RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 UBR3Q6ZT12 1888 aa7.87□□□□□ -1.15
CCDC90B-204ENST00000525504 TUBGCP6Q96RT7 1819 aa7.87□□□□□ -1.15
CCDC90B-204ENST00000525504 KLRG2A4D1S0 409 aaPredicted RBP7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 H0YIN7 160 aa7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 NEFMP07197 916 aa7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 GCGRP47871 477 aa7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 EIF4A1P60842 406 aaKnown RBP7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 DDX10Q13206 875 aaKnown RBP7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 C9orf131Q5VYM1 1079 aa7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 PRR5LQ6MZQ0 368 aa7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 C2CD5Q86YS7 1000 aa7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 TTLL6Q8N841 843 aa7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 SETDB2Q96T68 719 aa7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 TAF1LQ8IZX4 1826 aa7.86□□□□□ -1.15
CCDC90B-204ENST00000525504 CICQ96RK0 1608 aaPredicted RBP7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 ERVV-1B6SEH8 477 aa7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 ADAM23O75077 832 aa7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 PDE6BP35913 854 aa7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 SCARF1Q14162 830 aa7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 GRIPAP1Q4V328 841 aa7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 BICDL1Q6ZP65 573 aa7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 METTL3Q86U44 580 aaKnown RBP7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 DZIP3Q86Y13 1208 aaKnown RBP7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 DAXXQ9UER7 740 aaPredicted RBP7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 CEP350Q5VT06 3117 aa7.85□□□□□ -1.15
CCDC90B-204ENST00000525504 MYH14Q7Z406 1995 aaKnown RBP7.84□□□□□ -1.15
CCDC90B-204ENST00000525504 KRTAP9-6A0A140TA67 174 aa7.84□□□□□ -1.15
CCDC90B-204ENST00000525504 SRGNP10124 158 aa7.84□□□□□ -1.15
CCDC90B-204ENST00000525504 TMPOP42166 694 aaKnown RBP7.84□□□□□ -1.15
CCDC90B-204ENST00000525504 PRELPP51888 382 aa7.84□□□□□ -1.15
CCDC90B-204ENST00000525504 MRPL14Q6P1L8 145 aaKnown RBP7.84□□□□□ -1.15
CCDC90B-204ENST00000525504 NPM2Q86SE8 214 aaKnown RBP7.84□□□□□ -1.15
CCDC90B-204ENST00000525504 C7orf43Q8WVR3 580 aa7.84□□□□□ -1.15
CCDC90B-204ENST00000525504 THUMPD2Q9BTF0 503 aaKnown RBP7.84□□□□□ -1.15
CCDC90B-204ENST00000525504 CARMIL3Q8ND23 1372 aa7.84□□□□□ -1.16
CCDC90B-204ENST00000525504 MYBBP1AQ9BQG0 1328 aaKnown RBP7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 CHL1O00533 1208 aa7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 PIP4K2AP48426 406 aaPredicted RBP7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 RIPK4P57078 832 aa7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 HLFQ16534 295 aa7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 STYK1Q6J9G0 422 aa7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 TPTE2Q6XPS3 522 aa7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 LRP10Q7Z4F1 713 aa7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 CNBD1Q8NA66 436 aa7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 CNKSR1Q969H4 720 aa7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 ZNF652Q9Y2D9 606 aa7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 ZNF330Q9Y3S2 320 aaPredicted RBP7.83□□□□□ -1.16
CCDC90B-204ENST00000525504 MAPK8IP3Q9UPT6 1336 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 ZC3H4Q9UPT8 1303 aaKnown RBP7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 SENP3-EIF4A1A0A087X0R7 540 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 DDX11L8A8MPP1 907 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 NFKBIEO00221 500 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 TOMM70O94826 608 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 C4AP0C0L4 1744 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 HSPA6P17066 643 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 LMNB1P20700 586 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 COL5A3P25940 1745 aaPredicted RBP7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 NBPF5PQ86XG9 351 aaPredicted RBP7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 CCDC24Q8N4L8 307 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 ZNF526Q8TF50 670 aaPredicted RBP7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 RUNDC1Q96C34 613 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 MASTLQ96GX5 879 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 PRKRIP1Q9H875 184 aaPredicted RBP7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 SCN11AQ9UI33 1791 aa7.82□□□□□ -1.16
CCDC90B-204ENST00000525504 LTBP3Q9NS15 1303 aa7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 TJP1Q07157 1748 aa7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 SOBPA7XYQ1 873 aa7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 PPFIA3O75145 1194 aa7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 IRS1P35568 1242 aa7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 LMOD3Q0VAK6 560 aa7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 ZNF622Q969S3 477 aaKnown RBP eCLIP7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 NMRK2Q9NPI5 230 aa7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 RNF181Q9P0P0 153 aa7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 TSPYL4Q9UJ04 414 aa7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 NIP7Q9Y221 180 aaKnown RBP eCLIP7.81□□□□□ -1.16
CCDC90B-204ENST00000525504 MAP3K15Q6ZN16 1313 aa7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 GLTPD2A6NH11 291 aa7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 C21orf2O43822 256 aa7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 NPR1P16066 1061 aa7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 HOXA10P31260 410 aaPredicted RBP7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 ST5P78524 1137 aa7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 CRY2Q49AN0 593 aa7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 SLC10A5Q5PT55 438 aa7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 TTLL7Q6ZT98 887 aa7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 SULF1Q8IWU6 871 aa7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 ZNF34Q8IZ26 560 aa7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 USB1Q9BQ65 265 aaKnown RBP7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 RRP7AQ9Y3A4 280 aaKnown RBP7.8□□□□□ -1.16
CCDC90B-204ENST00000525504 KDM2BQ8NHM5 1336 aa7.79□□□□□ -1.16
CCDC90B-204ENST00000525504 ZNF853P0CG23 659 aa7.79□□□□□ -1.16
CCDC90B-204ENST00000525504 KRT76Q01546 638 aa7.79□□□□□ -1.16
CCDC90B-204ENST00000525504 SOGA3Q5TF21 947 aa7.79□□□□□ -1.16
CCDC90B-204ENST00000525504 PRPF40BQ6NWY9 871 aaKnown RBP7.79□□□□□ -1.16
CCDC90B-204ENST00000525504 GIGYF2Q6Y7W6 1299 aaKnown RBP7.79□□□□□ -1.16
CCDC90B-204ENST00000525504 DNAJC5GQ8N7S2 189 aa7.79□□□□□ -1.16
CCDC90B-204ENST00000525504 HOXB7P09629 217 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 VEGFAP15692 232 aaPredicted RBP7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 ALDH1B1P30837 517 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 FSTL1Q12841 308 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms