RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 TREML1Q86YW5 311 aa4.68□□□□□ -1.66
TRAPPC4-207ENST00000526141 GALNT11Q8NCW6 608 aa4.68□□□□□ -1.66
TRAPPC4-207ENST00000526141 TFIP11Q9UBB9 837 aaKnown RBP4.68□□□□□ -1.66
TRAPPC4-207ENST00000526141 FAM196BA6NMK8 535 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 CDC27P30260 824 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 WEE1P30291 646 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 HYAL2Q12891 473 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 ANKMY2Q8IV38 441 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 FAM20CQ8IXL6 584 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 SHKBP1Q8TBC3 707 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 GLMNQ92990 594 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 KCNF1Q9H3M0 494 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 FAM13BQ9NYF5 915 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 ANGEL1Q9UNK9 670 aaKnown RBP4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 USP20Q9Y2K6 914 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 HIF3AQ9Y2N7 669 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 MAFBQ9Y5Q3 323 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 KCNMB2Q9Y691 235 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 IVNS1ABPQ9Y6Y0 642 aa4.67□□□□□ -1.66
TRAPPC4-207ENST00000526141 FSCN2O14926 492 aa4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 LGR5O75473 907 aa4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 WISP1O95388 367 aa4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 BMP3P12645 472 aa4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 JAG1P78504 1218 aa4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 CRTC2Q53ET0 693 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 CEP135Q66GS9 1140 aa4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 ANKRD34AQ69YU3 496 aa4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 KIAA1211Q6ZU35 1233 aa4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 BEND4Q6ZU67 534 aa4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 ASIC4Q96FT7 647 aa4.66□□□□□ -1.66
TRAPPC4-207ENST00000526141 WDR64B1ANS9 1081 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L15C9J2P7 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L10C9JJH3 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L13C9JLJ4 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L12C9JPN9 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L11C9JVI0 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L21D6R901 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L18D6R9N7 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L22D6RA61 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L17D6RBQ6 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L19D6RCP7 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L20D6RJB6 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 USP17L24Q0WX57 530 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 CPSF6Q16630 551 aaKnown RBP eCLIP4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 OR13H1Q8NG92 308 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 LACRTQ9GZZ8 138 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 VRTNQ9H8Y1 702 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 SEC31BQ9NQW1 1179 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 IGSF5Q9NSI5 407 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 ATG3Q9NT62 314 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 KCNK4Q9NYG8 393 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 PIM2Q9P1W9 311 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 LRFN2Q9ULH4 789 aa4.65□□□□□ -1.67
TRAPPC4-207ENST00000526141 SCNN1AP37088 669 aa4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 KANK4Q5T7N3 995 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 TTC39BQ5VTQ0 682 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 OGFOD2Q6N063 350 aa4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 TXNDC11Q6PKC3 985 aa4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 ABI1Q8IZP0 508 aa4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 PIK3R5Q8WYR1 880 aa4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 WNT8BQ93098 351 aa4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 FBXL18Q96ME1 805 aa4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 CARD10Q9BWT7 1032 aa4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 RNF208Q9H0X6 261 aa4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 FNDC3AQ9Y2H6 1198 aaKnown RBP4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 LEMD3Q9Y2U8 911 aa4.64□□□□□ -1.67
TRAPPC4-207ENST00000526141 RBM47A0AV96 593 aaKnown RBP4.63□□□□□ -1.67
TRAPPC4-207ENST00000526141 UBAP1LF5GYI3 381 aa4.63□□□□□ -1.67
TRAPPC4-207ENST00000526141 JUNBP17275 347 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC4-207ENST00000526141 PTPRAP18433 802 aa4.63□□□□□ -1.67
TRAPPC4-207ENST00000526141 BRD2P25440 801 aaKnown RBP4.63□□□□□ -1.67
TRAPPC4-207ENST00000526141 CDC25BP30305 580 aa4.63□□□□□ -1.67
TRAPPC4-207ENST00000526141 CABP4P57796 275 aa4.63□□□□□ -1.67
TRAPPC4-207ENST00000526141 FDX2Q6P4F2 183 aa4.63□□□□□ -1.67
TRAPPC4-207ENST00000526141 FAM177A1Q8N128 213 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC4-207ENST00000526141 POU5F2Q8N7G0 328 aa4.63□□□□□ -1.67
TRAPPC4-207ENST00000526141 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 UNCXA6NJT0 531 aa4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 TM4SF5O14894 197 aa4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 GAS2O43903 313 aaKnown RBP4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 PIP4K2BP78356 416 aa4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 SRPK2P78362 688 aaKnown RBP4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 ATP11AP98196 1134 aa4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 COX20Q5RI15 118 aa4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 KLHDC7BQ96G42 594 aa4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 PPP1R12CQ9BZL4 782 aa4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 OSGEPQ9NPF4 335 aa4.62□□□□□ -1.67
TRAPPC4-207ENST00000526141 H3BRJ5 948 aa4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 DDX3YO15523 660 aaKnown RBP4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 KIF4AO95239 1232 aa4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 C8AP07357 584 aa4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 FOSL1P15407 271 aa4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 CANXP27824 592 aaKnown RBP4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 HOXA10P31260 410 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 PREPP48147 710 aa4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 ARL4DP49703 201 aa4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 CFAP70Q5T0N1 1121 aa4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 B4GALNT3Q6L9W6 998 aa4.61□□□□□ -1.67
TRAPPC4-207ENST00000526141 VSIG10LQ86VR7 867 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms