RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 PLEKHF1Q96S99 279 aa9.26□□□□□ -0.93
SSH3-204ENST00000525913 MXD3Q9BW11 206 aa9.26□□□□□ -0.93
SSH3-204ENST00000525913 SEC31BQ9NQW1 1179 aa9.26□□□□□ -0.93
SSH3-204ENST00000525913 ANGEL1Q9UNK9 670 aaKnown RBP9.26□□□□□ -0.93
SSH3-204ENST00000525913 ZBTB48P10074 688 aaPredicted RBP9.25□□□□□ -0.93
SSH3-204ENST00000525913 NF2P35240 595 aa9.25□□□□□ -0.93
SSH3-204ENST00000525913 MNX1P50219 401 aaPredicted RBP9.25□□□□□ -0.93
SSH3-204ENST00000525913 DACT2Q5SW24 774 aa9.25□□□□□ -0.93
SSH3-204ENST00000525913 CLMNQ96JQ2 1002 aa9.25□□□□□ -0.93
SSH3-204ENST00000525913 CFAP53Q96M91 514 aa9.25□□□□□ -0.93
SSH3-204ENST00000525913 GGA1Q9UJY5 639 aa9.25□□□□□ -0.93
SSH3-204ENST00000525913 PTCH2Q9Y6C5 1203 aa9.25□□□□□ -0.93
SSH3-204ENST00000525913 UNC80Q8N2C7 3258 aa9.25□□□□□ -0.93
SSH3-204ENST00000525913 ZSWIM8A7E2V4 1837 aa9.24□□□□□ -0.93
SSH3-204ENST00000525913 G3V3G9 751 aa9.24□□□□□ -0.93
SSH3-204ENST00000525913 SOX1O00570 391 aaPredicted RBP9.24□□□□□ -0.93
SSH3-204ENST00000525913 DCAF8Q5TAQ9 597 aa9.24□□□□□ -0.93
SSH3-204ENST00000525913 ANKIB1Q9P2G1 1089 aa9.24□□□□□ -0.93
SSH3-204ENST00000525913 ATP5J2-PTCD1G3V325 749 aa9.23□□□□□ -0.93
SSH3-204ENST00000525913 IRS4O14654 1257 aaPredicted RBP9.23□□□□□ -0.93
SSH3-204ENST00000525913 SASH1O94885 1247 aa9.23□□□□□ -0.93
SSH3-204ENST00000525913 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
SSH3-204ENST00000525913 SLC4A8Q2Y0W8 1093 aa9.23□□□□□ -0.93
SSH3-204ENST00000525913 RTL5Q5HYW3 569 aaPredicted RBP9.23□□□□□ -0.93
SSH3-204ENST00000525913 UBE2Q1Q7Z7E8 422 aa9.23□□□□□ -0.93
SSH3-204ENST00000525913 NBPF11Q86T75 865 aa9.23□□□□□ -0.93
SSH3-204ENST00000525913 SHISA4Q96DD7 197 aa9.23□□□□□ -0.93
SSH3-204ENST00000525913 SSC5DA1L4H1 1573 aa9.23□□□□□ -0.93
SSH3-204ENST00000525913 ECM29Q5VYK3 1845 aa9.22□□□□□ -0.93
SSH3-204ENST00000525913 UNCXA6NJT0 531 aa9.22□□□□□ -0.93
SSH3-204ENST00000525913 USP2O75604 605 aaPredicted RBP9.22□□□□□ -0.93
SSH3-204ENST00000525913 TRIM28Q13263 835 aaKnown RBP9.22□□□□□ -0.93
SSH3-204ENST00000525913 NFE2L2Q16236 605 aa9.22□□□□□ -0.93
SSH3-204ENST00000525913 SLC9C1Q4G0N8 1177 aa9.22□□□□□ -0.93
SSH3-204ENST00000525913 ANKRD13DQ6ZTN6 518 aa9.22□□□□□ -0.93
SSH3-204ENST00000525913 PLBD2Q8NHP8 589 aa9.22□□□□□ -0.93
SSH3-204ENST00000525913 DPF3Q92784 378 aa9.22□□□□□ -0.93
SSH3-204ENST00000525913 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
SSH3-204ENST00000525913 DEFB129Q9H1M3 183 aa9.22□□□□□ -0.93
SSH3-204ENST00000525913 TSPYL4Q9UJ04 414 aa9.22□□□□□ -0.93
SSH3-204ENST00000525913 CUL9Q8IWT3 2517 aa9.21□□□□□ -0.94
SSH3-204ENST00000525913 MYCP01106 439 aaPredicted RBP9.21□□□□□ -0.94
SSH3-204ENST00000525913 ATP2B4P23634 1241 aa9.21□□□□□ -0.94
SSH3-204ENST00000525913 MMP14P50281 582 aa9.21□□□□□ -0.94
SSH3-204ENST00000525913 STRIP1Q5VSL9 837 aa9.21□□□□□ -0.94
SSH3-204ENST00000525913 OTUD7BQ6GQQ9 843 aa9.21□□□□□ -0.94
SSH3-204ENST00000525913 APOBEC3FQ8IUX4 373 aaKnown RBP9.21□□□□□ -0.94
SSH3-204ENST00000525913 OGFOD1Q8N543 542 aa9.21□□□□□ -0.94
SSH3-204ENST00000525913 SH3TC2Q8TF17 1288 aa9.21□□□□□ -0.94
SSH3-204ENST00000525913 LRCH3Q96II8 777 aa9.21□□□□□ -0.94
SSH3-204ENST00000525913 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.21□□□□□ -0.94
SSH3-204ENST00000525913 MTFR1Q15390 333 aa9.2□□□□□ -0.94
SSH3-204ENST00000525913 KRT24Q2M2I5 525 aa9.2□□□□□ -0.94
SSH3-204ENST00000525913 TXNRD3Q86VQ6 643 aa9.2□□□□□ -0.94
SSH3-204ENST00000525913 BABAM1Q9NWV8 329 aa9.2□□□□□ -0.94
SSH3-204ENST00000525913 PCDHAC2Q9Y5I4 1007 aa9.2□□□□□ -0.94
SSH3-204ENST00000525913 XDHP47989 1333 aa9.2□□□□□ -0.94
SSH3-204ENST00000525913 MYO3BQ8WXR4 1341 aa9.2□□□□□ -0.94
SSH3-204ENST00000525913 CLSPNQ9HAW4 1339 aa9.2□□□□□ -0.94
SSH3-204ENST00000525913 OTOFQ9HC10 1997 aa9.19□□□□□ -0.94
SSH3-204ENST00000525913 A0A1W2PPC1 479 aa9.19□□□□□ -0.94
SSH3-204ENST00000525913 ZBTB7BO15156 539 aaPredicted RBP9.19□□□□□ -0.94
SSH3-204ENST00000525913 PPP1R12BO60237 982 aaPredicted RBP9.19□□□□□ -0.94
SSH3-204ENST00000525913 NBPF12Q5TAG4 269 aaPredicted RBP9.19□□□□□ -0.94
SSH3-204ENST00000525913 TTLL5Q6EMB2 1281 aa9.19□□□□□ -0.94
SSH3-204ENST00000525913 ZBTB38Q8NAP3 1195 aaPredicted RBP9.19□□□□□ -0.94
SSH3-204ENST00000525913 COL25A1Q9BXS0 654 aaPredicted RBP9.19□□□□□ -0.94
SSH3-204ENST00000525913 ARHGAP39Q9C0H5 1083 aa9.19□□□□□ -0.94
SSH3-204ENST00000525913 CHPF2Q9P2E5 772 aa9.19□□□□□ -0.94
SSH3-204ENST00000525913 MED23Q9ULK4 1368 aa9.19□□□□□ -0.94
SSH3-204ENST00000525913 COL1A1P02452 1464 aaPredicted RBP9.19□□□□□ -0.94
SSH3-204ENST00000525913 CTGFP29279 349 aa9.18□□□□□ -0.94
SSH3-204ENST00000525913 AOX1Q06278 1338 aa9.18□□□□□ -0.94
SSH3-204ENST00000525913 ARHGEF6Q15052 776 aa9.18□□□□□ -0.94
SSH3-204ENST00000525913 KIAA0825Q8IV33 1275 aa9.18□□□□□ -0.94
SSH3-204ENST00000525913 MTMR14Q8NCE2 650 aa9.18□□□□□ -0.94
SSH3-204ENST00000525913 BRI3BPQ8WY22 251 aa9.18□□□□□ -0.94
SSH3-204ENST00000525913 ALPK3Q96L96 1907 aa9.18□□□□□ -0.94
SSH3-204ENST00000525913 SPEF2Q9C093 1822 aa9.18□□□□□ -0.94
SSH3-204ENST00000525913 COA1Q9GZY4 146 aa9.18□□□□□ -0.94
SSH3-204ENST00000525913 MINPP1Q9UNW1 487 aa9.18□□□□□ -0.94
SSH3-204ENST00000525913 VCANP13611 3396 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 PDE8AO60658 829 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 GJA8P48165 433 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 SUPT20HL1Q3ZLR7 823 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 CCDC152Q4G0S7 254 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 ANKRD13AQ8IZ07 590 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 FAM43AQ8N2R8 423 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 CNKSR2Q8WXI2 1034 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 JARID2Q92833 1246 aaPredicted RBP9.17□□□□□ -0.94
SSH3-204ENST00000525913 OPTNQ96CV9 577 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 PRMT6Q96LA8 375 aaPredicted RBP9.17□□□□□ -0.94
SSH3-204ENST00000525913 CCDC85AQ96PX6 553 aaPredicted RBP9.17□□□□□ -0.94
SSH3-204ENST00000525913 ZFYVE28Q9HCC9 887 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 PPP2R3BQ9Y5P8 575 aa9.17□□□□□ -0.94
SSH3-204ENST00000525913 ZNF804BA4D1E1 1349 aa9.16□□□□□ -0.94
SSH3-204ENST00000525913 CCT4P50991 539 aaKnown RBP9.16□□□□□ -0.94
SSH3-204ENST00000525913 LACTBP83111 547 aaPredicted RBP9.16□□□□□ -0.94
SSH3-204ENST00000525913 TAF1CQ15572 869 aaPredicted RBP9.16□□□□□ -0.94
SSH3-204ENST00000525913 GPR153Q6NV75 609 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms