RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 FAM182BQ5T319 152 aa8.47□□□□□ -1.05
ATPAF1-208ENST00000526821 TMEM132EQ6IEE7 984 aa8.47□□□□□ -1.05
ATPAF1-208ENST00000526821 STAG2Q8N3U4 1231 aa8.47□□□□□ -1.05
ATPAF1-208ENST00000526821 SCG3Q8WXD2 468 aaKnown RBP8.47□□□□□ -1.05
ATPAF1-208ENST00000526821 PRR12Q9ULL5 1215 aa8.47□□□□□ -1.05
ATPAF1-208ENST00000526821 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
ATPAF1-208ENST00000526821 TMF1P82094 1093 aa8.46□□□□□ -1.06
ATPAF1-208ENST00000526821 CTBSQ01459 385 aa8.46□□□□□ -1.06
ATPAF1-208ENST00000526821 TNP2Q05952 138 aa8.46□□□□□ -1.06
ATPAF1-208ENST00000526821 KANK3Q6NY19 840 aa8.46□□□□□ -1.06
ATPAF1-208ENST00000526821 LRRC69Q6ZNQ3 347 aa8.46□□□□□ -1.06
ATPAF1-208ENST00000526821 BEND7Q8N7W2 519 aaPredicted RBP8.46□□□□□ -1.06
ATPAF1-208ENST00000526821 MARK1Q9P0L2 795 aa8.46□□□□□ -1.06
ATPAF1-208ENST00000526821 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.06
ATPAF1-208ENST00000526821 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.06
ATPAF1-208ENST00000526821 CEP170BQ9Y4F5 1589 aaPredicted RBP8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 ARAFP10398 606 aa8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 GALNT6Q8NCL4 622 aa8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 FAM200AQ8TCP9 573 aa8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 VTI1AQ96AJ9 217 aa8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 CCDC97Q96F63 343 aaPredicted RBP8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 PHACTR1Q9C0D0 580 aa8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 AVENQ9NQS1 362 aaPredicted RBP8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 CENPJQ9HC77 1338 aaPredicted RBP8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 ARHGEF28Q8N1W1 1705 aaKnown RBP8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 PLEKHG1Q9ULL1 1385 aa8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 ADAMTS13Q76LX8 1427 aa8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 MED14O60244 1454 aa8.45□□□□□ -1.06
ATPAF1-208ENST00000526821 DLC1Q96QB1 1528 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 ZNF142P52746 1687 aaPredicted RBP8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 PIK3R2O00459 728 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 DKK1O94907 266 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 CD33P20138 364 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 AMPD1P23109 780 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 ADH6P28332 368 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 LTKP29376 864 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 SLCO4C1Q6ZQN7 724 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 THEMISQ8N1K5 641 aaPredicted RBP8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 TMEM151AQ8N4L1 468 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 EDARADDQ8WWZ3 215 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 TRAK1Q9UPV9 953 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 LRPPRCP42704 1394 aaKnown RBP8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 ABCC11Q96J66 1382 aa8.44□□□□□ -1.06
ATPAF1-208ENST00000526821 CCER2I3L3R5 266 aa8.43□□□□□ -1.06
ATPAF1-208ENST00000526821 ANP32CO43423 234 aa8.43□□□□□ -1.06
ATPAF1-208ENST00000526821 IGFBP4P22692 258 aa8.43□□□□□ -1.06
ATPAF1-208ENST00000526821 CDCA8Q53HL2 280 aa8.43□□□□□ -1.06
ATPAF1-208ENST00000526821 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATPAF1-208ENST00000526821 GGA1Q9UJY5 639 aa8.43□□□□□ -1.06
ATPAF1-208ENST00000526821 DNMT3AQ9Y6K1 912 aaPredicted RBP8.43□□□□□ -1.06
ATPAF1-208ENST00000526821 SETD1BQ9UPS6 1966 aaKnown RBP8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 GDF11O95390 407 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 IRS1P35568 1242 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 SH3PXD2AQ5TCZ1 1133 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 POTEAQ6S8J7 498 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 TXNDC2Q86VQ3 553 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 ALDH16A1Q8IZ83 802 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 NGLY1Q96IV0 654 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 PUS7Q96PZ0 661 aaKnown RBP8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 C2orf49Q9BVC5 232 aaPredicted RBP8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 RRAGCQ9HB90 399 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 METP08581 1390 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 TECPR2O15040 1411 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 QRICH2Q9H0J4 1663 aa8.42□□□□□ -1.06
ATPAF1-208ENST00000526821 C2CD2LO14523 706 aa8.41□□□□□ -1.06
ATPAF1-208ENST00000526821 RASSF7Q02833 373 aa8.41□□□□□ -1.06
ATPAF1-208ENST00000526821 CEP63Q96MT8 703 aa8.41□□□□□ -1.06
ATPAF1-208ENST00000526821 PRKRIP1Q9H875 184 aaPredicted RBP8.41□□□□□ -1.06
ATPAF1-208ENST00000526821 SERPINA10Q9UK55 444 aa8.41□□□□□ -1.06
ATPAF1-208ENST00000526821 EID1Q9Y6B2 187 aa8.41□□□□□ -1.06
ATPAF1-208ENST00000526821 MYOM1P52179 1685 aa8.4□□□□□ -1.06
ATPAF1-208ENST00000526821 TULP4Q9NRJ4 1543 aa8.4□□□□□ -1.06
ATPAF1-208ENST00000526821 NEURL1BA8MQ27 555 aa8.4□□□□□ -1.06
ATPAF1-208ENST00000526821 EFSO43281 561 aa8.4□□□□□ -1.06
ATPAF1-208ENST00000526821 C21orf2O43822 256 aa8.4□□□□□ -1.06
ATPAF1-208ENST00000526821 POLR3GLQ9BT43 218 aa8.4□□□□□ -1.06
ATPAF1-208ENST00000526821 MKL2Q9ULH7 1088 aa8.4□□□□□ -1.06
ATPAF1-208ENST00000526821 NOVA2Q9UNW9 492 aaKnown RBP8.4□□□□□ -1.06
ATPAF1-208ENST00000526821 KNDC1Q76NI1 1749 aa8.4□□□□□ -1.07
ATPAF1-208ENST00000526821 DIP2AQ14689 1571 aa8.39□□□□□ -1.07
ATPAF1-208ENST00000526821 CPS1P31327 1500 aa8.39□□□□□ -1.07
ATPAF1-208ENST00000526821 FAM135BQ49AJ0 1406 aa8.39□□□□□ -1.07
ATPAF1-208ENST00000526821 FOXO3O43524 673 aa8.39□□□□□ -1.07
ATPAF1-208ENST00000526821 RTN1Q16799 776 aa8.39□□□□□ -1.07
ATPAF1-208ENST00000526821 ZNF468Q5VIY5 522 aaPredicted RBP8.39□□□□□ -1.07
ATPAF1-208ENST00000526821 SUSD3Q96L08 255 aa8.39□□□□□ -1.07
ATPAF1-208ENST00000526821 STK26Q9P289 416 aa8.39□□□□□ -1.07
ATPAF1-208ENST00000526821 TBX22Q9Y458 520 aa8.39□□□□□ -1.07
ATPAF1-208ENST00000526821 EPXP11678 715 aa8.38□□□□□ -1.07
ATPAF1-208ENST00000526821 ALAS2P22557 587 aa8.38□□□□□ -1.07
ATPAF1-208ENST00000526821 HSH2DQ96JZ2 352 aa8.38□□□□□ -1.07
ATPAF1-208ENST00000526821 PRAM1Q96QH2 718 aa8.38□□□□□ -1.07
ATPAF1-208ENST00000526821 PANK3Q9H999 370 aa8.38□□□□□ -1.07
ATPAF1-208ENST00000526821 BRD7Q9NPI1 651 aa8.38□□□□□ -1.07
ATPAF1-208ENST00000526821 PTPRUQ92729 1446 aa8.37□□□□□ -1.07
ATPAF1-208ENST00000526821 KTN1Q86UP2 1357 aaKnown RBP8.37□□□□□ -1.07
ATPAF1-208ENST00000526821 PLEKHH1Q9ULM0 1364 aa8.37□□□□□ -1.07
ATPAF1-208ENST00000526821 EVC2Q86UK5 1308 aa8.37□□□□□ -1.07
ATPAF1-208ENST00000526821 SWI5Q1ZZU3 235 aa8.37□□□□□ -1.07
ATPAF1-208ENST00000526821 ARXQ96QS3 562 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms