RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 ZNF646O15015 1829 aaPredicted RBP10.42□□□□□ -0.74
VAPB-206ENST00000520497 ERC2O15083 957 aa10.42□□□□□ -0.74
VAPB-206ENST00000520497 GLRX3O76003 335 aaKnown RBP10.42□□□□□ -0.74
VAPB-206ENST00000520497 SRGNP10124 158 aa10.42□□□□□ -0.74
VAPB-206ENST00000520497 SDSP20132 328 aa10.42□□□□□ -0.74
VAPB-206ENST00000520497 ANP32AP39687 249 aaKnown RBP10.42□□□□□ -0.74
VAPB-206ENST00000520497 TIMM10P62072 90 aa10.42□□□□□ -0.74
VAPB-206ENST00000520497 PUM3Q15397 648 aaKnown RBP10.42□□□□□ -0.74
VAPB-206ENST00000520497 HELBQ8NG08 1087 aaPredicted RBP10.42□□□□□ -0.74
VAPB-206ENST00000520497 RPGRQ92834 1020 aaKnown RBP10.42□□□□□ -0.74
VAPB-206ENST00000520497 RBM17Q96I25 401 aaKnown RBP10.42□□□□□ -0.74
VAPB-206ENST00000520497 UPF2Q9HAU5 1272 aaKnown RBP10.42□□□□□ -0.74
VAPB-206ENST00000520497 RBM19Q9Y4C8 960 aaKnown RBP10.42□□□□□ -0.74
VAPB-206ENST00000520497 FER1L6Q2WGJ9 1857 aa10.42□□□□□ -0.74
VAPB-206ENST00000520497 TAF5LO75529 589 aa10.41□□□□□ -0.74
VAPB-206ENST00000520497 NPR1P16066 1061 aa10.41□□□□□ -0.74
VAPB-206ENST00000520497 ATP5JP18859 108 aa10.41□□□□□ -0.74
VAPB-206ENST00000520497 LPIN2Q92539 896 aa10.41□□□□□ -0.74
VAPB-206ENST00000520497 XAGE2Q96GT9 111 aa10.41□□□□□ -0.74
VAPB-206ENST00000520497 MAST2Q6P0Q8 1798 aa10.41□□□□□ -0.74
VAPB-206ENST00000520497 BBOX1O75936 387 aa10.4□□□□□ -0.74
VAPB-206ENST00000520497 ADORA1P30542 326 aa10.4□□□□□ -0.74
VAPB-206ENST00000520497 UBE4AQ14139 1066 aa10.4□□□□□ -0.74
VAPB-206ENST00000520497 TMC4Q7Z404 712 aa10.4□□□□□ -0.74
VAPB-206ENST00000520497 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.4□□□□□ -0.74
VAPB-206ENST00000520497 MASTLQ96GX5 879 aa10.4□□□□□ -0.74
VAPB-206ENST00000520497 ZNF512BQ96KM6 892 aaPredicted RBP10.4□□□□□ -0.74
VAPB-206ENST00000520497 NEUROD6Q96NK8 337 aa10.4□□□□□ -0.74
VAPB-206ENST00000520497 IRS2Q9Y4H2 1338 aa10.39□□□□□ -0.75
VAPB-206ENST00000520497 SNAP23O00161 211 aa10.39□□□□□ -0.75
VAPB-206ENST00000520497 SLC5A1P13866 664 aa10.39□□□□□ -0.75
VAPB-206ENST00000520497 STYK1Q6J9G0 422 aa10.39□□□□□ -0.75
VAPB-206ENST00000520497 SLC51AQ86UW1 340 aa10.39□□□□□ -0.75
VAPB-206ENST00000520497 ANKRD2Q9GZV1 360 aa10.39□□□□□ -0.75
VAPB-206ENST00000520497 SNED1Q8TER0 1413 aa10.39□□□□□ -0.75
VAPB-206ENST00000520497 SCN9AQ15858 1988 aa10.39□□□□□ -0.75
VAPB-206ENST00000520497 RFX7Q2KHR2 1363 aa10.39□□□□□ -0.75
VAPB-206ENST00000520497 ZNF804BA4D1E1 1349 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 XDHP47989 1333 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 CDC45O75419 566 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 IFIT1P09914 478 aaKnown RBP10.38□□□□□ -0.75
VAPB-206ENST00000520497 ARID4AP29374 1257 aaPredicted RBP10.38□□□□□ -0.75
VAPB-206ENST00000520497 ALDH1B1P30837 517 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 C1QTNF8P60827 252 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 CASC1Q6TDU7 716 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 TBC1D9Q6ZT07 1266 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 C2CD5Q86YS7 1000 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 HAUS7Q99871 368 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 BOLA2Q9H3K6 86 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 CD2APQ9Y5K6 639 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 MYH2Q9UKX2 1941 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 CDK5RAP2Q96SN8 1893 aa10.38□□□□□ -0.75
VAPB-206ENST00000520497 WTIPA6NIX2 430 aaPredicted RBP10.37□□□□□ -0.75
VAPB-206ENST00000520497 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 H0YIN7 160 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
VAPB-206ENST00000520497 MAP4K4O95819 1239 aaPredicted RBP10.37□□□□□ -0.75
VAPB-206ENST00000520497 PHKA1P46020 1223 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 CCDC158Q5M9N0 1113 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 CCDC102BQ68D86 513 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 C15orf52Q6ZUT6 534 aaKnown RBP10.37□□□□□ -0.75
VAPB-206ENST00000520497 SP8Q8IXZ3 490 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 CNTROBQ8N137 903 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 ZNF526Q8TF50 670 aaPredicted RBP10.37□□□□□ -0.75
VAPB-206ENST00000520497 EVI5LQ96CN4 794 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 PODXL2Q9NZ53 605 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 LEMD3Q9Y2U8 911 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 ATP6V0A2Q9Y487 856 aa10.37□□□□□ -0.75
VAPB-206ENST00000520497 DICER1Q9UPY3 1922 aaKnown RBP10.37□□□□□ -0.75
VAPB-206ENST00000520497 COL1A1P02452 1464 aaPredicted RBP10.36□□□□□ -0.75
VAPB-206ENST00000520497 SEC24BO95487 1268 aa10.36□□□□□ -0.75
VAPB-206ENST00000520497 CHRNA5P30532 468 aa10.36□□□□□ -0.75
VAPB-206ENST00000520497 MCAMP43121 646 aa10.36□□□□□ -0.75
VAPB-206ENST00000520497 GPSM2P81274 684 aa10.36□□□□□ -0.75
VAPB-206ENST00000520497 SCARF1Q14162 830 aa10.36□□□□□ -0.75
VAPB-206ENST00000520497 TTC39AQ5SRH9 613 aa10.36□□□□□ -0.75
VAPB-206ENST00000520497 GORABQ5T7V8 394 aa10.36□□□□□ -0.75
VAPB-206ENST00000520497 RILPL2Q969X0 211 aa10.36□□□□□ -0.75
VAPB-206ENST00000520497 GOLGB1Q14789 3259 aaKnown RBP10.36□□□□□ -0.75
VAPB-206ENST00000520497 LAMA4Q16363 1823 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 A0A0G2JLW4 131 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 UQCRFS1P1P0C7P4 283 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 CHMLP26374 656 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 KLRK1P26718 216 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 PRPF40BQ6NWY9 871 aaKnown RBP10.35□□□□□ -0.75
VAPB-206ENST00000520497 FBXO33Q7Z6M2 555 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 TICAM2Q86XR7 235 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 C7orf43Q8WVR3 580 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 CNKSR1Q969H4 720 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 ZNF622Q969S3 477 aaKnown RBP eCLIP10.35□□□□□ -0.751e-11■□□□□ 9.6
VAPB-206ENST00000520497 EDC3Q96F86 508 aaKnown RBP10.35□□□□□ -0.75
VAPB-206ENST00000520497 DDRGK1Q96HY6 314 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 FAM84BQ96KN1 310 aaPredicted RBP10.35□□□□□ -0.75
VAPB-206ENST00000520497 PAG1Q9NWQ8 432 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 ANKIB1Q9P2G1 1089 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 NDUFB9Q9Y6M9 179 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 SBF1O95248 1867 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 MED23Q9ULK4 1368 aa10.35□□□□□ -0.75
VAPB-206ENST00000520497 GRIN3BO60391 1043 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 KCNA3P22001 575 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms