RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 PRKAB1Q9Y478 270 aa7.6□□□□□ -1.19
SDC2-208ENST00000523877 LRRFIP2Q9Y608 721 aaKnown RBP7.6□□□□□ -1.19
SDC2-208ENST00000523877 BRD4O60885 1362 aaPredicted RBP7.59□□□□□ -1.19
SDC2-208ENST00000523877 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.59□□□□□ -1.19
SDC2-208ENST00000523877 CPLX1O14810 134 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 KIF3BO15066 747 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 ORC4O43929 436 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 PDGFRBP09619 1106 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 ENPP1P22413 925 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 HOXC13P31276 330 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 MAP2K2P36507 400 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 NSUN2Q08J23 767 aaKnown RBP eCLIP7.59□□□□□ -1.19
SDC2-208ENST00000523877 ODR4Q5SWX8 454 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 CCDC30Q5VVM6 783 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 CYB5RLQ6IPT4 315 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 PPP4R4Q6NUP7 873 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 KCNV1Q6PIU1 500 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 SPATS2Q86XZ4 545 aaKnown RBP7.59□□□□□ -1.19
SDC2-208ENST00000523877 TRIM42Q8IWZ5 723 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 NBPF15Q8N660 670 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 APPL2Q8NEU8 664 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 ANKRD20A12PQ8NF67 263 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 MIPOL1Q8TD10 442 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 RTF1Q92541 710 aaKnown RBP7.59□□□□□ -1.19
SDC2-208ENST00000523877 RELTQ969Z4 430 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 DHRS1Q96LJ7 313 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 SPAG5Q96R06 1193 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.59□□□□□ -1.19
SDC2-208ENST00000523877 TRAK1Q9UPV9 953 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 TMEM98Q9Y2Y6 226 aa7.59□□□□□ -1.19
SDC2-208ENST00000523877 RRP15Q9Y3B9 282 aaKnown RBP7.59□□□□□ -1.19
SDC2-208ENST00000523877 RSF1Q96T23 1441 aaPredicted RBP7.59□□□□□ -1.19
SDC2-208ENST00000523877 KANK1Q14678 1352 aa7.59□□□□□ -1.2
SDC2-208ENST00000523877 BAZ1BQ9UIG0 1483 aaKnown RBP7.58□□□□□ -1.2
SDC2-208ENST00000523877 UQCRHLA0A096LP55 91 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 PSDA5PKW4 1024 aaPredicted RBP7.58□□□□□ -1.2
SDC2-208ENST00000523877 A6NJY4 79 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 H0Y3Z8 333 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 TK2O00142 265 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 FIBPO43427 364 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 DIAPH1O60610 1272 aaKnown RBP7.58□□□□□ -1.2
SDC2-208ENST00000523877 SASH1O94885 1247 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 UQCRHP07919 91 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 IDEP14735 1019 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 ZNF24P17028 368 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 RFX1P22670 979 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 SMARCA1P28370 1054 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 OAS2P29728 719 aaKnown RBP7.58□□□□□ -1.2
SDC2-208ENST00000523877 PRPHP41219 470 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 NASPP49321 788 aaPredicted RBP7.58□□□□□ -1.2
SDC2-208ENST00000523877 SNX16P57768 344 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 RBM6P78332 1123 aaKnown RBP7.58□□□□□ -1.2
SDC2-208ENST00000523877 DEUP1Q05D60 604 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 RAD51AP2Q09MP3 1159 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 ZBTB17Q13105 803 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 PDIA5Q14554 519 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 PTPN14Q15678 1187 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 PKN1Q16512 942 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 DBN1Q16643 649 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 SLC5A9Q2M3M2 681 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 SYCP2LQ5T4T6 812 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 RC3H1Q5TC82 1133 aaKnown RBP7.58□□□□□ -1.2
SDC2-208ENST00000523877 HHATQ5VTY9 493 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 MYSM1Q5VVJ2 828 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 SEPT14Q6ZU15 432 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 GPIHBP1Q8IV16 184 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 ANKRD18AQ8IVF6 992 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 KRT222Q8N1A0 295 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 CCDC26Q8TAB7 109 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 TSC1Q92574 1164 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 MAML1Q92585 1016 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 DHTKD1Q96HY7 919 aaPredicted RBP7.58□□□□□ -1.2
SDC2-208ENST00000523877 PLEKHG4BQ96PX9 1271 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 SH3GL1Q99961 368 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 TCHPQ9BT92 498 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 SRRTQ9BXP5 876 aaKnown RBP7.58□□□□□ -1.2
SDC2-208ENST00000523877 PPP4R2Q9NY27 417 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 DMGDHQ9UI17 866 aaKnown RBP7.58□□□□□ -1.2
SDC2-208ENST00000523877 JRKLQ9Y4A0 524 aa7.58□□□□□ -1.2
SDC2-208ENST00000523877 FAM170AA1A519 330 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 SLC26A4O43511 780 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 SGTAO43765 313 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 SMC2O95347 1197 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 KRT18P05783 430 aaKnown RBP7.57□□□□□ -1.2
SDC2-208ENST00000523877 TSPY4P0CV99 314 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 TSPY10P0CW01 314 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 PDE4AP27815 886 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 GNALP38405 381 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 PAPOLAP51003 745 aaKnown RBP7.57□□□□□ -1.2
SDC2-208ENST00000523877 CCDC173Q0VFZ6 552 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 PPP2R5BQ15173 497 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 TOMM20Q15388 145 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.57□□□□□ -1.2
SDC2-208ENST00000523877 NOM1Q5C9Z4 860 aaKnown RBP7.57□□□□□ -1.2
SDC2-208ENST00000523877 SPECC1Q5M775 1068 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 LMBRD2Q68DH5 695 aaPredicted RBP7.57□□□□□ -1.2
SDC2-208ENST00000523877 B4GALNT3Q6L9W6 998 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 ALKBH2Q6NS38 261 aa7.57□□□□□ -1.2
SDC2-208ENST00000523877 ZNF746Q6NUN9 644 aaPredicted RBP7.57□□□□□ -1.2
SDC2-208ENST00000523877 JAZF1Q86VZ6 243 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms