RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 IPO8O15397 1037 aaKnown RBP13.72□□□□□ -0.21
MRPS28-208ENST00000521605 PLIN1O60240 522 aa13.72□□□□□ -0.21
MRPS28-208ENST00000521605 EN2P19622 333 aaPredicted RBP13.72□□□□□ -0.21
MRPS28-208ENST00000521605 NOM1Q5C9Z4 860 aaKnown RBP13.72□□□□□ -0.21
MRPS28-208ENST00000521605 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
MRPS28-208ENST00000521605 B4GALNT3Q6L9W6 998 aa13.72□□□□□ -0.21
MRPS28-208ENST00000521605 TMC4Q7Z404 712 aa13.72□□□□□ -0.21
MRPS28-208ENST00000521605 NLRP10Q86W26 655 aa13.72□□□□□ -0.21
MRPS28-208ENST00000521605 EYA3Q99504 573 aa13.72□□□□□ -0.21
MRPS28-208ENST00000521605 BRCA2P51587 3418 aa13.72□□□□□ -0.21
MRPS28-208ENST00000521605 SZT2Q5T011 3432 aa13.71□□□□□ -0.21
MRPS28-208ENST00000521605 SH3TC1Q8TE82 1336 aa13.71□□□□□ -0.21
MRPS28-208ENST00000521605 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.21
MRPS28-208ENST00000521605 EIF2S2P20042 333 aaKnown RBP13.71□□□□□ -0.21
MRPS28-208ENST00000521605 SREBF2Q12772 1141 aa13.71□□□□□ -0.21
MRPS28-208ENST00000521605 AIMP1Q12904 312 aaKnown RBP13.71□□□□□ -0.21
MRPS28-208ENST00000521605 PRKG1Q13976 671 aa13.71□□□□□ -0.21
MRPS28-208ENST00000521605 PROSER3Q2NL68 480 aa13.71□□□□□ -0.21
MRPS28-208ENST00000521605 INTS3Q68E01 1043 aaKnown RBP13.71□□□□□ -0.21
MRPS28-208ENST00000521605 TSR2Q969E8 191 aaKnown RBP13.71□□□□□ -0.21
MRPS28-208ENST00000521605 SCN9AQ15858 1988 aa13.71□□□□□ -0.22
MRPS28-208ENST00000521605 COL4A1P02462 1669 aa13.7□□□□□ -0.22
MRPS28-208ENST00000521605 C20orf194Q5TEA3 1177 aa13.7□□□□□ -0.22
MRPS28-208ENST00000521605 ZKSCAN2Q63HK3 967 aa13.7□□□□□ -0.22
MRPS28-208ENST00000521605 OTOP1Q7RTM1 612 aa13.7□□□□□ -0.22
MRPS28-208ENST00000521605 TBC1D16Q8TBP0 767 aa13.7□□□□□ -0.22
MRPS28-208ENST00000521605 MYOZ2Q9NPC6 264 aa13.7□□□□□ -0.22
MRPS28-208ENST00000521605 ERBB4Q15303 1308 aa13.69□□□□□ -0.22
MRPS28-208ENST00000521605 VAMP4O75379 141 aa13.69□□□□□ -0.22
MRPS28-208ENST00000521605 ZNF280AP59817 542 aaPredicted RBP13.69□□□□□ -0.22
MRPS28-208ENST00000521605 SSH1Q8WYL5 1049 aa13.69□□□□□ -0.22
MRPS28-208ENST00000521605 ZC3H12CQ9C0D7 883 aaKnown RBP13.69□□□□□ -0.22
MRPS28-208ENST00000521605 MBIPQ9NS73 344 aa13.69□□□□□ -0.22
MRPS28-208ENST00000521605 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
MRPS28-208ENST00000521605 TCIRG1Q13488 830 aa13.68□□□□□ -0.22
MRPS28-208ENST00000521605 PDIA6Q15084 440 aa13.68□□□□□ -0.22
MRPS28-208ENST00000521605 HSP90AB3PQ58FF7 597 aa13.68□□□□□ -0.22
MRPS28-208ENST00000521605 RSBN1LQ6PCB5 846 aaPredicted RBP13.68□□□□□ -0.22
MRPS28-208ENST00000521605 CENPQQ7L2Z9 268 aaPredicted RBP13.68□□□□□ -0.22
MRPS28-208ENST00000521605 LRP10Q7Z4F1 713 aa13.68□□□□□ -0.22
MRPS28-208ENST00000521605 NECTIN2Q92692 538 aa13.68□□□□□ -0.22
MRPS28-208ENST00000521605 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
MRPS28-208ENST00000521605 CHMP4BQ9H444 224 aaKnown RBP13.68□□□□□ -0.22
MRPS28-208ENST00000521605 SMC4Q9NTJ3 1288 aa13.68□□□□□ -0.22
MRPS28-208ENST00000521605 PITPNM2Q9BZ72 1349 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 UFL1O94874 794 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 USP17L8P0C7I0 530 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 NF2P35240 595 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 PTPN12Q05209 780 aaKnown RBP13.67□□□□□ -0.22
MRPS28-208ENST00000521605 NBPF9Q3BBW0 867 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 RTL5Q5HYW3 569 aaPredicted RBP13.67□□□□□ -0.22
MRPS28-208ENST00000521605 ATF7IPQ6VMQ6 1270 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 COPS6Q7L5N1 327 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 SLC17A8Q8NDX2 589 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 AGBL3Q8NEM8 1001 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 CFHR5Q9BXR6 569 aa13.67□□□□□ -0.22
MRPS28-208ENST00000521605 CD99L2Q8TCZ2 262 aa13.66□□□□□ -0.22
MRPS28-208ENST00000521605 ANKIB1Q9P2G1 1089 aa13.66□□□□□ -0.22
MRPS28-208ENST00000521605 PTPN22Q9Y2R2 807 aa13.66□□□□□ -0.22
MRPS28-208ENST00000521605 H0YGN5 161 aa13.65□□□□□ -0.22
MRPS28-208ENST00000521605 ALDH1A1P00352 501 aa13.65□□□□□ -0.22
MRPS28-208ENST00000521605 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
MRPS28-208ENST00000521605 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
MRPS28-208ENST00000521605 CLUAP1Q96AJ1 413 aa13.65□□□□□ -0.22
MRPS28-208ENST00000521605 FAM89AQ96GI7 184 aa13.65□□□□□ -0.22
MRPS28-208ENST00000521605 TMEM106CQ9BVX2 250 aa13.65□□□□□ -0.22
MRPS28-208ENST00000521605 FZD1Q9UP38 647 aa13.65□□□□□ -0.22
MRPS28-208ENST00000521605 MYCP01106 439 aaPredicted RBP13.64□□□□□ -0.23
MRPS28-208ENST00000521605 MVPQ14764 893 aaKnown RBP13.64□□□□□ -0.23
MRPS28-208ENST00000521605 SPRYD7Q5W111 196 aa13.64□□□□□ -0.23
MRPS28-208ENST00000521605 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
MRPS28-208ENST00000521605 ARMC9Q7Z3E5 817 aa13.64□□□□□ -0.23
MRPS28-208ENST00000521605 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
MRPS28-208ENST00000521605 TSPYL4Q9UJ04 414 aa13.64□□□□□ -0.23
MRPS28-208ENST00000521605 DDX19BQ9UMR2 479 aa13.64□□□□□ -0.23
MRPS28-208ENST00000521605 SASH1O94885 1247 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 HOXB7P09629 217 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 TRIM27P14373 513 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 RPS8P62241 208 aaKnown RBP13.63□□□□□ -0.23
MRPS28-208ENST00000521605 SF3B3Q15393 1217 aaKnown RBP13.63□□□□□ -0.23
MRPS28-208ENST00000521605 IFNL1Q8IU54 200 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 FBXW7Q969H0 707 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 ARMC5Q96C12 935 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 ERO1AQ96HE7 468 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 GMLQ99445 158 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 MXD3Q9BW11 206 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 EFCC1Q9HA90 598 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 TSHZ2Q9NRE2 1034 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 GGA1Q9UJY5 639 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 ANGEL1Q9UNK9 670 aaKnown RBP13.63□□□□□ -0.23
MRPS28-208ENST00000521605 ZNF609O15014 1411 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 TRIOBPQ9H2D6 2365 aa13.63□□□□□ -0.23
MRPS28-208ENST00000521605 KIAA0100Q14667 2235 aaKnown RBP13.62□□□□□ -0.23
MRPS28-208ENST00000521605 MANSC4A6NHS7 340 aaPredicted RBP13.62□□□□□ -0.23
MRPS28-208ENST00000521605 ATP5J2-PTCD1G3V325 749 aa13.62□□□□□ -0.23
MRPS28-208ENST00000521605 IGF2BP3O00425 579 aaKnown RBP eCLIP13.62□□□□□ -0.23
MRPS28-208ENST00000521605 FTSJ3Q8IY81 847 aaKnown RBP13.62□□□□□ -0.23
MRPS28-208ENST00000521605 FRAT1Q92837 279 aaPredicted RBP13.62□□□□□ -0.23
MRPS28-208ENST00000521605 OTUD5Q96G74 571 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms