredicted RBP22.79■■□□□ 1.24
TRIM3-205ENST00000527237 FMR1Q06787 632 aaKnown RBP eCLIP22.79■■□□□ 1.24
TRIM3-205ENST00000527237 ARHGAP45Q92619 1136 aa22.79■■□□□ 1.24
TRIM3-205ENST00000527237 VIL1P09327 827 aaKnown RBP22.78■■□□□ 1.24
TRIM3-205ENST00000527237 UBTFL1P0CB47 393 aaPredicted RBP22.78■■□□□ 1.24
TRIM3-205ENST00000527237 LRRC24Q50LG9 513 aa22.78■■□□□ 1.24
TRIM3-205ENST00000527237 SAMD7Q7Z3H4 446 aa22.78■■□□□ 1.24
TRIM3-205ENST00000527237 CLUAP1Q96AJ1 413 aa22.78■■□□□ 1.24
TRIM3-205ENST00000527237 MXD3Q9BW11 206 aa22.78■■□□□ 1.24
TRIM3-205ENST00000527237 INTS3Q68E01 1043 aaKnown RBP22.77■■□□□ 1.24
TRIM3-205ENST00000527237 ATF7IPQ6VMQ6 1270 aa22.77■■□□□ 1.24
TRIM3-205ENST00000527237 CNTROBQ8N137 903 aa22.77■■□□□ 1.24
TRIM3-205ENST00000527237 DNAJC5GQ8N7S2 189 aa22.77■■□□□ 1.24
TRIM3-205ENST00000527237 DPF2Q92785 391 aa22.77■■□□□ 1.24
TRIM3-205ENST00000527237 LRRFIP2Q9Y608 721 aaKnown RBP22.77■■□□□ 1.24
TRIM3-205ENST00000527237 RPS12P25398 132 aaKnown RBP22.76■■□□□ 1.23
TRIM3-205ENST00000527237 RFX5P48382 616 aaPredicted RBP22.76■■□□□ 1.23
TRIM3-205ENST00000527237 TBC1D10BQ4KMP7 808 aaPredicted RBP22.76■■□□□ 1.23
TRIM3-205ENST00000527237 RSBN1LQ6PCB5 846 aaPredicted RBP22.76■■□□□ 1.23
TRIM3-205ENST00000527237 PODNQ7Z5L7 613 aa22.76■■□□□ 1.23
TRIM3-205ENST00000527237 FBXW7Q969H0 707 aa22.76■■□□□ 1.23
TRIM3-205ENST00000527237 COA1Q9GZY4 146 aa22.76■■□□□ 1.23
TRIM3-205ENST00000527237 USP17L3A6NCW0 530 aa22.75■■□□□ 1.23
TRIM3-205ENST00000527237 USP17L4A6NCW7 530 aa22.75■■□□□ 1.23
TRIM3-205ENST00000527237 USP17L1Q7RTZ2 530 aa22.75■■□□□ 1.23
TRIM3-205ENST00000527237 RIPOR2Q9Y4F9 1068 aa22.75■■□□□ 1.23
TRIM3-205ENST00000527237 TRAF5O00463 557 aa22.74■■□□□ 1.23
TRIM3-205ENST00000527237 GMLQ99445 158 aa22.74■■□□□ 1.23
TRIM3-205ENST00000527237 H7C1D1 291 aa22.73■■□□□ 1.23
TRIM3-205ENST00000527237 IPO8O15397 1037 aaKnown RBP22.73■■□□□ 1.23
TRIM3-205ENST00000527237 DACT2Q5SW24 774 aa22.73■■□□□ 1.23
TRIM3-205ENST00000527237 C15orf52Q6ZUT6 534 aaKnown RBP22.73■■□□□ 1.23
TRIM3-205ENST00000527237 CD209Q9NNX6 404 aa22.73■■□□□ 1.23
TRIM3-205ENST00000527237 KIF4BQ2VIQ3 1234 aa22.72■■□□□ 1.23
TRIM3-205ENST00000527237 RBM26Q5T8P6 1007 aaKnown RBP22.72■■□□□ 1.23
TRIM3-205ENST00000527237 ZKSCAN2Q63HK3 967 aa22.72■■□□□ 1.23
TRIM3-205ENST00000527237 TMEM57Q8N5G2 664 aa22.72■■□□□ 1.23
TRIM3-205ENST00000527237 GLIS2Q9BZE0 524 aaPredicted RBP22.72■■□□□ 1.23
TRIM3-205ENST00000527237 ASTN2O75129 1339 aaPredicted RBP22.72■■□□□ 1.23
TRIM3-205ENST00000527237 PTPN12Q05209 780 aaKnown RBP22.71■■□□□ 1.23
TRIM3-205ENST00000527237 VGLL2Q8N8G2 317 aa22.71■■□□□ 1.23
TRIM3-205ENST00000527237 AGBL3Q8NEM8 1001 aa22.71■■□□□ 1.23
TRIM3-205ENST00000527237 KLRG1Q96E93 195 aa22.71■■□□□ 1.23
TRIM3-205ENST00000527237 MROH5Q6ZUA9 1318 aa22.71■■□□□ 1.23
TRIM3-205ENST00000527237 GTF2IP78347 998 aa22.7■■□□□ 1.22
TRIM3-205ENST00000527237 METTL24Q5JXM2 366 aa22.7■■□□□ 1.22
TRIM3-205ENST00000527237 DLK2Q6UY11 383 aa22.7■■□□□ 1.22
TRIM3-205ENST00000527237 CREBZFQ9NS37 354 aa22.7■■□□□ 1.22
TRIM3-205ENST00000527237 JAG2Q9Y219 1238 aa22.7■■□□□ 1.22
TRIM3-205ENST00000527237 RLBP1P12271 317 aa22.69■■□□□ 1.22
TRIM3-205ENST00000527237 GYG1P46976 350 aa22.69■■□□□ 1.22
TRIM3-205ENST00000527237 ZNF280AP59817 542 aaPredicted RBP22.69■■□□□ 1.22
TRIM3-205ENST00000527237 STRIP1Q5VSL9 837 aa22.69■■□□□ 1.22
TRIM3-205ENST00000527237 ZNF804AQ7Z570 1209 aa22.69■■□□□ 1.22
TRIM3-205ENST00000527237 SIL1Q9H173 461 aa22.69■■□□□ 1.22
TRIM3-205ENST00000527237 PGAP2Q9UHJ9 254 aa22.69■■□□□ 1.22
TRIM3-205ENST00000527237 PA2G4Q9UQ80 394 aaKnown RBP22.69■■□□□ 1.22
TRIM3-205ENST00000527237 THSD7BQ9C0I4 1608 aa22.68■■□□□ 1.22
TRIM3-205ENST00000527237 UBE4AQ14139 1066 aa22.68■■□□□ 1.22
TRIM3-205ENST00000527237 TMEM88BA6NKF7 163 aa22.67■■□□□ 1.22
TRIM3-205ENST00000527237 EYA2O00167 538 aa22.67■■□□□ 1.22
TRIM3-205ENST00000527237 USP17L8P0C7I0 530 aa22.67■■□□□ 1.22
TRIM3-205ENST00000527237 IL1R1P14778 569 aa22.67■■□□□ 1.22
TRIM3-205ENST00000527237 TTLL5Q6EMB2 1281 aa22.67■■□□□ 1.22
TRIM3-205ENST00000527237 ATG9AQ7Z3C6 839 aa22.67■■□□□ 1.22
TRIM3-205ENST00000527237 CERS5Q8N5B7 392 aa22.67■■□□□ 1.22
TRIM3-205ENST00000527237 MKRN1Q9UHC7 482 aaKnown RBP22.67■■□□□ 1.22
TRIM3-205ENST00000527237 PDE8BO95263 885 aa22.66■■□□□ 1.22
TRIM3-205ENST00000527237 GNAI3P08754 354 aa22.66■■□□□ 1.22
TRIM3-205ENST00000527237 ZC3H15Q8WU90 426 aaKnown RBP22.66■■□□□ 1.22
TRIM3-205ENST00000527237 MYOZ2Q9NPC6 264 aa22.66■■□□□ 1.22
TRIM3-205ENST00000527237 GGA3Q9NZ52 723 aa22.66■■□□□ 1.22
TRIM3-205ENST00000527237 MYO3BQ8WXR4 1341 aa22.65■■□□□ 1.22
TRIM3-205ENST00000527237 PCNTO95613 3336 aa22.65■■□□□ 1.22
TRIM3-205ENST00000527237 ADM5C9JUS6 153 aa22.65■■□□□ 1.22
TRIM3-205ENST00000527237 KIAA0825Q8IV33 1275 aa22.65■■□□□ 1.22
TRIM3-205ENST00000527237 FAM84BQ96KN1 310 aaPredicted RBP22.65■■□□□ 1.22
TRIM3-205ENST00000527237 CNTNAP1P78357 1384 aa22.64■■□□□ 1.22
TRIM3-205ENST00000527237 IQSEC3Q9UPP2 1182 aaPredicted RBP22.64■■□□□ 1.21
TRIM3-205ENST00000527237 COL1A1P02452 1464 aaPredicted RBP22.63■■□□□ 1.21
TRIM3-205ENST00000527237 CST9Q5W186 159 aa22.63■■□□□ 1.21
TRIM3-205ENST00000527237 USP48Q86UV5 1035 aa22.63■■□□□ 1.21
TRIM3-205ENST00000527237 FTSJ3Q8IY81 847 aaKnown RBP22.63■■□□□ 1.21
TRIM3-205ENST00000527237 DZIP1LQ8IYY4 767 aaKnown RBP22.63■■□□□ 1.21
TRIM3-205ENST00000527237 SCAF8Q9UPN6 1271 aaKnown RBP22.63■■□□□ 1.21
TRIM3-205ENST00000527237 FGFR2P21802 821 aa22.62■■□□□ 1.21
TRIM3-205ENST00000527237 HIBADHP31937 336 aaKnown RBP22.62■■□□□ 1.21
TRIM3-205ENST00000527237 ANGEL2Q5VTE6 544 aaKnown RBP22.62■■□□□ 1.21
TRIM3-205ENST00000527237 TDRD7Q8NHU6 1098 aaKnown RBP22.62■■□□□ 1.21
TRIM3-205ENST00000527237 PANK1Q8TE04 598 aa22.62■■□□□ 1.21
TRIM3-205ENST00000527237 C1orf115Q9H7X2 142 aa22.62■■□□□ 1.21
TRIM3-205ENST00000527237 SRGAP3O43295 1099 aa22.61■■□□□ 1.21
TRIM3-205ENST00000527237 SASH1O94885 1247 aa22.61■■□□□ 1.21
TRIM3-205ENST00000527237 GNAI2P04899 355 aa22.61■■□□□ 1.21
TRIM3-205ENST00000527237 MTX1Q13505 466 aa22.61■■□□□ 1.21
TRIM3-205ENST00000527237 SCARF1Q14162 830 aa22.61■■□□□ 1.21
TRIM3-205ENST00000527237 PUM3Q15397 648 aaKnown RBP22.61■■□□□ 1.21
TRIM3-205ENST00000527237 NBPF9Q3BBW0 867 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms