RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 PI4KAP1Q8N8J0 262 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 ARHGAP45Q92619 1136 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 BCL2L13Q9BXK5 485 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 ZBTB3Q9H5J0 574 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 PRDM9Q9NQV7 894 aa10.63□□□□□ -0.71
VPS13B-210ENST00000521932 KDM4AO75164 1064 aa10.62□□□□□ -0.71
VPS13B-210ENST00000521932 ZBTB7AO95365 584 aa10.62□□□□□ -0.71
VPS13B-210ENST00000521932 TRIM28Q13263 835 aaKnown RBP10.62□□□□□ -0.71
VPS13B-210ENST00000521932 FKBP5Q13451 457 aaPredicted RBP10.62□□□□□ -0.71
VPS13B-210ENST00000521932 NFIXQ14938 502 aa10.62□□□□□ -0.71
VPS13B-210ENST00000521932 HSP90AB3PQ58FF7 597 aa10.62□□□□□ -0.71
VPS13B-210ENST00000521932 TBC1D9BQ66K14 1250 aa10.62□□□□□ -0.71
VPS13B-210ENST00000521932 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
VPS13B-210ENST00000521932 RCAN3Q9UKA8 241 aa10.62□□□□□ -0.71
VPS13B-210ENST00000521932 NOB1Q9ULX3 412 aaKnown RBP10.62□□□□□ -0.71
VPS13B-210ENST00000521932 MAP3K2Q9Y2U5 619 aa10.62□□□□□ -0.71
VPS13B-210ENST00000521932 ADCY9O60503 1353 aa10.62□□□□□ -0.71
VPS13B-210ENST00000521932 COL24A1Q17RW2 1714 aa10.61□□□□□ -0.71
VPS13B-210ENST00000521932 KIF16BQ96L93 1317 aa10.61□□□□□ -0.71
VPS13B-210ENST00000521932 ATP10DQ9P241 1426 aa10.61□□□□□ -0.71
VPS13B-210ENST00000521932 AMHR2Q16671 573 aa10.61□□□□□ -0.71
VPS13B-210ENST00000521932 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
VPS13B-210ENST00000521932 SETDB2Q96T68 719 aa10.61□□□□□ -0.71
VPS13B-210ENST00000521932 ISCA1Q9BUE6 129 aa10.61□□□□□ -0.71
VPS13B-210ENST00000521932 SPON1Q9HCB6 807 aa10.61□□□□□ -0.71
VPS13B-210ENST00000521932 BCORQ6W2J9 1755 aa10.61□□□□□ -0.71
VPS13B-210ENST00000521932 SCN7AQ01118 1682 aa10.6□□□□□ -0.71
VPS13B-210ENST00000521932 POLRMTO00411 1230 aaKnown RBP10.6□□□□□ -0.71
VPS13B-210ENST00000521932 LCE2BO14633 110 aa10.6□□□□□ -0.71
VPS13B-210ENST00000521932 IPO8O15397 1037 aaKnown RBP10.6□□□□□ -0.71
VPS13B-210ENST00000521932 MMP10P09238 476 aa10.6□□□□□ -0.71
VPS13B-210ENST00000521932 MSL1Q68DK7 614 aa10.6□□□□□ -0.71
VPS13B-210ENST00000521932 DNAAF4Q8WXU2 420 aa10.6□□□□□ -0.71
VPS13B-210ENST00000521932 NIP7Q9Y221 180 aaKnown RBP eCLIP10.6□□□□□ -0.71
VPS13B-210ENST00000521932 SRCAPQ6ZRS2 3230 aa10.6□□□□□ -0.71
VPS13B-210ENST00000521932 NUP98P52948 1817 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 HOXA2O43364 376 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 FMNL1O95466 1100 aaPredicted RBP10.59□□□□□ -0.71
VPS13B-210ENST00000521932 POLD1P28340 1107 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 SLC19A1P41440 591 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 GUCA2AQ02747 115 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 DDR1Q08345 913 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 PARP10Q53GL7 1025 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 BEND3Q5T5X7 828 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 ATF7IPQ6VMQ6 1270 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 Q6ZNB5 142 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 TRIM67Q6ZTA4 783 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 LINS1Q8NG48 757 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 MYD88Q99836 296 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 API5Q9BZZ5 524 aaKnown RBP10.59□□□□□ -0.71
VPS13B-210ENST00000521932 PARP3Q9Y6F1 533 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 CARMIL3Q8ND23 1372 aa10.59□□□□□ -0.71
VPS13B-210ENST00000521932 UBN2Q6ZU65 1347 aa10.58□□□□□ -0.71
VPS13B-210ENST00000521932 IBTKQ9P2D0 1353 aaPredicted RBP10.58□□□□□ -0.72
VPS13B-210ENST00000521932 F6X3S4 739 aa10.58□□□□□ -0.72
VPS13B-210ENST00000521932 SERPINB2P05120 415 aa10.58□□□□□ -0.72
VPS13B-210ENST00000521932 IGKV5-2P06315 115 aa10.58□□□□□ -0.72
VPS13B-210ENST00000521932 TRIM27P14373 513 aa10.58□□□□□ -0.72
VPS13B-210ENST00000521932 NEXNQ0ZGT2 675 aa10.58□□□□□ -0.72
VPS13B-210ENST00000521932 SUSD4Q5VX71 490 aa10.58□□□□□ -0.72
VPS13B-210ENST00000521932 ZKSCAN2Q63HK3 967 aa10.58□□□□□ -0.72
VPS13B-210ENST00000521932 TPTE2Q6XPS3 522 aa10.58□□□□□ -0.72
VPS13B-210ENST00000521932 NLRP10Q86W26 655 aa10.58□□□□□ -0.72
VPS13B-210ENST00000521932 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
VPS13B-210ENST00000521932 FRAT1Q92837 279 aaPredicted RBP10.58□□□□□ -0.72
VPS13B-210ENST00000521932 NEURL1BA8MQ27 555 aa10.57□□□□□ -0.72
VPS13B-210ENST00000521932 ATP5J2-PTCD1G3V325 749 aa10.57□□□□□ -0.72
VPS13B-210ENST00000521932 GFRA3O60609 400 aa10.57□□□□□ -0.72
VPS13B-210ENST00000521932 GPTP24298 496 aa10.57□□□□□ -0.72
VPS13B-210ENST00000521932 SSTR3P32745 418 aaPredicted RBP10.57□□□□□ -0.72
VPS13B-210ENST00000521932 PPP1R42Q7Z4L9 355 aa10.57□□□□□ -0.72
VPS13B-210ENST00000521932 NYXQ9GZU5 481 aa10.57□□□□□ -0.72
VPS13B-210ENST00000521932 ARFGEF2Q9Y6D5 1785 aa10.57□□□□□ -0.72
VPS13B-210ENST00000521932 RNF123Q5XPI4 1314 aa10.57□□□□□ -0.72
VPS13B-210ENST00000521932 TRIM66O15016 1216 aa10.56□□□□□ -0.72
VPS13B-210ENST00000521932 ALDH1L1O75891 902 aa10.56□□□□□ -0.72
VPS13B-210ENST00000521932 NTSR2O95665 410 aa10.56□□□□□ -0.72
VPS13B-210ENST00000521932 CWF19L2Q2TBE0 894 aaKnown RBP10.56□□□□□ -0.72
VPS13B-210ENST00000521932 SPRYD7Q5W111 196 aa10.56□□□□□ -0.72
VPS13B-210ENST00000521932 INTS3Q68E01 1043 aaKnown RBP10.56□□□□□ -0.72
VPS13B-210ENST00000521932 ZBTB38Q8NAP3 1195 aaPredicted RBP10.56□□□□□ -0.72
VPS13B-210ENST00000521932 UTP14AQ9BVJ6 771 aaKnown RBP10.56□□□□□ -0.72
VPS13B-210ENST00000521932 SRCIN1Q9C0H9 1055 aa10.56□□□□□ -0.72
VPS13B-210ENST00000521932 CWC25Q9NXE8 425 aaPredicted RBP10.56□□□□□ -0.72
VPS13B-210ENST00000521932 ABCC4O15439 1325 aa10.56□□□□□ -0.72
VPS13B-210ENST00000521932 NRXN2Q9P2S2 1712 aa10.55□□□□□ -0.72
VPS13B-210ENST00000521932 H7C1W4 665 aa10.55□□□□□ -0.72
VPS13B-210ENST00000521932 PCCAP05165 728 aaPredicted RBP10.55□□□□□ -0.72
VPS13B-210ENST00000521932 CCT4P50991 539 aaKnown RBP10.55□□□□□ -0.72
VPS13B-210ENST00000521932 TTLL12Q14166 644 aaPredicted RBP10.55□□□□□ -0.72
VPS13B-210ENST00000521932 GCKRQ14397 625 aa10.55□□□□□ -0.72
VPS13B-210ENST00000521932 LAPTM4AQ15012 233 aa10.55□□□□□ -0.72
VPS13B-210ENST00000521932 GRIPAP1Q4V328 841 aa10.55□□□□□ -0.72
VPS13B-210ENST00000521932 SLC10A5Q5PT55 438 aa10.55□□□□□ -0.72
VPS13B-210ENST00000521932 PRR5LQ6MZQ0 368 aa10.55□□□□□ -0.72
VPS13B-210ENST00000521932 SLC4A10Q6U841 1118 aa10.55□□□□□ -0.72
VPS13B-210ENST00000521932 NBPF5PQ86XG9 351 aaPredicted RBP10.55□□□□□ -0.72
VPS13B-210ENST00000521932 PARP9Q8IXQ6 854 aa10.55□□□□□ -0.72
VPS13B-210ENST00000521932 CNBD1Q8NA66 436 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms