RNA–Protein interactions for RNA: ENST00000520808.6

NPIPB4-205, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-205ENST00000520808 BMP1P13497 986 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 NFX1Q12986 1120 aaKnown RBP6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 TWISTNBQ3B726 338 aaPredicted RBP6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 TPRNQ4KMQ1 711 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 SULT6B1Q6IMI4 303 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 ARHGAP27Q6ZUM4 889 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 TMEM57Q8N5G2 664 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 ZBTB3Q9H5J0 574 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 SLC24A3Q9HC58 644 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 SENP2Q9HC62 589 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 MBIPQ9NS73 344 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 ZBTB40Q9NUA8 1239 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 MAP10Q9P2G4 905 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 LIMD1Q9UGP4 676 aa6.97□□□□□ -1.29
NPIPB4-205ENST00000520808 LMO7Q8WWI1 1683 aa6.96□□□□□ -1.29
NPIPB4-205ENST00000520808 PEAK1Q9H792 1746 aa6.96□□□□□ -1.29
NPIPB4-205ENST00000520808 CAPN5O15484 640 aaPredicted RBP6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 HTATSF1O43719 755 aaKnown RBP6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 BECN1Q14457 450 aa6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 SKAP1Q86WV1 359 aa6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 SMC5Q8IY18 1101 aa6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 GAS2L2Q8NHY3 880 aa6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 RTF1Q92541 710 aaKnown RBP6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 GCC1Q96CN9 775 aa6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 TNNQ9UQP3 1299 aa6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 PIK3C2AO00443 1686 aa6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 MAP3K19Q56UN5 1328 aa6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 IGSF1Q8N6C5 1336 aa6.96□□□□□ -1.3
NPIPB4-205ENST00000520808 CHD4Q14839 1912 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 CHL1O00533 1208 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 QPCTQ16769 361 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 LCE2CQ5TA81 110 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 MYSM1Q5VVJ2 828 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 TRIM46Q7Z4K8 759 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 BCS1LQ9Y276 419 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 SLIT3O75094 1523 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 ABCC4O15439 1325 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 SOS1Q07889 1333 aaPredicted RBP6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 CASZ1Q86V15 1759 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 KDRP35968 1356 aa6.95□□□□□ -1.3
NPIPB4-205ENST00000520808 F12P00748 615 aaPredicted RBP6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 VARSP26640 1264 aaKnown RBP6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 HOXC9P31274 260 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 HSP90AB2PQ58FF8 381 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 TRAPPC3LQ5T215 181 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 PRPF38BQ5VTL8 546 aaKnown RBP6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 NLGN1Q8N2Q7 840 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 TSC1Q92574 1164 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 FOXJ1Q92949 421 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 KIFC2Q96AC6 838 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 THUMPD2Q9BTF0 503 aaKnown RBP6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 CHMP4AQ9BY43 222 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 BABAM1Q9NWV8 329 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 SPG7Q9UQ90 795 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 RGPD3A6NKT7 1758 aaPredicted RBP6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 RGPD4Q7Z3J3 1758 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 PTPRCP08575 1304 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 RTL1A6NKG5 1358 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 LRRC37A3O60309 1634 aa6.94□□□□□ -1.3
NPIPB4-205ENST00000520808 TERTO14746 1132 aaKnown RBP6.93□□□□□ -1.3
NPIPB4-205ENST00000520808 ZBTB7BO15156 539 aaPredicted RBP6.93□□□□□ -1.3
NPIPB4-205ENST00000520808 PRKCSHP14314 528 aaPredicted RBP6.93□□□□□ -1.3
NPIPB4-205ENST00000520808 TGFB2P61812 414 aa6.93□□□□□ -1.3
NPIPB4-205ENST00000520808 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
NPIPB4-205ENST00000520808 TNS4Q8IZW8 715 aa6.93□□□□□ -1.3
NPIPB4-205ENST00000520808 TSPYL6Q8N831 410 aa6.93□□□□□ -1.3
NPIPB4-205ENST00000520808 PARP3Q9Y6F1 533 aa6.93□□□□□ -1.3
NPIPB4-205ENST00000520808 LTN1O94822 1766 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 ELL2O00472 640 aaPredicted RBP6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 SSFA2P28290 1259 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 RFC4P35249 363 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 NUCB1Q02818 461 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 NNTQ13423 1086 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 NBPF6Q5VWK0 638 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 INTS3Q68E01 1043 aaKnown RBP6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 USHBP1Q8N6Y0 703 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 C8orf58Q8NAV2 365 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 NBPF4Q96M43 638 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 CCDC87Q9NVE4 849 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 TMOD3Q9NYL9 352 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 RTCBQ9Y3I0 505 aaKnown RBP6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 PCDH11XQ9BZA7 1347 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 PCDH11YQ9BZA8 1340 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 SBF2Q86WG5 1849 aa6.92□□□□□ -1.3
NPIPB4-205ENST00000520808 CEP350Q5VT06 3117 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 LOC102724428A0A0B4J2F2 783 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 A0A0G2JLW4 131 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 GNAT3A8MTJ3 354 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 LILRB3O75022 631 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 MMP10P09238 476 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 SIK1P57059 783 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 FSTL1Q12841 308 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 DCTN1Q14203 1278 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 MTHFSDQ2M296 383 aaKnown RBP6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 CHD1LQ86WJ1 897 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 RPAP2Q8IXW5 612 aaPredicted RBP6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 MPNDQ8N594 471 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 TBC1D32Q96NH3 1257 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 WNK3Q9BYP7 1800 aa6.91□□□□□ -1.3
NPIPB4-205ENST00000520808 PALLDQ8WX93 1383 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms