RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 TUBB4AP04350 444 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 HARSP12081 509 aaKnown RBP9.48□□□□□ -0.89
HMGB4-204ENST00000522796 G3BP1Q13283 466 aaKnown RBP eCLIP9.48□□□□□ -0.89
HMGB4-204ENST00000522796 KCNB1Q14721 858 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 NAA25Q14CX7 972 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 C4orf46Q504U0 113 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 CWF19L1Q69YN2 538 aaKnown RBP9.48□□□□□ -0.89
HMGB4-204ENST00000522796 FAAH2Q6GMR7 532 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 MICALCLQ6ZW33 695 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 OSBPL9Q96SU4 736 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 FUT8Q9BYC5 575 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.48□□□□□ -0.89
HMGB4-204ENST00000522796 PTPRGP23470 1445 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 E9PCH4 1651 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 ENO4A6NNW6 628 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 FOSL1P15407 271 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 HOXD10P28358 340 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 GNAI1P63096 354 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 MAP3K9P80192 1104 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 MPP3Q13368 585 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 CCDC65Q8IXS2 484 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 HDAC7Q8WUI4 952 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 LMBR1Q8WVP7 490 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 NACC2Q96BF6 587 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 CCDC114Q96M63 670 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 ARFGAP3Q9NP61 516 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.48□□□□□ -0.89
HMGB4-204ENST00000522796 HOXC10Q9NYD6 342 aa9.48□□□□□ -0.89
HMGB4-204ENST00000522796 INPP5BP32019 993 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 COL19A1Q14993 1142 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 SLC30A9Q6PML9 568 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 TTLL7Q6ZT98 887 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 CEP112Q8N8E3 955 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 MAGEC3Q8TD91 643 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 L3MBTL2Q969R5 705 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 INO80BQ9C086 356 aaPredicted RBP9.47□□□□□ -0.89
HMGB4-204ENST00000522796 PLB1Q6P1J6 1458 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 HECW1Q76N89 1606 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 EIF4BP23588 611 aaKnown RBP9.47□□□□□ -0.89
HMGB4-204ENST00000522796 GCLCP48506 637 aaPredicted RBP9.47□□□□□ -0.89
HMGB4-204ENST00000522796 FAM114A1Q8IWE2 563 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 RETREG2Q8NC44 543 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 NUP133Q8WUM0 1156 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 GPATCH3Q96I76 525 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 MTRQ99707 1265 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 FUCA2Q9BTY2 467 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 TRMT1Q9NXH9 659 aaKnown RBP9.47□□□□□ -0.89
HMGB4-204ENST00000522796 UBAP1Q9NZ09 502 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 SWAP70Q9UH65 585 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 FAM169AQ9Y6X4 670 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 FMN1Q68DA7 1419 aa9.47□□□□□ -0.89
HMGB4-204ENST00000522796 LRRC10BA6NIK2 292 aa9.46□□□□□ -0.89
HMGB4-204ENST00000522796 MAP2K7O14733 419 aa9.46□□□□□ -0.89
HMGB4-204ENST00000522796 ATP6V1G1O75348 118 aa9.46□□□□□ -0.89
HMGB4-204ENST00000522796 ERLIN1O75477 346 aa9.46□□□□□ -0.89
HMGB4-204ENST00000522796 EZRP15311 586 aaKnown RBP9.46□□□□□ -0.89
HMGB4-204ENST00000522796 MX1P20591 662 aa9.46□□□□□ -0.89
HMGB4-204ENST00000522796 ENPP1P22413 925 aa9.46□□□□□ -0.89
HMGB4-204ENST00000522796 ROR2Q01974 943 aaKnown RBP9.46□□□□□ -0.89
HMGB4-204ENST00000522796 SLFN5Q08AF3 891 aa9.46□□□□□ -0.89
HMGB4-204ENST00000522796 KIF4BQ2VIQ3 1234 aa9.46□□□□□ -0.89
HMGB4-204ENST00000522796 LRRC23Q53EV4 343 aaPredicted RBP9.46□□□□□ -0.89
HMGB4-204ENST00000522796 UBE2Q1Q7Z7E8 422 aa9.46□□□□□ -0.89
HMGB4-204ENST00000522796 SLC7A5P2Q9GIP4 190 aa9.46□□□□□ -0.89
HMGB4-204ENST00000522796 ZNF608Q9ULD9 1512 aaPredicted RBP9.46□□□□□ -0.89
HMGB4-204ENST00000522796 PLXNC1O60486 1568 aa9.46□□□□□ -0.9
HMGB4-204ENST00000522796 EFCAB8A8MWE9 144 aa9.46□□□□□ -0.9
HMGB4-204ENST00000522796 FSBPO95073 299 aa9.46□□□□□ -0.9
HMGB4-204ENST00000522796 ATICP31939 592 aa9.46□□□□□ -0.9
HMGB4-204ENST00000522796 PACS1Q6VY07 963 aa9.46□□□□□ -0.9
HMGB4-204ENST00000522796 PDILTQ8N807 584 aa9.46□□□□□ -0.9
HMGB4-204ENST00000522796 ALS2CR12Q96Q35 445 aa9.46□□□□□ -0.9
HMGB4-204ENST00000522796 TRIM4Q9C037 500 aa9.46□□□□□ -0.9
HMGB4-204ENST00000522796 COG6Q9Y2V7 657 aa9.46□□□□□ -0.9
HMGB4-204ENST00000522796 PCDHB15Q9Y5E8 787 aa9.46□□□□□ -0.9
HMGB4-204ENST00000522796 AQRO60306 1485 aaKnown RBP eCLIP9.45□□□□□ -0.9
HMGB4-204ENST00000522796 FRMD3A2A2Y4 597 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 GOLGA6L19H0YKK7 550 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 TRIM37O94972 964 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 FNTAP49354 379 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 KRT72Q14CN4 511 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 THEMIS2Q5TEJ8 643 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 SLC43A3Q8NBI5 491 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 RBM41Q96IZ5 413 aaKnown RBP9.45□□□□□ -0.9
HMGB4-204ENST00000522796 SENP7Q9BQF6 1050 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 PCDHGC5Q9Y5F6 944 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 GOLGA6L10A6NI86 522 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 SLC4A2P04920 1241 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 IL4RP24394 825 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 APOBRQ0VD83 1088 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 POSTNQ15063 836 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 CCDC92Q53HC0 331 aaPredicted RBP9.45□□□□□ -0.9
HMGB4-204ENST00000522796 INCENPQ9NQS7 918 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 RTEL1Q9NZ71 1219 aa9.45□□□□□ -0.9
HMGB4-204ENST00000522796 EIF3FO00303 357 aaPredicted RBP9.44□□□□□ -0.9
HMGB4-204ENST00000522796 EBAG9O00559 213 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 ZEB2O60315 1214 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 PPFIA3O75145 1194 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 BCAR3O75815 825 aa9.44□□□□□ -0.9
HMGB4-204ENST00000522796 ZNF189O75820 626 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms