RNA–Protein interactions for RNA: ENST00000520276.5

TRPS1-211, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 4,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-211ENST00000520276 EP400NLQ6ZTU2 488 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 LMO7Q8WWI1 1683 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 ERC2O15083 957 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 CCDC144BQ3MJ40 725 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 CCDC144CPQ8IYA2 1237 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 TMEM87AQ8NBN3 555 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 PLA2G4AP47712 749 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 TTLL7Q6ZT98 887 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 NLRP3Q96P20 1036 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
TRPS1-211ENST00000520276 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
TRPS1-211ENST00000520276 SOCS7O14512 581 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 GTF2A1P52655 376 aaPredicted RBP11.86□□□□□ -0.51
TRPS1-211ENST00000520276 SLC16A10Q8TF71 515 aa11.86□□□□□ -0.51
TRPS1-211ENST00000520276 GLI3P10071 1580 aa11.85□□□□□ -0.51
TRPS1-211ENST00000520276 PARP4Q9UKK3 1724 aaKnown RBP11.85□□□□□ -0.51
TRPS1-211ENST00000520276 MYO1CO00159 1063 aa11.85□□□□□ -0.51
TRPS1-211ENST00000520276 LARP6Q9BRS8 491 aaKnown RBP11.85□□□□□ -0.51
TRPS1-211ENST00000520276 TOMM22Q9NS69 142 aa11.85□□□□□ -0.51
TRPS1-211ENST00000520276 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.85□□□□□ -0.51
TRPS1-211ENST00000520276 ERCC6LQ2NKX8 1250 aa11.85□□□□□ -0.51
TRPS1-211ENST00000520276 CASC1Q6TDU7 716 aa11.85□□□□□ -0.51
TRPS1-211ENST00000520276 INTS4Q96HW7 963 aaKnown RBP11.85□□□□□ -0.51
TRPS1-211ENST00000520276 NARFQ9UHQ1 456 aa11.85□□□□□ -0.51
TRPS1-211ENST00000520276 CNTNAP4Q9C0A0 1308 aa11.85□□□□□ -0.51
TRPS1-211ENST00000520276 CAMK4Q16566 473 aa11.85□□□□□ -0.51
TRPS1-211ENST00000520276 CAMKK2Q96RR4 588 aa11.85□□□□□ -0.51
TRPS1-211ENST00000520276 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
TRPS1-211ENST00000520276 TSHZ3Q63HK5 1081 aa11.84□□□□□ -0.51
TRPS1-211ENST00000520276 CCDC85AQ96PX6 553 aaPredicted RBP11.84□□□□□ -0.51
TRPS1-211ENST00000520276 DCTPP1Q9H773 170 aa11.84□□□□□ -0.51
TRPS1-211ENST00000520276 ZCCHC17Q9NP64 241 aaKnown RBP11.84□□□□□ -0.51
TRPS1-211ENST00000520276 ABCA3Q99758 1704 aa11.84□□□□□ -0.51
TRPS1-211ENST00000520276 MMP10P09238 476 aa11.84□□□□□ -0.51
TRPS1-211ENST00000520276 TRMT1Q9NXH9 659 aaKnown RBP11.84□□□□□ -0.51
TRPS1-211ENST00000520276 KCNG1Q9UIX4 513 aa11.84□□□□□ -0.51
TRPS1-211ENST00000520276 COL15A1P39059 1388 aa11.84□□□□□ -0.51
TRPS1-211ENST00000520276 PNMA6AP0CW24 399 aaPredicted RBP11.84□□□□□ -0.51
TRPS1-211ENST00000520276 GORABQ5T7V8 394 aa11.84□□□□□ -0.51
TRPS1-211ENST00000520276 MRPL50Q8N5N7 158 aaKnown RBP11.84□□□□□ -0.51
TRPS1-211ENST00000520276 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
TRPS1-211ENST00000520276 SMARCE1Q969G3 411 aa11.84□□□□□ -0.51
TRPS1-211ENST00000520276 BRD2P25440 801 aaKnown RBP11.83□□□□□ -0.52
TRPS1-211ENST00000520276 CCDC57Q2TAC2 916 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 UBE3BQ7Z3V4 1068 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 MPHOSPH8Q99549 860 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 TRIM5Q9C035 493 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 MARF1Q9Y4F3 1742 aaKnown RBP11.83□□□□□ -0.52
TRPS1-211ENST00000520276 COL18A1P39060 1754 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 CLCN6P51797 869 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 BMS1Q14692 1282 aaKnown RBP11.83□□□□□ -0.52
TRPS1-211ENST00000520276 PROSER3Q2NL68 480 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 SMIM5Q71RC9 77 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 DDX46Q7L014 1031 aaKnown RBP11.83□□□□□ -0.52
TRPS1-211ENST00000520276 G2E3Q7L622 706 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 ERO1AQ96HE7 468 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 WWC3Q9ULE0 1092 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 FAM193AP78312 1265 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 TCIRG1Q13488 830 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 CREBRFQ8IUR6 639 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 FAM200AQ8TCP9 573 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 LRRC4BQ9NT99 713 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 ZNF219Q9P2Y4 722 aaPredicted RBP11.83□□□□□ -0.52
TRPS1-211ENST00000520276 MRVI1Q9Y6F6 885 aa11.83□□□□□ -0.52
TRPS1-211ENST00000520276 CCDC192P0DO97 292 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 H2AFXP16104 143 aaPredicted RBP11.82□□□□□ -0.52
TRPS1-211ENST00000520276 GIGYF2Q6Y7W6 1299 aaKnown RBP11.82□□□□□ -0.52
TRPS1-211ENST00000520276 METTL22Q9BUU2 404 aaPredicted RBP11.82□□□□□ -0.52
TRPS1-211ENST00000520276 LRRFIP2Q9Y608 721 aaKnown RBP11.82□□□□□ -0.52
TRPS1-211ENST00000520276 SH3TC1Q8TE82 1336 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 SLFNL1Q499Z3 407 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 ICE2Q659A1 982 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 CCDC191Q8NCU4 936 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 USP54Q70EL1 1684 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 ERVV-1B6SEH8 477 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 SERPINB2P05120 415 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 CASQ1P31415 396 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 EIF5P55010 431 aaKnown RBP11.82□□□□□ -0.52
TRPS1-211ENST00000520276 DNM1Q05193 864 aaKnown RBP11.82□□□□□ -0.52
TRPS1-211ENST00000520276 PTPN14Q15678 1187 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 CLEC4GQ6UXB4 293 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 CKAP2LQ8IYA6 745 aa11.82□□□□□ -0.52
TRPS1-211ENST00000520276 GNAI2P04899 355 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 ZSCAN22P10073 491 aaPredicted RBP11.81□□□□□ -0.52
TRPS1-211ENST00000520276 IGHMBP2P38935 993 aaKnown RBP11.81□□□□□ -0.52
TRPS1-211ENST00000520276 MCM2P49736 904 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 ZNF75DP51815 510 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 CBX8Q9HC52 389 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 H0YIN7 160 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 ALDH1L1O75891 902 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 APPP05067 770 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 MUM1L1Q5H9M0 696 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 CCDC24Q8N4L8 307 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 CNNM1Q9NRU3 951 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 SLU7O95391 586 aaKnown RBP11.81□□□□□ -0.52
TRPS1-211ENST00000520276 G3BP1Q13283 466 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRPS1-211ENST00000520276 PLA2G4DQ86XP0 818 aa11.81□□□□□ -0.52
TRPS1-211ENST00000520276 COL23A1Q86Y22 540 aaPredicted RBP11.81□□□□□ -0.52
TRPS1-211ENST00000520276 ARHGAP45Q92619 1136 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms