RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 COA1Q9GZY4 146 aa23.24■■□□□ 1.31
TSPAN4-215ENST00000525334 ZNF609O15014 1411 aa23.24■■□□□ 1.31
TSPAN4-215ENST00000525334 IPO8O15397 1037 aaKnown RBP23.23■■□□□ 1.31
TSPAN4-215ENST00000525334 UBTFL1P0CB47 393 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-215ENST00000525334 HIRAP54198 1017 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-215ENST00000525334 RSBN1LQ6PCB5 846 aaPredicted RBP23.23■■□□□ 1.31
TSPAN4-215ENST00000525334 IRS2Q9Y4H2 1338 aa23.23■■□□□ 1.31
TSPAN4-215ENST00000525334 USP17L3A6NCW0 530 aa23.22■■□□□ 1.31
TSPAN4-215ENST00000525334 USP17L4A6NCW7 530 aa23.22■■□□□ 1.31
TSPAN4-215ENST00000525334 PLIN1O60240 522 aa23.22■■□□□ 1.31
TSPAN4-215ENST00000525334 TRIM27P14373 513 aa23.22■■□□□ 1.31
TSPAN4-215ENST00000525334 INTS3Q68E01 1043 aaKnown RBP23.22■■□□□ 1.31
TSPAN4-215ENST00000525334 USP17L1Q7RTZ2 530 aa23.22■■□□□ 1.31
TSPAN4-215ENST00000525334 TNNQ9UQP3 1299 aa23.22■■□□□ 1.31
TSPAN4-215ENST00000525334 ZNF646O15015 1829 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-215ENST00000525334 TMEM88BA6NKF7 163 aa23.21■■□□□ 1.31
TSPAN4-215ENST00000525334 ATF7IPQ6VMQ6 1270 aa23.21■■□□□ 1.31
TSPAN4-215ENST00000525334 SAMD7Q7Z3H4 446 aa23.21■■□□□ 1.31
TSPAN4-215ENST00000525334 PGAP2Q9UHJ9 254 aa23.21■■□□□ 1.31
TSPAN4-215ENST00000525334 C15orf52Q6ZUT6 534 aaKnown RBP23.2■■□□□ 1.3
TSPAN4-215ENST00000525334 AGBL3Q8NEM8 1001 aa23.2■■□□□ 1.3
TSPAN4-215ENST00000525334 MEIS3Q99687 375 aa23.2■■□□□ 1.3
TSPAN4-215ENST00000525334 RIPOR2Q9Y4F9 1068 aa23.2■■□□□ 1.3
TSPAN4-215ENST00000525334 EGFRP00533 1210 aa23.19■■□□□ 1.3
TSPAN4-215ENST00000525334 TBC1D10BQ4KMP7 808 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-215ENST00000525334 KLHDC4Q8TBB5 520 aa23.19■■□□□ 1.3
TSPAN4-215ENST00000525334 ZC3H15Q8WU90 426 aaKnown RBP23.19■■□□□ 1.3
TSPAN4-215ENST00000525334 GMLQ99445 158 aa23.19■■□□□ 1.3
TSPAN4-215ENST00000525334 MROH5Q6ZUA9 1318 aa23.18■■□□□ 1.3
TSPAN4-215ENST00000525334 LRRC24Q50LG9 513 aa23.18■■□□□ 1.3
TSPAN4-215ENST00000525334 DACT2Q5SW24 774 aa23.18■■□□□ 1.3
TSPAN4-215ENST00000525334 FBXW7Q969H0 707 aa23.18■■□□□ 1.3
TSPAN4-215ENST00000525334 CD209Q9NNX6 404 aa23.18■■□□□ 1.3
TSPAN4-215ENST00000525334 LRRFIP2Q9Y608 721 aaKnown RBP23.18■■□□□ 1.3
TSPAN4-215ENST00000525334 RFX5P48382 616 aaPredicted RBP23.17■■□□□ 1.3
TSPAN4-215ENST00000525334 RBM26Q5T8P6 1007 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-215ENST00000525334 STRIP1Q5VSL9 837 aa23.17■■□□□ 1.3
TSPAN4-215ENST00000525334 ZKSCAN2Q63HK3 967 aa23.17■■□□□ 1.3
TSPAN4-215ENST00000525334 CLUAP1Q96AJ1 413 aa23.17■■□□□ 1.3
TSPAN4-215ENST00000525334 MXD3Q9BW11 206 aa23.17■■□□□ 1.3
TSPAN4-215ENST00000525334 PCNTO95613 3336 aa23.17■■□□□ 1.3
TSPAN4-215ENST00000525334 TRAF5O00463 557 aa23.16■■□□□ 1.3
TSPAN4-215ENST00000525334 ZNF280AP59817 542 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-215ENST00000525334 FMR1Q06787 632 aaKnown RBP eCLIP23.16■■□□□ 1.3
TSPAN4-215ENST00000525334 KIF4BQ2VIQ3 1234 aa23.16■■□□□ 1.3
TSPAN4-215ENST00000525334 ZNF804AQ7Z570 1209 aa23.16■■□□□ 1.3
TSPAN4-215ENST00000525334 MKRN1Q9UHC7 482 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-215ENST00000525334 HDAC5Q9UQL6 1122 aa23.16■■□□□ 1.3
TSPAN4-215ENST00000525334 USP17L8P0C7I0 530 aa23.15■■□□□ 1.3
TSPAN4-215ENST00000525334 UBE4AQ14139 1066 aa23.15■■□□□ 1.3
TSPAN4-215ENST00000525334 METTL24Q5JXM2 366 aa23.15■■□□□ 1.3
TSPAN4-215ENST00000525334 GLIS2Q9BZE0 524 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-215ENST00000525334 MYO3BQ8WXR4 1341 aa23.14■■□□□ 1.3
TSPAN4-215ENST00000525334 GTF2IP78347 998 aa23.14■■□□□ 1.29
TSPAN4-215ENST00000525334 PTPN12Q05209 780 aaKnown RBP23.14■■□□□ 1.29
TSPAN4-215ENST00000525334 TTLL5Q6EMB2 1281 aa23.14■■□□□ 1.29
TSPAN4-215ENST00000525334 GNAI3P08754 354 aa23.13■■□□□ 1.29
TSPAN4-215ENST00000525334 IL1R1P14778 569 aa23.13■■□□□ 1.29
TSPAN4-215ENST00000525334 CST9Q5W186 159 aa23.13■■□□□ 1.29
TSPAN4-215ENST00000525334 VGLL2Q8N8G2 317 aa23.13■■□□□ 1.29
TSPAN4-215ENST00000525334 CNTNAP1P78357 1384 aa23.13■■□□□ 1.29
TSPAN4-215ENST00000525334 EYA2O00167 538 aa23.12■■□□□ 1.29
TSPAN4-215ENST00000525334 TMEM57Q8N5G2 664 aa23.12■■□□□ 1.29
TSPAN4-215ENST00000525334 MYOZ2Q9NPC6 264 aa23.12■■□□□ 1.29
TSPAN4-215ENST00000525334 TRPM7Q96QT4 1865 aa23.11■■□□□ 1.29
TSPAN4-215ENST00000525334 PDE8BO95263 885 aa23.11■■□□□ 1.29
TSPAN4-215ENST00000525334 GYG1P46976 350 aa23.11■■□□□ 1.29
TSPAN4-215ENST00000525334 CDC37L1Q7L3B6 337 aa23.11■■□□□ 1.29
TSPAN4-215ENST00000525334 ASTN2O75129 1339 aaPredicted RBP23.1■■□□□ 1.29
TSPAN4-215ENST00000525334 RASSF10A6NK89 507 aa23.1■■□□□ 1.29
TSPAN4-215ENST00000525334 DEFB115Q30KQ5 88 aa23.1■■□□□ 1.29
TSPAN4-215ENST00000525334 VEGFBP49765 207 aa23.09■■□□□ 1.29
TSPAN4-215ENST00000525334 ATG9AQ7Z3C6 839 aa23.09■■□□□ 1.29
TSPAN4-215ENST00000525334 FAM84BQ96KN1 310 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-215ENST00000525334 SIL1Q9H173 461 aa23.09■■□□□ 1.29
TSPAN4-215ENST00000525334 GGA3Q9NZ52 723 aa23.09■■□□□ 1.29
TSPAN4-215ENST00000525334 HIBADHP31937 336 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 SCARF1Q14162 830 aa23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 KRT26Q7Z3Y9 468 aa23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 USP48Q86UV5 1035 aa23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 KIAA0825Q8IV33 1275 aa23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 FTSJ3Q8IY81 847 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 OGFOD1Q8N543 542 aa23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 CERS5Q8N5B7 392 aa23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 DCPSQ96C86 337 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 FBXO3Q9UK99 471 aa23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 ABT1Q9ULW3 272 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 JAG2Q9Y219 1238 aa23.08■■□□□ 1.29
TSPAN4-215ENST00000525334 CIAO1O76071 339 aa23.07■■□□□ 1.28
TSPAN4-215ENST00000525334 PUM3Q15397 648 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-215ENST00000525334 DLK2Q6UY11 383 aa23.07■■□□□ 1.28
TSPAN4-215ENST00000525334 DZIP1LQ8IYY4 767 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-215ENST00000525334 TDRD7Q8NHU6 1098 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-215ENST00000525334 PA2G4Q9UQ80 394 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-215ENST00000525334 ADM5C9JUS6 153 aa23.06■■□□□ 1.28
TSPAN4-215ENST00000525334 SASH1O94885 1247 aa23.06■■□□□ 1.28
TSPAN4-215ENST00000525334 CELF2O95319 508 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-215ENST00000525334 GNAI2P04899 355 aa23.06■■□□□ 1.28
TSPAN4-215ENST00000525334 RLBP1P12271 317 aa23.06■■□□□ 1.28
TSPAN4-215ENST00000525334 FGFR2P21802 821 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms