RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 DPEP1P16444 411 aa18.36■□□□□ 0.53
SREK1-209ENST00000520953 CCDC102BQ68D86 513 aa18.36■□□□□ 0.53
SREK1-209ENST00000520953 DNAJC2Q99543 621 aaKnown RBP18.36■□□□□ 0.53
SREK1-209ENST00000520953 NSFL1CQ9UNZ2 370 aaKnown RBP18.36■□□□□ 0.53
SREK1-209ENST00000520953 CHGBP05060 677 aa18.35■□□□□ 0.53
SREK1-209ENST00000520953 KCNA3P22001 575 aa18.35■□□□□ 0.53
SREK1-209ENST00000520953 PRPF40BQ6NWY9 871 aaKnown RBP18.35■□□□□ 0.53
SREK1-209ENST00000520953 TBC1D9Q6ZT07 1266 aa18.35■□□□□ 0.53
SREK1-209ENST00000520953 KLHL34Q8N239 644 aa18.35■□□□□ 0.53
SREK1-209ENST00000520953 LRRC37AA6NMS7 1700 aa18.35■□□□□ 0.53
SREK1-209ENST00000520953 KIF13BQ9NQT8 1826 aa18.35■□□□□ 0.53
SREK1-209ENST00000520953 KIAA1551Q9HCM1 1747 aa18.35■□□□□ 0.53
SREK1-209ENST00000520953 TTC39AQ5SRH9 613 aa18.35■□□□□ 0.53
SREK1-209ENST00000520953 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
SREK1-209ENST00000520953 ZNF804BA4D1E1 1349 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 STYK1Q6J9G0 422 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 ANKRD2Q9GZV1 360 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 ATP6V0A2Q9Y487 856 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 IRS2Q9Y4H2 1338 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 IFIT1P09914 478 aaKnown RBP18.34■□□□□ 0.53
SREK1-209ENST00000520953 ALDH1B1P30837 517 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 MCAMP43121 646 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 KCNJ4P48050 445 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 UBE4AQ14139 1066 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 LTBP1Q14766 1721 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 ANTXR1Q9H6X2 564 aa18.34■□□□□ 0.53
SREK1-209ENST00000520953 AK9Q5TCS8 1911 aa18.33■□□□□ 0.53
SREK1-209ENST00000520953 CCDC158Q5M9N0 1113 aa18.33■□□□□ 0.52
SREK1-209ENST00000520953 HAUS7Q99871 368 aa18.33■□□□□ 0.52
SREK1-209ENST00000520953 POLLQ9UGP5 575 aa18.33■□□□□ 0.52
SREK1-209ENST00000520953 AKAP11Q9UKA4 1901 aa18.33■□□□□ 0.52
SREK1-209ENST00000520953 XDHP47989 1333 aa18.33■□□□□ 0.52
SREK1-209ENST00000520953 DLEC1Q9Y238 1755 aa18.33■□□□□ 0.52
SREK1-209ENST00000520953 SP8Q8IXZ3 490 aa18.32■□□□□ 0.52
SREK1-209ENST00000520953 FAM84BQ96KN1 310 aaPredicted RBP18.32■□□□□ 0.52
SREK1-209ENST00000520953 GOLIM4O00461 696 aa18.32■□□□□ 0.52
SREK1-209ENST00000520953 UFL1O94874 794 aa18.32■□□□□ 0.52
SREK1-209ENST00000520953 IL25Q9H293 177 aa18.32■□□□□ 0.52
SREK1-209ENST00000520953 DUOX1Q9NRD9 1551 aa18.32■□□□□ 0.52
SREK1-209ENST00000520953 CDC45O75419 566 aa18.31■□□□□ 0.52
SREK1-209ENST00000520953 ZAP70P43403 619 aa18.31■□□□□ 0.52
SREK1-209ENST00000520953 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.52
SREK1-209ENST00000520953 SLFNL1Q499Z3 407 aa18.31■□□□□ 0.52
SREK1-209ENST00000520953 COL1A1P02452 1464 aaPredicted RBP18.31■□□□□ 0.52
SREK1-209ENST00000520953 RASGRF1Q13972 1273 aa18.31■□□□□ 0.52
SREK1-209ENST00000520953 TBC1D16Q8TBP0 767 aa18.31■□□□□ 0.52
SREK1-209ENST00000520953 CNTROBQ8N137 903 aa18.3■□□□□ 0.52
SREK1-209ENST00000520953 C7orf43Q8WVR3 580 aa18.3■□□□□ 0.52
SREK1-209ENST00000520953 ARID4AP29374 1257 aaPredicted RBP18.3■□□□□ 0.52
SREK1-209ENST00000520953 PAG1Q9NWQ8 432 aa18.3■□□□□ 0.52
SREK1-209ENST00000520953 HMG20BQ9P0W2 317 aa18.3■□□□□ 0.52
SREK1-209ENST00000520953 CHMLP26374 656 aa18.29■□□□□ 0.52
SREK1-209ENST00000520953 CNKSR1Q969H4 720 aa18.29■□□□□ 0.52
SREK1-209ENST00000520953 PODXL2Q9NZ53 605 aa18.29■□□□□ 0.52
SREK1-209ENST00000520953 GGA1Q9UJY5 639 aa18.29■□□□□ 0.52
SREK1-209ENST00000520953 MYO5AQ9Y4I1 1855 aaKnown RBP18.29■□□□□ 0.52
SREK1-209ENST00000520953 C6orf229H3BNL8 230 aa18.28■□□□□ 0.52
SREK1-209ENST00000520953 C21orf2O43822 256 aa18.28■□□□□ 0.52
SREK1-209ENST00000520953 FBXO33Q7Z6M2 555 aa18.28■□□□□ 0.52
SREK1-209ENST00000520953 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
SREK1-209ENST00000520953 EVI5LQ96CN4 794 aa18.28■□□□□ 0.52
SREK1-209ENST00000520953 JAG2Q9Y219 1238 aa18.28■□□□□ 0.52
SREK1-209ENST00000520953 LEMD3Q9Y2U8 911 aa18.28■□□□□ 0.52
SREK1-209ENST00000520953 CYP2E1P05181 493 aaPredicted RBP18.28■□□□□ 0.52
SREK1-209ENST00000520953 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
SREK1-209ENST00000520953 FSD1Q9BTV5 496 aa18.28■□□□□ 0.52
SREK1-209ENST00000520953 RIMBP2O15034 1052 aa18.27■□□□□ 0.52
SREK1-209ENST00000520953 MFAP1P55081 439 aaKnown RBP18.27■□□□□ 0.52
SREK1-209ENST00000520953 TMC4Q7Z404 712 aa18.27■□□□□ 0.52
SREK1-209ENST00000520953 MPNDQ8N594 471 aa18.27■□□□□ 0.52
SREK1-209ENST00000520953 TTLL6Q8N841 843 aa18.27■□□□□ 0.52
SREK1-209ENST00000520953 ZNF512BQ96KM6 892 aaPredicted RBP18.27■□□□□ 0.52
SREK1-209ENST00000520953 PIH1D3Q9NQM4 214 aaKnown RBP18.27■□□□□ 0.52
SREK1-209ENST00000520953 ATP2B4P23634 1241 aa18.27■□□□□ 0.51
SREK1-209ENST00000520953 SPATA5Q8NB90 893 aa18.27■□□□□ 0.51
SREK1-209ENST00000520953 SPON1Q9HCB6 807 aa18.27■□□□□ 0.51
SREK1-209ENST00000520953 SNED1Q8TER0 1413 aa18.26■□□□□ 0.51
SREK1-209ENST00000520953 HIBADHP31937 336 aaKnown RBP18.26■□□□□ 0.51
SREK1-209ENST00000520953 CAVIN4Q5BKX8 364 aa18.26■□□□□ 0.51
SREK1-209ENST00000520953 DPP8Q6V1X1 898 aaPredicted RBP18.26■□□□□ 0.51
SREK1-209ENST00000520953 VPS37DQ86XT2 251 aa18.26■□□□□ 0.51
SREK1-209ENST00000520953 FAM227BQ96M60 508 aa18.26■□□□□ 0.51
SREK1-209ENST00000520953 UQCRFS1P1P0C7P4 283 aa18.25■□□□□ 0.51
SREK1-209ENST00000520953 TGFB2P61812 414 aa18.25■□□□□ 0.51
SREK1-209ENST00000520953 BRCA1P38398 1863 aaKnown RBP18.25■□□□□ 0.51
SREK1-209ENST00000520953 CWC27Q6UX04 472 aaKnown RBP18.25■□□□□ 0.51
SREK1-209ENST00000520953 KBTBD3Q8NAB2 608 aa18.25■□□□□ 0.51
SREK1-209ENST00000520953 A0A0D9SFI3 127 aa18.24■□□□□ 0.51
SREK1-209ENST00000520953 NMIQ13287 307 aaPredicted RBP18.24■□□□□ 0.51
SREK1-209ENST00000520953 SEC62Q99442 399 aaKnown RBP18.24■□□□□ 0.51
SREK1-209ENST00000520953 CD2APQ9Y5K6 639 aa18.24■□□□□ 0.51
SREK1-209ENST00000520953 ESYT1Q9BSJ8 1104 aa18.23■□□□□ 0.51
SREK1-209ENST00000520953 CHAF1AQ13111 956 aaPredicted RBP18.23■□□□□ 0.51
SREK1-209ENST00000520953 PIM2Q9P1W9 311 aa18.23■□□□□ 0.51
SREK1-209ENST00000520953 MED23Q9ULK4 1368 aa18.22■□□□□ 0.51
SREK1-209ENST00000520953 DOK7Q18PE1 504 aa18.22■□□□□ 0.51
SREK1-209ENST00000520953 WASHC4Q2M389 1173 aa18.22■□□□□ 0.51
SREK1-209ENST00000520953 C15orf52Q6ZUT6 534 aaKnown RBP18.22■□□□□ 0.51
SREK1-209ENST00000520953 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
SREK1-209ENST00000520953 CHD4Q14839 1912 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms