RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 RABL6Q3YEC7 729 aaPredicted RBP17.73■□□□□ 0.43
VEGFA-221ENST00000520265 ZKSCAN2Q63HK3 967 aa17.73■□□□□ 0.43
VEGFA-221ENST00000520265 RSBN1LQ6PCB5 846 aaPredicted RBP17.73■□□□□ 0.43
VEGFA-221ENST00000520265 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
VEGFA-221ENST00000520265 ZNF804AQ7Z570 1209 aa17.73■□□□□ 0.43
VEGFA-221ENST00000520265 KLHDC4Q8TBB5 520 aa17.73■□□□□ 0.43
VEGFA-221ENST00000520265 HDAC5Q9UQL6 1122 aa17.73■□□□□ 0.43
VEGFA-221ENST00000520265 TNNQ9UQP3 1299 aa17.73■□□□□ 0.43
VEGFA-221ENST00000520265 LRRFIP2Q9Y608 721 aaKnown RBP17.73■□□□□ 0.43
VEGFA-221ENST00000520265 VIL1P09327 827 aaKnown RBP17.72■□□□□ 0.43
VEGFA-221ENST00000520265 KIF4BQ2VIQ3 1234 aa17.72■□□□□ 0.43
VEGFA-221ENST00000520265 ARHGAP45Q92619 1136 aa17.72■□□□□ 0.43
VEGFA-221ENST00000520265 DPF2Q92785 391 aa17.72■□□□□ 0.43
VEGFA-221ENST00000520265 MEIS3Q99687 375 aa17.72■□□□□ 0.43
VEGFA-221ENST00000520265 ZNF408Q9H9D4 720 aa17.72■□□□□ 0.43
VEGFA-221ENST00000520265 A0A1B0GUL6 1792 aa17.71■□□□□ 0.43
VEGFA-221ENST00000520265 ADAMTSL1Q8N6G6 1762 aa17.71■□□□□ 0.43
VEGFA-221ENST00000520265 CEP350Q5VT06 3117 aa17.71■□□□□ 0.43
VEGFA-221ENST00000520265 GTF2IP78347 998 aa17.71■□□□□ 0.43
VEGFA-221ENST00000520265 LRRC24Q50LG9 513 aa17.71■□□□□ 0.43
VEGFA-221ENST00000520265 MXD3Q9BW11 206 aa17.71■□□□□ 0.43
VEGFA-221ENST00000520265 SIL1Q9H173 461 aa17.71■□□□□ 0.43
VEGFA-221ENST00000520265 ABT1Q9ULW3 272 aaKnown RBP17.71■□□□□ 0.43
VEGFA-221ENST00000520265 MROH5Q6ZUA9 1318 aa17.71■□□□□ 0.42
VEGFA-221ENST00000520265 TRAF5O00463 557 aa17.7■□□□□ 0.42
VEGFA-221ENST00000520265 GNAI3P08754 354 aa17.7■□□□□ 0.42
VEGFA-221ENST00000520265 TTLL5Q6EMB2 1281 aa17.7■□□□□ 0.42
VEGFA-221ENST00000520265 VPS37DQ86XT2 251 aa17.7■□□□□ 0.42
VEGFA-221ENST00000520265 GLIS2Q9BZE0 524 aaPredicted RBP17.7■□□□□ 0.42
VEGFA-221ENST00000520265 MKRN1Q9UHC7 482 aaKnown RBP17.7■□□□□ 0.42
VEGFA-221ENST00000520265 JAG2Q9Y219 1238 aa17.7■□□□□ 0.42
VEGFA-221ENST00000520265 TMEM88BA6NKF7 163 aa17.69■□□□□ 0.42
VEGFA-221ENST00000520265 ITGBL1O95965 494 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-221ENST00000520265 USP17L8P0C7I0 530 aa17.69■□□□□ 0.42
VEGFA-221ENST00000520265 INTS3Q68E01 1043 aaKnown RBP17.69■□□□□ 0.42
VEGFA-221ENST00000520265 PAXIP1Q6ZW49 1069 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-221ENST00000520265 AGBL3Q8NEM8 1001 aa17.69■□□□□ 0.42
VEGFA-221ENST00000520265 CD209Q9NNX6 404 aa17.69■□□□□ 0.42
VEGFA-221ENST00000520265 CREBZFQ9NS37 354 aa17.69■□□□□ 0.42
VEGFA-221ENST00000520265 PASKQ96RG2 1323 aa17.69■□□□□ 0.42
VEGFA-221ENST00000520265 FRAT2O75474 233 aaPredicted RBP17.68■□□□□ 0.42
VEGFA-221ENST00000520265 EGFRP00533 1210 aa17.68■□□□□ 0.42
VEGFA-221ENST00000520265 HIRAP54198 1017 aaPredicted RBP17.68■□□□□ 0.42
VEGFA-221ENST00000520265 FMR1Q06787 632 aaKnown RBP eCLIP17.68■□□□□ 0.42
VEGFA-221ENST00000520265 STRIP1Q5VSL9 837 aa17.68■□□□□ 0.42
VEGFA-221ENST00000520265 ITPRIPQ8IWB1 547 aa17.68■□□□□ 0.42
VEGFA-221ENST00000520265 OGFOD1Q8N543 542 aa17.68■□□□□ 0.42
VEGFA-221ENST00000520265 DCPSQ96C86 337 aaKnown RBP17.68■□□□□ 0.42
VEGFA-221ENST00000520265 KLRG1Q96E93 195 aa17.68■□□□□ 0.42
VEGFA-221ENST00000520265 GYG1P46976 350 aa17.67■□□□□ 0.42
VEGFA-221ENST00000520265 DACT2Q5SW24 774 aa17.67■□□□□ 0.42
VEGFA-221ENST00000520265 KIAA0825Q8IV33 1275 aa17.67■□□□□ 0.42
VEGFA-221ENST00000520265 TMEM57Q8N5G2 664 aa17.67■□□□□ 0.42
VEGFA-221ENST00000520265 PSME4Q14997 1843 aa17.67■□□□□ 0.42
VEGFA-221ENST00000520265 MYO3BQ8WXR4 1341 aa17.67■□□□□ 0.42
VEGFA-221ENST00000520265 F8W031 263 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-221ENST00000520265 GRM1Q13255 1194 aa17.66■□□□□ 0.42
VEGFA-221ENST00000520265 UBE4AQ14139 1066 aa17.66■□□□□ 0.42
VEGFA-221ENST00000520265 ZC3H15Q8WU90 426 aaKnown RBP17.66■□□□□ 0.42
VEGFA-221ENST00000520265 MYOZ2Q9NPC6 264 aa17.66■□□□□ 0.42
VEGFA-221ENST00000520265 GGA3Q9NZ52 723 aa17.66■□□□□ 0.42
VEGFA-221ENST00000520265 HDAC9Q9UKV0 1011 aa17.66■□□□□ 0.42
VEGFA-221ENST00000520265 RIPOR2Q9Y4F9 1068 aa17.66■□□□□ 0.42
VEGFA-221ENST00000520265 EYA2O00167 538 aa17.65■□□□□ 0.42
VEGFA-221ENST00000520265 SRGAP3O43295 1099 aa17.65■□□□□ 0.42
VEGFA-221ENST00000520265 CELF2O95319 508 aaKnown RBP17.65■□□□□ 0.42
VEGFA-221ENST00000520265 GNAI2P04899 355 aa17.65■□□□□ 0.42
VEGFA-221ENST00000520265 HIBADHP31937 336 aaKnown RBP17.65■□□□□ 0.42
VEGFA-221ENST00000520265 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
VEGFA-221ENST00000520265 CDC37L1Q7L3B6 337 aa17.65■□□□□ 0.42
VEGFA-221ENST00000520265 KRT26Q7Z3Y9 468 aa17.65■□□□□ 0.42
VEGFA-221ENST00000520265 USP48Q86UV5 1035 aa17.65■□□□□ 0.42
VEGFA-221ENST00000520265 DZIP1LQ8IYY4 767 aaKnown RBP17.65■□□□□ 0.42
VEGFA-221ENST00000520265 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
VEGFA-221ENST00000520265 IQSEC3Q9UPP2 1182 aaPredicted RBP17.65■□□□□ 0.42
VEGFA-221ENST00000520265 PA2G4Q9UQ80 394 aaKnown RBP17.65■□□□□ 0.42
VEGFA-221ENST00000520265 PDE8BO95263 885 aa17.64■□□□□ 0.41
VEGFA-221ENST00000520265 IFIT1P09914 478 aaKnown RBP17.64■□□□□ 0.41
VEGFA-221ENST00000520265 CHAF1AQ13111 956 aaPredicted RBP17.64■□□□□ 0.41
VEGFA-221ENST00000520265 SCARF1Q14162 830 aa17.64■□□□□ 0.41
VEGFA-221ENST00000520265 PUM3Q15397 648 aaKnown RBP17.64■□□□□ 0.41
VEGFA-221ENST00000520265 C15orf52Q6ZUT6 534 aaKnown RBP17.64■□□□□ 0.41
VEGFA-221ENST00000520265 SULF1Q8IWU6 871 aa17.64■□□□□ 0.41
VEGFA-221ENST00000520265 DNAJC5GQ8N7S2 189 aa17.64■□□□□ 0.41
VEGFA-221ENST00000520265 ADM5C9JUS6 153 aa17.63■□□□□ 0.41
VEGFA-221ENST00000520265 SASH1O94885 1247 aa17.63■□□□□ 0.41
VEGFA-221ENST00000520265 SLC5A1P13866 664 aa17.63■□□□□ 0.41
VEGFA-221ENST00000520265 RFX5P48382 616 aaPredicted RBP17.63■□□□□ 0.41
VEGFA-221ENST00000520265 PTPN12Q05209 780 aaKnown RBP17.63■□□□□ 0.41
VEGFA-221ENST00000520265 ANGEL2Q5VTE6 544 aaKnown RBP17.63■□□□□ 0.41
VEGFA-221ENST00000520265 ASTN2O75129 1339 aaPredicted RBP17.63■□□□□ 0.41
VEGFA-221ENST00000520265 IL1R1P14778 569 aa17.62■□□□□ 0.41
VEGFA-221ENST00000520265 RBM5P52756 815 aaKnown RBP eCLIP17.62■□□□□ 0.411e-9■□□□□ 9.1
VEGFA-221ENST00000520265 ZNF280AP59817 542 aaPredicted RBP17.62■□□□□ 0.41
VEGFA-221ENST00000520265 GMLQ99445 158 aa17.62■□□□□ 0.41
VEGFA-221ENST00000520265 C1orf115Q9H7X2 142 aa17.62■□□□□ 0.41
VEGFA-221ENST00000520265 CEP126Q9P2H0 1117 aa17.62■□□□□ 0.41
VEGFA-221ENST00000520265 IRS2Q9Y4H2 1338 aa17.62■□□□□ 0.41
VEGFA-221ENST00000520265 TRPM7Q96QT4 1865 aa17.61■□□□□ 0.41
VEGFA-221ENST00000520265 DLK2Q6UY11 383 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms