RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SCTRP47872 440 aa9.87□□□□□ -0.83
SDCBP-210ENST00000522843 DDB1Q16531 1140 aa9.87□□□□□ -0.83
SDCBP-210ENST00000522843 GPR162Q16538 588 aa9.87□□□□□ -0.83
SDCBP-210ENST00000522843 PCMTD1Q96MG8 357 aaPredicted RBP9.87□□□□□ -0.83
SDCBP-210ENST00000522843 ARHGEF10LQ9HCE6 1279 aa9.87□□□□□ -0.83
SDCBP-210ENST00000522843 ITSN1Q15811 1721 aa9.87□□□□□ -0.83
SDCBP-210ENST00000522843 AATKQ6ZMQ8 1374 aa9.87□□□□□ -0.83
SDCBP-210ENST00000522843 TOPAZ1Q8N9V7 1692 aa9.87□□□□□ -0.83
SDCBP-210ENST00000522843 ACEP12821 1306 aa9.86□□□□□ -0.83
SDCBP-210ENST00000522843 K7ELQ4 463 aaPredicted RBP9.86□□□□□ -0.83
SDCBP-210ENST00000522843 TRAK2O60296 914 aa9.86□□□□□ -0.83
SDCBP-210ENST00000522843 GCP02774 474 aa9.86□□□□□ -0.83
SDCBP-210ENST00000522843 ZNF827Q17R98 1081 aa9.86□□□□□ -0.83
SDCBP-210ENST00000522843 MPHOSPH9Q99550 1183 aa9.86□□□□□ -0.83
SDCBP-210ENST00000522843 OSBPL3Q9H4L5 887 aa9.86□□□□□ -0.83
SDCBP-210ENST00000522843 MKL2Q9ULH7 1088 aa9.86□□□□□ -0.83
SDCBP-210ENST00000522843 PCDHB11Q9Y5F2 797 aa9.86□□□□□ -0.83
SDCBP-210ENST00000522843 COL18A1P39060 1754 aa9.86□□□□□ -0.83
SDCBP-210ENST00000522843 COL24A1Q17RW2 1714 aa9.85□□□□□ -0.83
SDCBP-210ENST00000522843 KRBA1A5PL33 1030 aa9.85□□□□□ -0.83
SDCBP-210ENST00000522843 ALYREFQ86V81 257 aaKnown RBP9.85□□□□□ -0.83
SDCBP-210ENST00000522843 NLGN2Q8NFZ4 835 aa9.85□□□□□ -0.83
SDCBP-210ENST00000522843 ZNF592Q92610 1267 aa9.85□□□□□ -0.83
SDCBP-210ENST00000522843 KLRG1Q96E93 195 aa9.85□□□□□ -0.83
SDCBP-210ENST00000522843 PHF24Q9UPV7 400 aa9.85□□□□□ -0.83
SDCBP-210ENST00000522843 AKAP12Q02952 1782 aa9.85□□□□□ -0.83
SDCBP-210ENST00000522843 SHISA8B8ZZ34 492 aa9.84□□□□□ -0.83
SDCBP-210ENST00000522843 THBS1P07996 1170 aa9.84□□□□□ -0.83
SDCBP-210ENST00000522843 YBX3P16989 372 aaKnown RBP eCLIP9.84□□□□□ -0.83
SDCBP-210ENST00000522843 ABTB2Q8N961 1025 aa9.84□□□□□ -0.83
SDCBP-210ENST00000522843 ATP10DQ9P241 1426 aa9.83□□□□□ -0.84
SDCBP-210ENST00000522843 ARHGEF28Q8N1W1 1705 aaKnown RBP9.83□□□□□ -0.84
SDCBP-210ENST00000522843 GNRH1P01148 92 aa9.83□□□□□ -0.84
SDCBP-210ENST00000522843 PRKCSHP14314 528 aaPredicted RBP9.83□□□□□ -0.84
SDCBP-210ENST00000522843 HSPA6P17066 643 aa9.83□□□□□ -0.84
SDCBP-210ENST00000522843 ESYT1Q9BSJ8 1104 aa9.83□□□□□ -0.84
SDCBP-210ENST00000522843 GDF2Q9UK05 429 aaPredicted RBP9.83□□□□□ -0.84
SDCBP-210ENST00000522843 CENPCQ03188 943 aa9.82□□□□□ -0.84
SDCBP-210ENST00000522843 NR1H3Q13133 447 aa9.82□□□□□ -0.84
SDCBP-210ENST00000522843 C1orf229Q6ZS94 237 aaPredicted RBP9.82□□□□□ -0.84
SDCBP-210ENST00000522843 EDARADDQ8WWZ3 215 aa9.82□□□□□ -0.84
SDCBP-210ENST00000522843 CNKSR1Q969H4 720 aa9.82□□□□□ -0.84
SDCBP-210ENST00000522843 CDK19Q9BWU1 502 aa9.82□□□□□ -0.84
SDCBP-210ENST00000522843 RRAGCQ9HB90 399 aa9.82□□□□□ -0.84
SDCBP-210ENST00000522843 GPAMQ9HCL2 828 aa9.82□□□□□ -0.84
SDCBP-210ENST00000522843 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
SDCBP-210ENST00000522843 NHSQ6T4R5 1651 aa9.82□□□□□ -0.84
SDCBP-210ENST00000522843 SLIT3O75094 1523 aa9.82□□□□□ -0.84
SDCBP-210ENST00000522843 A0A1B0GTH6 734 aa9.81□□□□□ -0.84
SDCBP-210ENST00000522843 TOM1L2Q6ZVM7 507 aa9.81□□□□□ -0.84
SDCBP-210ENST00000522843 RAB6BQ9NRW1 208 aa9.81□□□□□ -0.84
SDCBP-210ENST00000522843 WDR17Q8IZU2 1322 aa9.81□□□□□ -0.84
SDCBP-210ENST00000522843 ADCY9O60503 1353 aa9.8□□□□□ -0.84
SDCBP-210ENST00000522843 ZBTB7CA1YPR0 619 aa9.8□□□□□ -0.84
SDCBP-210ENST00000522843 COL8A1P27658 744 aa9.8□□□□□ -0.84
SDCBP-210ENST00000522843 PHKA2P46019 1235 aa9.8□□□□□ -0.84
SDCBP-210ENST00000522843 LBRQ14739 615 aaKnown RBP9.8□□□□□ -0.84
SDCBP-210ENST00000522843 NLRP13Q86W25 1043 aa9.8□□□□□ -0.84
SDCBP-210ENST00000522843 TUBGCP6Q96RT7 1819 aa9.79□□□□□ -0.84
SDCBP-210ENST00000522843 RGPD5Q99666 1765 aa9.79□□□□□ -0.84
SDCBP-210ENST00000522843 IL2RAP01589 272 aa9.79□□□□□ -0.84
SDCBP-210ENST00000522843 GOLGA6L1Q8N7Z2 621 aa9.79□□□□□ -0.84
SDCBP-210ENST00000522843 ACSBG1Q96GR2 724 aa9.79□□□□□ -0.84
SDCBP-210ENST00000522843 ZSCAN10Q96SZ4 725 aaPredicted RBP9.79□□□□□ -0.84
SDCBP-210ENST00000522843 PNPLA7Q6ZV29 1317 aa9.79□□□□□ -0.84
SDCBP-210ENST00000522843 QSER1Q2KHR3 1735 aa9.79□□□□□ -0.84
SDCBP-210ENST00000522843 BTAF1O14981 1849 aa9.78□□□□□ -0.84
SDCBP-210ENST00000522843 UBAP2LQ14157 1087 aaKnown RBP9.78□□□□□ -0.84
SDCBP-210ENST00000522843 CDCA7Q9BWT1 371 aaPredicted RBP9.78□□□□□ -0.84
SDCBP-210ENST00000522843 HRH3Q9Y5N1 445 aa9.78□□□□□ -0.84
SDCBP-210ENST00000522843 TNS2Q63HR2 1409 aa9.77□□□□□ -0.85
SDCBP-210ENST00000522843 FURINP09958 794 aa9.77□□□□□ -0.85
SDCBP-210ENST00000522843 CSB-PGBD3P0DP91 1061 aa9.77□□□□□ -0.85
SDCBP-210ENST00000522843 GTF2E1P29083 439 aaPredicted RBP9.77□□□□□ -0.85
SDCBP-210ENST00000522843 PGBD3Q8N328 593 aa9.77□□□□□ -0.85
SDCBP-210ENST00000522843 XAGE2Q96GT9 111 aa9.77□□□□□ -0.85
SDCBP-210ENST00000522843 CARD10Q9BWT7 1032 aa9.77□□□□□ -0.85
SDCBP-210ENST00000522843 TRPM1Q7Z4N2 1603 aa9.77□□□□□ -0.85
SDCBP-210ENST00000522843 CPSF1Q10570 1443 aaKnown RBP9.76□□□□□ -0.85
SDCBP-210ENST00000522843 EXOC5O00471 708 aa9.76□□□□□ -0.85
SDCBP-210ENST00000522843 GRIN3BO60391 1043 aa9.76□□□□□ -0.85
SDCBP-210ENST00000522843 MYCP01106 439 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-210ENST00000522843 GNASQ5JWF2 1037 aa9.76□□□□□ -0.85
SDCBP-210ENST00000522843 LINC00114Q6XXX2 140 aa9.76□□□□□ -0.85
SDCBP-210ENST00000522843 DNAJC5GQ8N7S2 189 aa9.76□□□□□ -0.85
SDCBP-210ENST00000522843 ATXN7L1Q9ULK2 861 aaPredicted RBP9.76□□□□□ -0.85
SDCBP-210ENST00000522843 PIK3C2AO00443 1686 aa9.76□□□□□ -0.85
SDCBP-210ENST00000522843 USP6P35125 1406 aa9.75□□□□□ -0.85
SDCBP-210ENST00000522843 PPIP5K1Q6PFW1 1433 aa9.75□□□□□ -0.85
SDCBP-210ENST00000522843 BMP4P12644 408 aa9.75□□□□□ -0.85
SDCBP-210ENST00000522843 AMPD1P23109 780 aa9.75□□□□□ -0.85
SDCBP-210ENST00000522843 POLD1P28340 1107 aa9.75□□□□□ -0.85
SDCBP-210ENST00000522843 EFHC2Q5JST6 749 aa9.75□□□□□ -0.85
SDCBP-210ENST00000522843 TMEM214Q6NUQ4 689 aaKnown RBP9.75□□□□□ -0.85
SDCBP-210ENST00000522843 ARHGEF25Q86VW2 580 aa9.75□□□□□ -0.85
SDCBP-210ENST00000522843 ZNF526Q8TF50 670 aaPredicted RBP9.75□□□□□ -0.85
SDCBP-210ENST00000522843 RUBCNLQ9H714 662 aa9.75□□□□□ -0.85
SDCBP-210ENST00000522843 ABCC6O95255 1503 aa9.75□□□□□ -0.85
SDCBP-210ENST00000522843 PIK3R2O00459 728 aa9.74□□□□□ -0.85
SDCBP-210ENST00000522843 C2CD2LO14523 706 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms