RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SRCIN1Q9C0H9 1055 aa5.51□□□□□ -1.53
HMGN1P28-201ENST00000521340 COPRSQ9NQ92 184 aa5.51□□□□□ -1.53
HMGN1P28-201ENST00000521340 FAM8A1Q9UBU6 413 aa5.51□□□□□ -1.53
HMGN1P28-201ENST00000521340 PCDHGC4Q9Y5F7 938 aa5.51□□□□□ -1.53
HMGN1P28-201ENST00000521340 ADAM23O75077 832 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 MAP3K6O95382 1288 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 MAPTP10636 758 aaKnown RBP5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 GJA8P48165 433 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 LAMC2Q13753 1193 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 CCINQ13939 588 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 SLCO4C1Q6ZQN7 724 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 CEP120Q8N960 986 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 BTBD6Q96KE9 485 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 RRAGCQ9HB90 399 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 ABCB6Q9NP58 842 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 KLF15Q9UIH9 416 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 MKL2Q9ULH7 1088 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 PCDHGB7Q9Y5F8 929 aa5.5□□□□□ -1.53
HMGN1P28-201ENST00000521340 ZBTB42B2RXF5 422 aa5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 ATXN7O15265 892 aaPredicted RBP5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 EPXP11678 715 aa5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 EPB42P16452 691 aa5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 ITGAEP38570 1179 aa5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 TTC16Q8NEE8 873 aa5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 PMEPA1Q969W9 287 aa5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 SLC30A3Q99726 388 aa5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 BCL11AQ9H165 835 aa5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 NEUROD4Q9HD90 331 aa5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 NLRP2Q9NX02 1062 aa5.49□□□□□ -1.53
HMGN1P28-201ENST00000521340 NEURL1BA8MQ27 555 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 ARAFP10398 606 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 ACPPP15309 386 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 CES1P23141 567 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 SOX18P35713 384 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 RBL2Q08999 1139 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 FIGNL1Q6PIW4 674 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 CCNJLQ8IV13 435 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 UBXN4Q92575 508 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 RSRP1Q9BUV0 290 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 NOC4LQ9BVI4 516 aaKnown RBP5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 KCNQ5Q9NR82 932 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 TLR7Q9NYK1 1049 aaKnown RBP5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 KANSL3Q9P2N6 904 aa5.48□□□□□ -1.53
HMGN1P28-201ENST00000521340 GARTP22102 1010 aa5.47□□□□□ -1.53
HMGN1P28-201ENST00000521340 FAM182BQ5T319 152 aa5.47□□□□□ -1.53
HMGN1P28-201ENST00000521340 ADAMTSL4Q6UY14 1074 aa5.47□□□□□ -1.53
HMGN1P28-201ENST00000521340 USP48Q86UV5 1035 aa5.47□□□□□ -1.53
HMGN1P28-201ENST00000521340 ZNF654Q8IZM8 581 aa5.47□□□□□ -1.53
HMGN1P28-201ENST00000521340 MDFIQ99750 246 aa5.47□□□□□ -1.53
HMGN1P28-201ENST00000521340 CAPN10Q9HC96 672 aa5.47□□□□□ -1.53
HMGN1P28-201ENST00000521340 DZANK1Q9NVP4 752 aa5.47□□□□□ -1.53
HMGN1P28-201ENST00000521340 ADAMTS1Q9UHI8 967 aa5.47□□□□□ -1.53
HMGN1P28-201ENST00000521340 CADPSQ9ULU8 1353 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 TMEM238LA0A1B0GVL6 79 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 DCDC2BA2VCK2 349 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 FGRP09769 529 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 CD33P20138 364 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 AMPD1P23109 780 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 BAG6P46379 1132 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 GRIA4P48058 902 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 DGKGP49619 791 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 SF3A1Q15459 793 aaKnown RBP5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 TTC39BQ5VTQ0 682 aaPredicted RBP5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 FCHSD1Q86WN1 690 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 RASGRP4Q8TDF6 673 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 ZKSCAN3Q9BRR0 538 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 TRIM56Q9BRZ2 755 aaKnown RBP5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 EFCC1Q9HA90 598 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 PRKAG2Q9UGJ0 569 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 GGT7Q9UJ14 662 aa5.46□□□□□ -1.54
HMGN1P28-201ENST00000521340 KHNYNO15037 678 aaKnown RBP5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 TRPA1O75762 1119 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 EDN3P14138 238 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 ITPKAP23677 461 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 GSTT1P30711 240 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 SPEM2Q0P670 501 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 HS2ST1Q7LGA3 356 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 KRT25Q7Z3Z0 450 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 ALYREFQ86V81 257 aaKnown RBP5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 MCF2L2Q86YR7 1114 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 TRPM4Q8TD43 1214 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 NXPE3Q969Y0 559 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 ARMC5Q96C12 935 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 HHIPQ96QV1 700 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 BHLHE41Q9C0J9 482 aaPredicted RBP5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 CCSER2Q9H7U1 834 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 KBTBD4Q9NVX7 518 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 MARK1Q9P0L2 795 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 GJA3Q9Y6H8 435 aa5.45□□□□□ -1.54
HMGN1P28-201ENST00000521340 C1QTNF9BB2RNN3 333 aa5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 GNB5O14775 395 aa5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 GREM1O60565 184 aa5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 GADD45BO75293 160 aaPredicted RBP5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 NFKB1P19838 968 aa5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 PAK2Q13177 524 aa5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 SPRED3Q2MJR0 410 aa5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 CHSY3Q70JA7 882 aa5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 DHX38Q92620 1227 aaKnown RBP5.44□□□□□ -1.54
HMGN1P28-201ENST00000521340 RHOVQ96L33 236 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms