RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 KCNJ4P48050 445 aa14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 TAF7LQ5H9L4 462 aa14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 IRS2Q9Y4H2 1338 aa14.09□□□□□ -0.15
TRAPPC4-204ENST00000524797 TAF5LO75529 589 aa14.08□□□□□ -0.16
TRAPPC4-204ENST00000524797 ZNF280AP59817 542 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-204ENST00000524797 KIF4BQ2VIQ3 1234 aa14.08□□□□□ -0.16
TRAPPC4-204ENST00000524797 RBM26Q5T8P6 1007 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-204ENST00000524797 HELBQ8NG08 1087 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC4-204ENST00000524797 RASSF10A6NK89 507 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 RABL6Q3YEC7 729 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 DACT2Q5SW24 774 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 CST9Q5W186 159 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 C15orf52Q6ZUT6 534 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 ANKRD44Q8N8A2 993 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 BICC1Q9H694 974 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 THSD7BQ9C0I4 1608 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 SNAP23O00161 211 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 VEGFBP49765 207 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 LDHAL6AQ6ZMR3 332 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 USP48Q86UV5 1035 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 USP44Q9H0E7 712 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 CNNM1Q9NRU3 951 aa14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 ABT1Q9ULW3 272 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 NOB1Q9ULX3 412 aaKnown RBP14.07□□□□□ -0.16
TRAPPC4-204ENST00000524797 DEFB115Q30KQ5 88 aa14.06□□□□□ -0.16
TRAPPC4-204ENST00000524797 FBXW7Q969H0 707 aa14.06□□□□□ -0.16
TRAPPC4-204ENST00000524797 MXD3Q9BW11 206 aa14.06□□□□□ -0.16
TRAPPC4-204ENST00000524797 CELF2O95319 508 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 USP17L8P0C7I0 530 aa14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 HSPA1AP0DMV8 641 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 HSPA1BP0DMV9 641 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 RARSP54136 660 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 STRIP1Q5VSL9 837 aa14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 PUS3Q9BZE2 481 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 PLIN1O60240 522 aa14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 API5Q9BZZ5 524 aaKnown RBP14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 CD209Q9NNX6 404 aa14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 TLL2Q9Y6L7 1015 aa14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 MYO3BQ8WXR4 1341 aa14.05□□□□□ -0.16
TRAPPC4-204ENST00000524797 DCPSQ96C86 337 aaKnown RBP14.04□□□□□ -0.16
TRAPPC4-204ENST00000524797 MYOZ2Q9NPC6 264 aa14.04□□□□□ -0.16
TRAPPC4-204ENST00000524797 ASTN2O75129 1339 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC4-204ENST00000524797 ARAP2Q8WZ64 1704 aa14.04□□□□□ -0.16
TRAPPC4-204ENST00000524797 ECM29Q5VYK3 1845 aa14.04□□□□□ -0.16
TRAPPC4-204ENST00000524797 ADM5C9JUS6 153 aa14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 TTLL5Q6EMB2 1281 aa14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 DLK2Q6UY11 383 aa14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 KRT26Q7Z3Y9 468 aa14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 ZNF408Q9H9D4 720 aa14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 GGA3Q9NZ52 723 aa14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 RIPOR2Q9Y4F9 1068 aa14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 GTF2IP78347 998 aa14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 SCARF1Q14162 830 aa14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 ZNF804AQ7Z570 1209 aa14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 WDR33Q9C0J8 1336 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-204ENST00000524797 IL1R1P14778 569 aa14.02□□□□□ -0.16
TRAPPC4-204ENST00000524797 HNRNPUQ00839 825 aaKnown RBP eCLIP14.02□□□□□ -0.16
TRAPPC4-204ENST00000524797 UBE4AQ14139 1066 aa14.02□□□□□ -0.16
TRAPPC4-204ENST00000524797 MROH5Q6ZUA9 1318 aa14.02□□□□□ -0.16
TRAPPC4-204ENST00000524797 KIF16BQ96L93 1317 aa14.02□□□□□ -0.17
TRAPPC4-204ENST00000524797 LRRC24Q50LG9 513 aa14.02□□□□□ -0.17
TRAPPC4-204ENST00000524797 ARHGAP45Q92619 1136 aa14.02□□□□□ -0.17
TRAPPC4-204ENST00000524797 CAPNS2Q96L46 248 aa14.02□□□□□ -0.17
TRAPPC4-204ENST00000524797 ANGEL2Q5VTE6 544 aaKnown RBP14.01□□□□□ -0.17
TRAPPC4-204ENST00000524797 CYP4F22Q6NT55 531 aa14.01□□□□□ -0.17
TRAPPC4-204ENST00000524797 SAPCD2Q86UD0 394 aa14.01□□□□□ -0.17
TRAPPC4-204ENST00000524797 MYH13Q9UKX3 1938 aa14.01□□□□□ -0.17
TRAPPC4-204ENST00000524797 PITPNM2Q9BZ72 1349 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 UBTFL1P0CB47 393 aaPredicted RBP14□□□□□ -0.17
TRAPPC4-204ENST00000524797 ECE1P42892 770 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 RFX5P48382 616 aaPredicted RBP14□□□□□ -0.17
TRAPPC4-204ENST00000524797 MMP14P50281 582 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 PAXIP1Q6ZW49 1069 aaPredicted RBP14□□□□□ -0.17
TRAPPC4-204ENST00000524797 SULF1Q8IWU6 871 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 KLHDC4Q8TBB5 520 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 FKBP1AP62942 108 aaKnown RBP14□□□□□ -0.17
TRAPPC4-204ENST00000524797 METTL24Q5JXM2 366 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 KIAA0825Q8IV33 1275 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 OGFOD1Q8N543 542 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 CERS5Q8N5B7 392 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 CDCA5Q96FF9 252 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 HHIPL1Q96JK4 782 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 HDAC9Q9UKV0 1011 aa14□□□□□ -0.17
TRAPPC4-204ENST00000524797 NBPF9Q3BBW0 867 aa13.99□□□□□ -0.17
TRAPPC4-204ENST00000524797 INTS3Q68E01 1043 aaKnown RBP13.99□□□□□ -0.17
TRAPPC4-204ENST00000524797 VGLL2Q8N8G2 317 aa13.99□□□□□ -0.17
TRAPPC4-204ENST00000524797 FAM205AQ6ZU69 1335 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 PAPPA2Q9BXP8 1791 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 BCAR3O75815 825 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 SASH1O94885 1247 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 HIBADHP31937 336 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 GYG1P46976 350 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 TDRD7Q8NHU6 1098 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 ZBED3Q96IU2 234 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 FAM84BQ96KN1 310 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 GBA2Q9HCG7 927 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 EYA2O00167 538 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 WNT10BO00744 389 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms