RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 SMC3Q9UQE7 1217 aa18.9■□□□□ 0.62
FOXRED1-207ENST00000527004 SLC10A5Q5PT55 438 aa18.89■□□□□ 0.61
FOXRED1-207ENST00000527004 MCTP1Q6DN14 999 aa18.89■□□□□ 0.61
FOXRED1-207ENST00000527004 OSBP2Q969R2 916 aa18.89■□□□□ 0.61
FOXRED1-207ENST00000527004 CDC5LQ99459 802 aaKnown RBP18.89■□□□□ 0.61
FOXRED1-207ENST00000527004 ATRNO75882 1429 aa18.89■□□□□ 0.61
FOXRED1-207ENST00000527004 LAMB2P55268 1798 aa18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 ME3Q16798 604 aa18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 KLHL40Q2TBA0 621 aa18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 SEC31BQ9NQW1 1179 aa18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 CTNNA3Q9UI47 895 aa18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 TPCN1Q9ULQ1 816 aa18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 TAF6LQ9Y6J9 622 aa18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 AFF2P51816 1311 aa18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 LARGE1O95461 756 aa18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 NYXQ9GZU5 481 aa18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 ISY1Q9ULR0 285 aaKnown RBP18.88■□□□□ 0.61
FOXRED1-207ENST00000527004 M0R2C6 588 aa18.87■□□□□ 0.61
FOXRED1-207ENST00000527004 TOB2Q14106 344 aaPredicted RBP18.87■□□□□ 0.61
FOXRED1-207ENST00000527004 LARP6Q9BRS8 491 aaKnown RBP18.87■□□□□ 0.61
FOXRED1-207ENST00000527004 LMBRD1Q9NUN5 540 aa18.87■□□□□ 0.61
FOXRED1-207ENST00000527004 UBE3CQ15386 1083 aa18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 WASHC4Q2M389 1173 aa18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 SLFNL1Q499Z3 407 aa18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 CCDC83Q8IWF9 413 aa18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 BCL2L12Q9HB09 334 aa18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 RTCBQ9Y3I0 505 aaKnown RBP18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 BTAF1O14981 1849 aa18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 ADD2P35612 726 aa18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 PHKA1P46020 1223 aa18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 KCNQ4P56696 695 aa18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 ERFEQ4G0M1 354 aa18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 L1TD1Q5T7N2 865 aaKnown RBP18.86■□□□□ 0.61
FOXRED1-207ENST00000527004 GNPATO15228 680 aa18.85■□□□□ 0.61
FOXRED1-207ENST00000527004 ZPR1O75312 459 aa18.85■□□□□ 0.61
FOXRED1-207ENST00000527004 PI16Q6UXB8 463 aa18.85■□□□□ 0.61
FOXRED1-207ENST00000527004 DHX32Q7L7V1 743 aaKnown RBP18.85■□□□□ 0.61
FOXRED1-207ENST00000527004 HELBQ8NG08 1087 aaPredicted RBP18.85■□□□□ 0.61
FOXRED1-207ENST00000527004 GZF1Q9H116 711 aaPredicted RBP18.85■□□□□ 0.61
FOXRED1-207ENST00000527004 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
FOXRED1-207ENST00000527004 SCN7AQ01118 1682 aa18.85■□□□□ 0.61
FOXRED1-207ENST00000527004 ARAP2Q8WZ64 1704 aa18.84■□□□□ 0.61
FOXRED1-207ENST00000527004 STX6O43752 255 aa18.84■□□□□ 0.61
FOXRED1-207ENST00000527004 ST3GAL1Q11201 340 aa18.84■□□□□ 0.61
FOXRED1-207ENST00000527004 TBC1D9BQ66K14 1250 aa18.84■□□□□ 0.61
FOXRED1-207ENST00000527004 SEPT12Q8IYM1 358 aa18.84■□□□□ 0.61
FOXRED1-207ENST00000527004 SETDB2Q96T68 719 aa18.84■□□□□ 0.61
FOXRED1-207ENST00000527004 FSD2A1L4K1 749 aa18.83■□□□□ 0.61
FOXRED1-207ENST00000527004 ZSCAN22P10073 491 aaPredicted RBP18.83■□□□□ 0.61
FOXRED1-207ENST00000527004 SYT1P21579 422 aa18.83■□□□□ 0.61
FOXRED1-207ENST00000527004 GJB2P29033 226 aa18.83■□□□□ 0.61
FOXRED1-207ENST00000527004 CHRNDQ07001 517 aa18.83■□□□□ 0.61
FOXRED1-207ENST00000527004 ANKRD18AQ8IVF6 992 aa18.83■□□□□ 0.61
FOXRED1-207ENST00000527004 SPATA5Q8NB90 893 aa18.83■□□□□ 0.61
FOXRED1-207ENST00000527004 PUS7LQ9H0K6 701 aaKnown RBP18.83■□□□□ 0.61
FOXRED1-207ENST00000527004 ATP6V1DQ9Y5K8 247 aa18.83■□□□□ 0.61
FOXRED1-207ENST00000527004 GTF2E1P29083 439 aaPredicted RBP18.83■□□□□ 0.6
FOXRED1-207ENST00000527004 COL9A3Q14050 684 aaPredicted RBP18.83■□□□□ 0.6
FOXRED1-207ENST00000527004 SLC9C2Q5TAH2 1124 aa18.83■□□□□ 0.6
FOXRED1-207ENST00000527004 STOX1Q6ZVD7 989 aa18.83■□□□□ 0.6
FOXRED1-207ENST00000527004 BCL11BQ9C0K0 894 aaPredicted RBP18.83■□□□□ 0.6
FOXRED1-207ENST00000527004 BSDC1Q9NW68 430 aaPredicted RBP18.83■□□□□ 0.6
FOXRED1-207ENST00000527004 GOLGA6L3A6NEY3 463 aa18.82■□□□□ 0.6
FOXRED1-207ENST00000527004 E7EWF7 191 aa18.82■□□□□ 0.6
FOXRED1-207ENST00000527004 PRPF40AO75400 957 aaKnown RBP18.82■□□□□ 0.6
FOXRED1-207ENST00000527004 EXOSC10Q01780 885 aaKnown RBP18.82■□□□□ 0.6
FOXRED1-207ENST00000527004 IMMTQ16891 758 aaKnown RBP18.82■□□□□ 0.6
FOXRED1-207ENST00000527004 FAM182BQ5T319 152 aa18.82■□□□□ 0.6
FOXRED1-207ENST00000527004 FBXL16Q8N461 479 aa18.82■□□□□ 0.6
FOXRED1-207ENST00000527004 AGXT2Q9BYV1 514 aa18.82■□□□□ 0.6
FOXRED1-207ENST00000527004 PIH1D3Q9NQM4 214 aaKnown RBP18.82■□□□□ 0.6
FOXRED1-207ENST00000527004 GPAA1O43292 621 aa18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 PDCP20941 246 aa18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 TPTE2Q6XPS3 522 aa18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 Q6ZUG5 572 aa18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 TCEANC2Q96MN5 208 aa18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 AKAP11Q9UKA4 1901 aa18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 FOXP2O15409 715 aa18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 UBE4AQ14139 1066 aa18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 FOXD4L5Q5VV16 416 aaPredicted RBP18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 NECAB1Q8N987 351 aa18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 FOXD4L4Q8WXT5 416 aaPredicted RBP18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 ARHGEF1Q92888 912 aaKnown RBP18.81■□□□□ 0.6
FOXRED1-207ENST00000527004 LY75O60449 1722 aa18.8■□□□□ 0.6
FOXRED1-207ENST00000527004 IDH1O75874 414 aaKnown RBP18.8■□□□□ 0.6
FOXRED1-207ENST00000527004 FGAP02671 866 aa18.8■□□□□ 0.6
FOXRED1-207ENST00000527004 MAP3K12Q12852 859 aa18.8■□□□□ 0.6
FOXRED1-207ENST00000527004 RASGRF1Q13972 1273 aa18.8■□□□□ 0.6
FOXRED1-207ENST00000527004 BICDL1Q6ZP65 573 aa18.8■□□□□ 0.6
FOXRED1-207ENST00000527004 ILDR2Q71H61 639 aa18.8■□□□□ 0.6
FOXRED1-207ENST00000527004 CHMP4CQ96CF2 233 aa18.8■□□□□ 0.6
FOXRED1-207ENST00000527004 NLRP3Q96P20 1036 aa18.8■□□□□ 0.6
FOXRED1-207ENST00000527004 F13A1P00488 732 aa18.79■□□□□ 0.6
FOXRED1-207ENST00000527004 PDE6AP16499 860 aa18.79■□□□□ 0.6
FOXRED1-207ENST00000527004 ADRA2BP18089 450 aa18.79■□□□□ 0.6
FOXRED1-207ENST00000527004 TRAPPC3LQ5T215 181 aa18.79■□□□□ 0.6
FOXRED1-207ENST00000527004 NBPF5PQ86XG9 351 aaPredicted RBP18.79■□□□□ 0.6
FOXRED1-207ENST00000527004 GTF3C6Q969F1 213 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms