RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 TACC3Q9Y6A5 838 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 SMIM23A6NLE4 172 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 CCDC152Q4G0S7 254 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 TBC1D2Q9BYX2 928 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 RBM27Q9P2N5 1060 aaKnown RBP10.64□□□□□ -0.71
CTNND1-213ENST00000526357 LUC7L2Q9Y383 392 aaKnown RBP10.64□□□□□ -0.71
CTNND1-213ENST00000526357 GBP1P32455 592 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 RARSP54136 660 aaKnown RBP10.64□□□□□ -0.71
CTNND1-213ENST00000526357 NOLC1Q14978 699 aaKnown RBP eCLIP10.64□□□□□ -0.71
CTNND1-213ENST00000526357 ZNF622Q969S3 477 aaKnown RBP eCLIP10.64□□□□□ -0.713e-7■□□□□ 10.1
CTNND1-213ENST00000526357 FAM114A2Q9NRY5 505 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 VPS18Q9P253 973 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
CTNND1-213ENST00000526357 GEN1Q17RS7 908 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 CCDC26Q8TAB7 109 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 EPSTI1Q96J88 318 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 RAB3IPQ96QF0 476 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-213ENST00000526357 STX8Q9UNK0 236 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 RTL9Q8NET4 1388 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 NEDD9Q14511 834 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 KRT79Q5XKE5 535 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 HS2ST1Q7LGA3 356 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 FAM76AQ8TAV0 307 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 IFT81Q8WYA0 676 aa10.64□□□□□ -0.71
CTNND1-213ENST00000526357 GPTP24298 496 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 CNGA1P29973 690 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 ARID5AQ03989 594 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 GIMAP6Q6P9H5 292 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 LMNTD2Q8IXW0 634 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 SSH1Q8WYL5 1049 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 HAUS7Q99871 368 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 CCDC61Q9Y6R9 512 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 EXOC5O00471 708 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 UBXN1Q04323 297 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 CCDC25Q86WR0 208 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 RAB11FIP4Q86YS3 637 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 CAPZA3Q96KX2 299 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 NAP1L4Q99733 375 aaKnown RBP10.63□□□□□ -0.71
CTNND1-213ENST00000526357 CASKIN1Q8WXD9 1431 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 SLC4A8Q2Y0W8 1093 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 FAM204AQ9H8W3 233 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 CPSF2Q9P2I0 782 aaKnown RBP10.63□□□□□ -0.71
CTNND1-213ENST00000526357 SLC4A4Q9Y6R1 1079 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 F6X3S4 739 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 ZEB2O60315 1214 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 SETSIPP0DME0 302 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 GBP6Q6ZN66 633 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
CTNND1-213ENST00000526357 RRP36Q96EU6 259 aaKnown RBP10.63□□□□□ -0.71
CTNND1-213ENST00000526357 CACYBPQ9HB71 228 aaKnown RBP10.63□□□□□ -0.71
CTNND1-213ENST00000526357 SPDYE3A6NKU9 549 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 AOPEPQ8N6M6 819 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 UBLCP1Q8WVY7 318 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-213ENST00000526357 KIFAP3Q92845 792 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 FGD5Q6ZNL6 1462 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 E7EVH7 732 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 CALML3P27482 149 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 RFC4P35249 363 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 NUF2Q9BZD4 464 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 TLDC2A0PJX2 215 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 RASA3Q14644 834 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 TBC1D9Q6ZT07 1266 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 KIFC2Q96AC6 838 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 ZBTB3Q9H5J0 574 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 USH1CQ9Y6N9 552 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 C9orf84Q5VXU9 1444 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 HCLS1P14317 486 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-213ENST00000526357 CYP7A1P22680 504 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 TTC22Q5TAA0 569 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 SNRKQ9NRH2 765 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 RTL1A6NKG5 1358 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 PIK3R4Q99570 1358 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 GIGYF1O75420 1035 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-213ENST00000526357 ERCC5P28715 1186 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-213ENST00000526357 KRT2P35908 639 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 SEPT14Q6ZU15 432 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 AGTPBP1Q9UPW5 1226 aa10.62□□□□□ -0.71
CTNND1-213ENST00000526357 SLC8A3P57103 927 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 FLIIQ13045 1269 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 BMP2KLQ5H9B9 411 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 HDXQ7Z353 690 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 THUMPD2Q9BTF0 503 aaKnown RBP10.61□□□□□ -0.71
CTNND1-213ENST00000526357 ZMYND15Q9H091 742 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 VCXQ9H320 206 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 STK10O94804 968 aaKnown RBP10.61□□□□□ -0.71
CTNND1-213ENST00000526357 NAA25Q14CX7 972 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 B4GALNT4Q76KP1 1039 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 CCDC186Q7Z3E2 898 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 DHX58Q96C10 678 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 LRPPRCP42704 1394 aaKnown RBP10.61□□□□□ -0.71
CTNND1-213ENST00000526357 RPL13P26373 211 aaKnown RBP10.61□□□□□ -0.71
CTNND1-213ENST00000526357 TRPC3Q13507 836 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 WDR44Q5JSH3 913 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 GKAP1Q5VSY0 366 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-213ENST00000526357 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.61□□□□□ -0.716e-14■□□□□ 9.9
CTNND1-213ENST00000526357 GUCA1BQ9UMX6 200 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 HSPA1LP34931 641 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 ITIH3Q06033 890 aa10.61□□□□□ -0.71
CTNND1-213ENST00000526357 UAP1Q16222 522 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-213ENST00000526357 ZNF569Q5MCW4 686 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms