RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 MICALL2Q8IY33 904 aa22.38■■□□□ 1.17
CLK4-211ENST00000522556 YTHDC1Q96MU7 727 aaKnown RBP22.38■■□□□ 1.17
CLK4-211ENST00000522556 VIL1P09327 827 aaKnown RBP22.37■■□□□ 1.17
CLK4-211ENST00000522556 HIRAP54198 1017 aaPredicted RBP22.37■■□□□ 1.17
CLK4-211ENST00000522556 PTPN12Q05209 780 aaKnown RBP22.37■■□□□ 1.17
CLK4-211ENST00000522556 VGLL2Q8N8G2 317 aa22.37■■□□□ 1.17
CLK4-211ENST00000522556 PANK1Q8TE04 598 aa22.37■■□□□ 1.17
CLK4-211ENST00000522556 CNOT7Q9UIV1 285 aaKnown RBP22.37■■□□□ 1.17
CLK4-211ENST00000522556 PA2G4Q9UQ80 394 aaKnown RBP22.37■■□□□ 1.17
CLK4-211ENST00000522556 CLEC11AQ9Y240 323 aa22.37■■□□□ 1.17
CLK4-211ENST00000522556 SAMD7Q7Z3H4 446 aa22.36■■□□□ 1.17
CLK4-211ENST00000522556 DZIP1LQ8IYY4 767 aaKnown RBP22.36■■□□□ 1.17
CLK4-211ENST00000522556 SIL1Q9H173 461 aa22.36■■□□□ 1.17
CLK4-211ENST00000522556 FMR1Q06787 632 aaKnown RBP eCLIP22.35■■□□□ 1.17
CLK4-211ENST00000522556 PODNQ7Z5L7 613 aa22.35■■□□□ 1.17
CLK4-211ENST00000522556 COA1Q9GZY4 146 aa22.35■■□□□ 1.17
CLK4-211ENST00000522556 ADARB2Q9NS39 739 aaKnown RBP22.35■■□□□ 1.17
CLK4-211ENST00000522556 ZNF609O15014 1411 aa22.34■■□□□ 1.17
CLK4-211ENST00000522556 GNAI3P08754 354 aa22.34■■□□□ 1.17
CLK4-211ENST00000522556 METTL24Q5JXM2 366 aa22.34■■□□□ 1.17
CLK4-211ENST00000522556 DACT2Q5SW24 774 aa22.34■■□□□ 1.17
CLK4-211ENST00000522556 RSBN1LQ6PCB5 846 aaPredicted RBP22.34■■□□□ 1.17
CLK4-211ENST00000522556 C15orf52Q6ZUT6 534 aaKnown RBP22.34■■□□□ 1.17
CLK4-211ENST00000522556 ATG9AQ7Z3C6 839 aa22.34■■□□□ 1.17
CLK4-211ENST00000522556 PNMA8AQ86V59 439 aaPredicted RBP22.34■■□□□ 1.17
CLK4-211ENST00000522556 FBXW7Q969H0 707 aa22.34■■□□□ 1.17
CLK4-211ENST00000522556 GMLQ99445 158 aa22.34■■□□□ 1.17
CLK4-211ENST00000522556 C1orf115Q9H7X2 142 aa22.34■■□□□ 1.17
CLK4-211ENST00000522556 CD209Q9NNX6 404 aa22.34■■□□□ 1.17
CLK4-211ENST00000522556 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
CLK4-211ENST00000522556 MROH5Q6ZUA9 1318 aa22.33■■□□□ 1.17
CLK4-211ENST00000522556 USP17L3A6NCW0 530 aa22.33■■□□□ 1.17
CLK4-211ENST00000522556 USP17L4A6NCW7 530 aa22.33■■□□□ 1.17
CLK4-211ENST00000522556 EYA2O00167 538 aa22.33■■□□□ 1.17
CLK4-211ENST00000522556 ITGBL1O95965 494 aaPredicted RBP22.33■■□□□ 1.17
CLK4-211ENST00000522556 GYG1P46976 350 aa22.33■■□□□ 1.17
CLK4-211ENST00000522556 TBC1D10BQ4KMP7 808 aaPredicted RBP22.33■■□□□ 1.17
CLK4-211ENST00000522556 USP50Q70EL3 339 aaPredicted RBP22.33■■□□□ 1.17
CLK4-211ENST00000522556 USP17L1Q7RTZ2 530 aa22.33■■□□□ 1.17
CLK4-211ENST00000522556 ITPRIPQ8IWB1 547 aa22.33■■□□□ 1.17
CLK4-211ENST00000522556 FTSJ3Q8IY81 847 aaKnown RBP22.33■■□□□ 1.17
CLK4-211ENST00000522556 DPF2Q92785 391 aa22.33■■□□□ 1.17
CLK4-211ENST00000522556 JAG2Q9Y219 1238 aa22.33■■□□□ 1.17
CLK4-211ENST00000522556 ASTN2O75129 1339 aaPredicted RBP22.31■■□□□ 1.16
CLK4-211ENST00000522556 PASKQ96RG2 1323 aa22.31■■□□□ 1.16
CLK4-211ENST00000522556 CEP350Q5VT06 3117 aa22.31■■□□□ 1.16
CLK4-211ENST00000522556 PNMA6EA0A0J9YXQ4 647 aa22.31■■□□□ 1.16
CLK4-211ENST00000522556 RPS12P25398 132 aaKnown RBP22.31■■□□□ 1.16
CLK4-211ENST00000522556 GTF2IP78347 998 aa22.31■■□□□ 1.16
CLK4-211ENST00000522556 UBE4AQ14139 1066 aa22.31■■□□□ 1.16
CLK4-211ENST00000522556 RBM26Q5T8P6 1007 aaKnown RBP22.31■■□□□ 1.16
CLK4-211ENST00000522556 APLP1P51693 650 aa22.3■■□□□ 1.16
CLK4-211ENST00000522556 MTX1Q13505 466 aa22.3■■□□□ 1.16
CLK4-211ENST00000522556 CNTROBQ8N137 903 aa22.3■■□□□ 1.16
CLK4-211ENST00000522556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.3■■□□□ 1.16
CLK4-211ENST00000522556 ARAP2Q8WZ64 1704 aa22.29■■□□□ 1.16
CLK4-211ENST00000522556 POLR2AP24928 1970 aaKnown RBP22.29■■□□□ 1.16
CLK4-211ENST00000522556 TRAF5O00463 557 aa22.29■■□□□ 1.16
CLK4-211ENST00000522556 SRGAP3O43295 1099 aa22.29■■□□□ 1.16
CLK4-211ENST00000522556 PDE8BO95263 885 aa22.29■■□□□ 1.16
CLK4-211ENST00000522556 GNAI2P04899 355 aa22.29■■□□□ 1.16
CLK4-211ENST00000522556 DLK2Q6UY11 383 aa22.29■■□□□ 1.16
CLK4-211ENST00000522556 CERS5Q8N5B7 392 aa22.29■■□□□ 1.16
CLK4-211ENST00000522556 FAM84BQ96KN1 310 aaPredicted RBP22.29■■□□□ 1.16
CLK4-211ENST00000522556 H7C1D1 291 aa22.28■■□□□ 1.16
CLK4-211ENST00000522556 ZBTB7BO15156 539 aaPredicted RBP22.28■■□□□ 1.16
CLK4-211ENST00000522556 IL1R1P14778 569 aa22.28■■□□□ 1.16
CLK4-211ENST00000522556 FGFR2P21802 821 aa22.28■■□□□ 1.16
CLK4-211ENST00000522556 C20orf194Q5TEA3 1177 aa22.28■■□□□ 1.16
CLK4-211ENST00000522556 STRIP1Q5VSL9 837 aa22.28■■□□□ 1.16
CLK4-211ENST00000522556 TTLL5Q6EMB2 1281 aa22.28■■□□□ 1.16
CLK4-211ENST00000522556 ZNF804AQ7Z570 1209 aa22.28■■□□□ 1.16
CLK4-211ENST00000522556 AGBL3Q8NEM8 1001 aa22.28■■□□□ 1.16
CLK4-211ENST00000522556 IQSEC3Q9UPP2 1182 aaPredicted RBP22.28■■□□□ 1.16
CLK4-211ENST00000522556 ZNF280AP59817 542 aaPredicted RBP22.27■■□□□ 1.16
CLK4-211ENST00000522556 KIF4BQ2VIQ3 1234 aa22.27■■□□□ 1.16
CLK4-211ENST00000522556 GLIS2Q9BZE0 524 aaPredicted RBP22.27■■□□□ 1.16
CLK4-211ENST00000522556 COPRSQ9NQ92 184 aa22.27■■□□□ 1.16
CLK4-211ENST00000522556 MYH13Q9UKX3 1938 aa22.26■■□□□ 1.15
CLK4-211ENST00000522556 CIAO1O76071 339 aa22.26■■□□□ 1.15
CLK4-211ENST00000522556 TRPM7Q96QT4 1865 aa22.26■■□□□ 1.15
CLK4-211ENST00000522556 USP17L8P0C7I0 530 aa22.25■■□□□ 1.15
CLK4-211ENST00000522556 HIBADHP31937 336 aaKnown RBP22.25■■□□□ 1.15
CLK4-211ENST00000522556 KIAA0825Q8IV33 1275 aa22.25■■□□□ 1.15
CLK4-211ENST00000522556 TDRD7Q8NHU6 1098 aaKnown RBP22.25■■□□□ 1.15
CLK4-211ENST00000522556 PGAP2Q9UHJ9 254 aa22.25■■□□□ 1.15
CLK4-211ENST00000522556 HDAC5Q9UQL6 1122 aa22.25■■□□□ 1.15
CLK4-211ENST00000522556 COG6Q9Y2V7 657 aa22.25■■□□□ 1.15
CLK4-211ENST00000522556 COL1A1P02452 1464 aaPredicted RBP22.25■■□□□ 1.15
CLK4-211ENST00000522556 BCAMP50895 628 aa22.24■■□□□ 1.15
CLK4-211ENST00000522556 PUM3Q15397 648 aaKnown RBP22.24■■□□□ 1.15
CLK4-211ENST00000522556 FBXO33Q7Z6M2 555 aa22.24■■□□□ 1.15
CLK4-211ENST00000522556 DNAJC5GQ8N7S2 189 aa22.24■■□□□ 1.15
CLK4-211ENST00000522556 PCDHAC2Q9Y5I4 1007 aa22.24■■□□□ 1.15
CLK4-211ENST00000522556 MYOZ2Q9NPC6 264 aa22.23■■□□□ 1.15
CLK4-211ENST00000522556 GGA3Q9NZ52 723 aa22.23■■□□□ 1.15
CLK4-211ENST00000522556 SCAF8Q9UPN6 1271 aaKnown RBP22.23■■□□□ 1.15
CLK4-211ENST00000522556 F8W031 263 aaPredicted RBP22.22■■□□□ 1.15
CLK4-211ENST00000522556 ADORA1P30542 326 aa22.22■■□□□ 1.15
CLK4-211ENST00000522556 GRIK5Q16478 980 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms