RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 NR1I2O75469 434 aa24.03■■□□□ 1.44
SMIM3-201ENST00000526627 PCCAP05165 728 aaPredicted RBP24.03■■□□□ 1.44
SMIM3-201ENST00000526627 CSF1RP07333 972 aa24.03■■□□□ 1.44
SMIM3-201ENST00000526627 NAA16Q6N069 864 aaPredicted RBP24.03■■□□□ 1.44
SMIM3-201ENST00000526627 ASAP1Q9ULH1 1129 aa24.03■■□□□ 1.44
SMIM3-201ENST00000526627 NWD2Q9ULI1 1742 aa24.03■■□□□ 1.44
SMIM3-201ENST00000526627 FKBP4Q02790 459 aaKnown RBP eCLIP24.02■■□□□ 1.44
SMIM3-201ENST00000526627 CKAP2LQ8IYA6 745 aa24.02■■□□□ 1.44
SMIM3-201ENST00000526627 FAM89AQ96GI7 184 aa24.02■■□□□ 1.44
SMIM3-201ENST00000526627 SCARF1Q14162 830 aa24.02■■□□□ 1.44
SMIM3-201ENST00000526627 PIBF1Q8WXW3 757 aa24.02■■□□□ 1.44
SMIM3-201ENST00000526627 CCT2P78371 535 aaKnown RBP24.01■■□□□ 1.43
SMIM3-201ENST00000526627 PIGBQ92521 554 aa24.01■■□□□ 1.43
SMIM3-201ENST00000526627 CCDC85AQ96PX6 553 aaPredicted RBP24.01■■□□□ 1.43
SMIM3-201ENST00000526627 NCOA5Q9HCD5 579 aaKnown RBP24.01■■□□□ 1.43
SMIM3-201ENST00000526627 ZNF330Q9Y3S2 320 aaPredicted RBP24.01■■□□□ 1.43
SMIM3-201ENST00000526627 PDIA3P30101 505 aaKnown RBP24.01■■□□□ 1.43
SMIM3-201ENST00000526627 EVA1CP58658 441 aa24.01■■□□□ 1.43
SMIM3-201ENST00000526627 CCDC158Q5M9N0 1113 aa24.01■■□□□ 1.43
SMIM3-201ENST00000526627 CHST3Q7LGC8 479 aa24.01■■□□□ 1.43
SMIM3-201ENST00000526627 AKAP2Q9Y2D5 859 aa24.01■■□□□ 1.43
SMIM3-201ENST00000526627 HMGN5P82970 282 aaKnown RBP24■■□□□ 1.43
SMIM3-201ENST00000526627 PLCB2Q00722 1185 aa24■■□□□ 1.43
SMIM3-201ENST00000526627 TTC39AQ5SRH9 613 aa24■■□□□ 1.43
SMIM3-201ENST00000526627 ZBTB38Q8NAP3 1195 aaPredicted RBP24■■□□□ 1.43
SMIM3-201ENST00000526627 ZNF274Q96GC6 653 aaPredicted RBP24■■□□□ 1.43
SMIM3-201ENST00000526627 VSIG10Q8N0Z9 540 aa24■■□□□ 1.43
SMIM3-201ENST00000526627 FBXL16Q8N461 479 aa24■■□□□ 1.43
SMIM3-201ENST00000526627 RIC1Q4ADV7 1423 aa23.99■■□□□ 1.43
SMIM3-201ENST00000526627 SYNE4Q8N205 404 aa23.99■■□□□ 1.43
SMIM3-201ENST00000526627 BICD2Q8TD16 824 aa23.99■■□□□ 1.43
SMIM3-201ENST00000526627 CFAP45Q9UL16 551 aa23.99■■□□□ 1.43
SMIM3-201ENST00000526627 RRP9O43818 475 aaKnown RBP23.99■■□□□ 1.43
SMIM3-201ENST00000526627 EVCP57679 992 aa23.99■■□□□ 1.43
SMIM3-201ENST00000526627 LUZP1Q86V48 1076 aa23.99■■□□□ 1.43
SMIM3-201ENST00000526627 FOSBP53539 338 aa23.98■■□□□ 1.43
SMIM3-201ENST00000526627 KIF6Q6ZMV9 814 aa23.98■■□□□ 1.43
SMIM3-201ENST00000526627 TEX13AQ9BXU3 409 aaPredicted RBP23.98■■□□□ 1.43
SMIM3-201ENST00000526627 CBX8Q9HC52 389 aa23.98■■□□□ 1.43
SMIM3-201ENST00000526627 RCOR1Q9UKL0 485 aa23.98■■□□□ 1.43
SMIM3-201ENST00000526627 ZAP70P43403 619 aa23.98■■□□□ 1.43
SMIM3-201ENST00000526627 ANO6Q4KMQ2 910 aa23.98■■□□□ 1.43
SMIM3-201ENST00000526627 FTOQ9C0B1 505 aaKnown RBP eCLIP23.98■■□□□ 1.43
SMIM3-201ENST00000526627 GPHNQ9NQX3 736 aaPredicted RBP23.98■■□□□ 1.43
SMIM3-201ENST00000526627 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.98■■□□□ 1.43
SMIM3-201ENST00000526627 GORABQ5T7V8 394 aa23.97■■□□□ 1.43
SMIM3-201ENST00000526627 STRCQ7RTU9 1775 aa23.97■■□□□ 1.43
SMIM3-201ENST00000526627 MAP3K15Q6ZN16 1313 aa23.97■■□□□ 1.43
SMIM3-201ENST00000526627 ZFYP08048 801 aaPredicted RBP23.96■■□□□ 1.43
SMIM3-201ENST00000526627 IFIT5Q13325 482 aaKnown RBP23.96■■□□□ 1.43
SMIM3-201ENST00000526627 NOLC1Q14978 699 aaKnown RBP eCLIP23.96■■□□□ 1.43
SMIM3-201ENST00000526627 HLFQ16534 295 aa23.96■■□□□ 1.43
SMIM3-201ENST00000526627 C17orf53Q8N3J3 647 aaPredicted RBP23.96■■□□□ 1.43
SMIM3-201ENST00000526627 KCNF1Q9H3M0 494 aa23.96■■□□□ 1.43
SMIM3-201ENST00000526627 RIPOR2Q9Y4F9 1068 aa23.96■■□□□ 1.43
SMIM3-201ENST00000526627 HSP90AA2PQ14568 343 aaPredicted RBP23.96■■□□□ 1.43
SMIM3-201ENST00000526627 PI16Q6UXB8 463 aa23.96■■□□□ 1.43
SMIM3-201ENST00000526627 GIGYF2Q6Y7W6 1299 aaKnown RBP23.96■■□□□ 1.43
SMIM3-201ENST00000526627 ILDR1Q86SU0 546 aaPredicted RBP23.96■■□□□ 1.43
SMIM3-201ENST00000526627 ITGB4P16144 1822 aa23.96■■□□□ 1.43
SMIM3-201ENST00000526627 ABCC12Q96J65 1359 aa23.96■■□□□ 1.43
SMIM3-201ENST00000526627 UQCRHLA0A096LP55 91 aa23.95■■□□□ 1.43
SMIM3-201ENST00000526627 UQCRHP07919 91 aa23.95■■□□□ 1.43
SMIM3-201ENST00000526627 FDPSP14324 419 aaKnown RBP23.95■■□□□ 1.43
SMIM3-201ENST00000526627 CEBPZQ03701 1054 aaKnown RBP23.95■■□□□ 1.43
SMIM3-201ENST00000526627 SASS6Q6UVJ0 657 aa23.95■■□□□ 1.43
SMIM3-201ENST00000526627 PUS7LQ9H0K6 701 aaKnown RBP23.95■■□□□ 1.43
SMIM3-201ENST00000526627 SPTLC3Q9NUV7 552 aa23.95■■□□□ 1.43
SMIM3-201ENST00000526627 CDHR2Q9BYE9 1310 aa23.95■■□□□ 1.42
SMIM3-201ENST00000526627 PPFIA3O75145 1194 aa23.95■■□□□ 1.42
SMIM3-201ENST00000526627 FGAP02671 866 aa23.95■■□□□ 1.42
SMIM3-201ENST00000526627 WASHC4Q2M389 1173 aa23.95■■□□□ 1.42
SMIM3-201ENST00000526627 LRRFIP1Q32MZ4 808 aaKnown RBP23.95■■□□□ 1.42
SMIM3-201ENST00000526627 TAF7LQ5H9L4 462 aa23.95■■□□□ 1.42
SMIM3-201ENST00000526627 APPBP2Q92624 585 aa23.95■■□□□ 1.42
SMIM3-201ENST00000526627 USP28Q96RU2 1077 aa23.95■■□□□ 1.42
SMIM3-201ENST00000526627 CTNNA3Q9UI47 895 aa23.95■■□□□ 1.42
SMIM3-201ENST00000526627 ZNF335Q9H4Z2 1342 aaPredicted RBP23.95■■□□□ 1.42
SMIM3-201ENST00000526627 HAND2P61296 217 aa23.94■■□□□ 1.42
SMIM3-201ENST00000526627 KIF3AQ9Y496 699 aa23.94■■□□□ 1.42
SMIM3-201ENST00000526627 CARMIL3Q8ND23 1372 aa23.94■■□□□ 1.42
SMIM3-201ENST00000526627 MYH7P12883 1935 aa23.94■■□□□ 1.42
SMIM3-201ENST00000526627 AKAP11Q9UKA4 1901 aa23.94■■□□□ 1.42
SMIM3-201ENST00000526627 STARD3NLO95772 234 aa23.94■■□□□ 1.42
SMIM3-201ENST00000526627 HSP90AB3PQ58FF7 597 aa23.94■■□□□ 1.42
SMIM3-201ENST00000526627 NLRP10Q86W26 655 aa23.94■■□□□ 1.42
SMIM3-201ENST00000526627 NAP1L2Q9ULW6 460 aaPredicted RBP23.94■■□□□ 1.42
SMIM3-201ENST00000526627 DDX60Q8IY21 1712 aaKnown RBP23.93■■□□□ 1.42
SMIM3-201ENST00000526627 MB21D2Q8IYB1 491 aaPredicted RBP23.93■■□□□ 1.42
SMIM3-201ENST00000526627 TTLL11Q8NHH1 800 aa23.93■■□□□ 1.42
SMIM3-201ENST00000526627 SLC4A9Q96Q91 983 aa23.93■■□□□ 1.42
SMIM3-201ENST00000526627 SPC24Q8NBT2 197 aa23.93■■□□□ 1.42
SMIM3-201ENST00000526627 TDRD7Q8NHU6 1098 aaKnown RBP23.93■■□□□ 1.42
SMIM3-201ENST00000526627 GOLPH3LQ9H4A5 285 aa23.93■■□□□ 1.42
SMIM3-201ENST00000526627 GREM2Q9H772 168 aa23.93■■□□□ 1.42
SMIM3-201ENST00000526627 GPTP24298 496 aa23.92■■□□□ 1.42
SMIM3-201ENST00000526627 GUCY1B3Q02153 619 aa23.92■■□□□ 1.42
SMIM3-201ENST00000526627 ATP2B3Q16720 1220 aa23.92■■□□□ 1.42
SMIM3-201ENST00000526627 IMMTQ16891 758 aaKnown RBP23.92■■□□□ 1.42
SMIM3-201ENST00000526627 ITGA6P23229 1130 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms