RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 ARID4AP29374 1257 aaPredicted RBP32.27■■■□□ 2.76
COL13A1-212ENST00000520133 MCM4P33991 863 aa32.27■■■□□ 2.76
COL13A1-212ENST00000520133 MCAMP43121 646 aa32.27■■■□□ 2.76
COL13A1-212ENST00000520133 SLC27A3Q5K4L6 730 aa32.27■■■□□ 2.76
COL13A1-212ENST00000520133 TPTE2Q6XPS3 522 aa32.27■■■□□ 2.76
COL13A1-212ENST00000520133 RUFY3Q7L099 469 aa32.27■■■□□ 2.76
COL13A1-212ENST00000520133 TNPO1Q92973 898 aaKnown RBP32.27■■■□□ 2.76
COL13A1-212ENST00000520133 KRT32Q14532 448 aa32.26■■■□□ 2.76
COL13A1-212ENST00000520133 ANKRD18AQ8IVF6 992 aa32.26■■■□□ 2.76
COL13A1-212ENST00000520133 ZGPATQ8N5A5 531 aaKnown RBP32.26■■■□□ 2.76
COL13A1-212ENST00000520133 AK2P54819 239 aa32.26■■■□□ 2.75
COL13A1-212ENST00000520133 GBP4Q96PP9 640 aa32.26■■■□□ 2.75
COL13A1-212ENST00000520133 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.26■■■□□ 2.75
COL13A1-212ENST00000520133 LRRC4BQ9NT99 713 aa32.26■■■□□ 2.75
COL13A1-212ENST00000520133 PDRG1Q9NUG6 133 aa32.26■■■□□ 2.75
COL13A1-212ENST00000520133 RPAP1Q9BWH6 1393 aaPredicted RBP32.26■■■□□ 2.75
COL13A1-212ENST00000520133 ZNF772Q68DY9 489 aaPredicted RBP32.25■■■□□ 2.75
COL13A1-212ENST00000520133 AMIGO3Q86WK7 504 aa32.25■■■□□ 2.75
COL13A1-212ENST00000520133 DSCC1Q9BVC3 393 aa32.25■■■□□ 2.75
COL13A1-212ENST00000520133 LIMCH1Q9UPQ0 1083 aa32.25■■■□□ 2.75
COL13A1-212ENST00000520133 PHF14O94880 888 aa32.24■■■□□ 2.75
COL13A1-212ENST00000520133 ZSCAN25Q6NSZ9 544 aa32.24■■■□□ 2.75
COL13A1-212ENST00000520133 NLRP3Q96P20 1036 aa32.24■■■□□ 2.75
COL13A1-212ENST00000520133 HMGB2P26583 209 aaKnown RBP32.23■■■□□ 2.75
COL13A1-212ENST00000520133 PHKA1P46020 1223 aa32.23■■■□□ 2.75
COL13A1-212ENST00000520133 MAST3O60307 1309 aa32.23■■■□□ 2.75
COL13A1-212ENST00000520133 CHRNDQ07001 517 aa32.23■■■□□ 2.75
COL13A1-212ENST00000520133 UBR3Q6ZT12 1888 aa32.22■■■□□ 2.75
COL13A1-212ENST00000520133 RBM6P78332 1123 aaKnown RBP32.22■■■□□ 2.75
COL13A1-212ENST00000520133 PI16Q6UXB8 463 aa32.22■■■□□ 2.75
COL13A1-212ENST00000520133 BLOC1S2Q6QNY1 142 aa32.21■■■□□ 2.75
COL13A1-212ENST00000520133 C3orf67Q6ZVT6 689 aa32.21■■■□□ 2.75
COL13A1-212ENST00000520133 BSDC1Q9NW68 430 aaPredicted RBP32.21■■■□□ 2.75
COL13A1-212ENST00000520133 TRIM37O94972 964 aa32.21■■■□□ 2.75
COL13A1-212ENST00000520133 CPA1P15085 419 aa32.21■■■□□ 2.75
COL13A1-212ENST00000520133 WASHC4Q2M389 1173 aa32.21■■■□□ 2.75
COL13A1-212ENST00000520133 SLFNL1Q499Z3 407 aa32.21■■■□□ 2.75
COL13A1-212ENST00000520133 DDX11L8A8MPP1 907 aa32.2■■■□□ 2.75
COL13A1-212ENST00000520133 APPBP2Q92624 585 aa32.2■■■□□ 2.75
COL13A1-212ENST00000520133 TAF1P21675 1872 aa32.2■■■□□ 2.74
COL13A1-212ENST00000520133 ZSCAN31Q96LW9 406 aaPredicted RBP32.19■■■□□ 2.74
COL13A1-212ENST00000520133 CYP2E1P05181 493 aaPredicted RBP32.19■■■□□ 2.74
COL13A1-212ENST00000520133 OSBP2Q969R2 916 aa32.19■■■□□ 2.74
COL13A1-212ENST00000520133 CARMIL3Q8ND23 1372 aa32.18■■■□□ 2.74
COL13A1-212ENST00000520133 A0A1B0GUL6 1792 aa32.18■■■□□ 2.74
COL13A1-212ENST00000520133 HSPD1P10809 573 aaKnown RBP32.18■■■□□ 2.74
COL13A1-212ENST00000520133 M0R2C6 588 aa32.17■■■□□ 2.74
COL13A1-212ENST00000520133 NPHP1O15259 732 aa32.17■■■□□ 2.74
COL13A1-212ENST00000520133 ANKRD1Q15327 319 aa32.17■■■□□ 2.74
COL13A1-212ENST00000520133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.16■■■□□ 2.74
COL13A1-212ENST00000520133 MYO5AQ9Y4I1 1855 aaKnown RBP32.16■■■□□ 2.74
COL13A1-212ENST00000520133 CYP21A2P08686 494 aa32.16■■■□□ 2.74
COL13A1-212ENST00000520133 RPS6KB1P23443 525 aa32.16■■■□□ 2.74
COL13A1-212ENST00000520133 SPATA5Q8NB90 893 aa32.16■■■□□ 2.74
COL13A1-212ENST00000520133 ALDH8A1Q9H2A2 487 aaPredicted RBP32.16■■■□□ 2.74
COL13A1-212ENST00000520133 SH2B1Q9NRF2 756 aaPredicted RBP32.16■■■□□ 2.74
COL13A1-212ENST00000520133 COL4A1P02462 1669 aa32.16■■■□□ 2.74
COL13A1-212ENST00000520133 CLEC17AQ6ZS10 378 aa32.15■■■□□ 2.74
COL13A1-212ENST00000520133 SNAP23O00161 211 aa32.14■■■□□ 2.74
COL13A1-212ENST00000520133 ADD2P35612 726 aa32.14■■■□□ 2.74
COL13A1-212ENST00000520133 NEK1Q96PY6 1258 aa32.14■■■□□ 2.74
COL13A1-212ENST00000520133 UBE4AQ14139 1066 aa32.14■■■□□ 2.74
COL13A1-212ENST00000520133 ZSCAN21Q9Y5A6 473 aaPredicted RBP32.14■■■□□ 2.74
COL13A1-212ENST00000520133 TAF6LQ9Y6J9 622 aa32.14■■■□□ 2.74
COL13A1-212ENST00000520133 PTMSP20962 102 aa32.13■■■□□ 2.73
COL13A1-212ENST00000520133 UBE3CQ15386 1083 aa32.13■■■□□ 2.73
COL13A1-212ENST00000520133 SLC9C2Q5TAH2 1124 aa32.13■■■□□ 2.73
COL13A1-212ENST00000520133 CELF1Q92879 486 aaKnown RBP32.13■■■□□ 2.73
COL13A1-212ENST00000520133 PIH1D3Q9NQM4 214 aaKnown RBP32.13■■■□□ 2.73
COL13A1-212ENST00000520133 IDH1O75874 414 aaKnown RBP32.12■■■□□ 2.73
COL13A1-212ENST00000520133 RPS8P62241 208 aaKnown RBP32.12■■■□□ 2.73
COL13A1-212ENST00000520133 RASGRF1Q13972 1273 aa32.12■■■□□ 2.73
COL13A1-212ENST00000520133 NFIXQ14938 502 aa32.12■■■□□ 2.73
COL13A1-212ENST00000520133 MINPP1Q9UNW1 487 aa32.12■■■□□ 2.73
COL13A1-212ENST00000520133 DOCK2Q92608 1830 aa32.12■■■□□ 2.73
COL13A1-212ENST00000520133 CTNNA3Q9UI47 895 aa32.12■■■□□ 2.73
COL13A1-212ENST00000520133 HMGB1P09429 215 aaKnown RBP32.11■■■□□ 2.73
COL13A1-212ENST00000520133 BCAMP50895 628 aa32.1■■■□□ 2.73
COL13A1-212ENST00000520133 PUS7LQ9H0K6 701 aaKnown RBP32.1■■■□□ 2.73
COL13A1-212ENST00000520133 GOLGA6L22H0YM25 854 aa32.1■■■□□ 2.73
COL13A1-212ENST00000520133 CNBD1Q8NA66 436 aa32.1■■■□□ 2.73
COL13A1-212ENST00000520133 MAP3K12Q12852 859 aa32.09■■■□□ 2.73
COL13A1-212ENST00000520133 PKP1Q13835 747 aa32.09■■■□□ 2.73
COL13A1-212ENST00000520133 LARP6Q9BRS8 491 aaKnown RBP32.09■■■□□ 2.73
COL13A1-212ENST00000520133 GNL3LQ9NVN8 582 aaKnown RBP32.09■■■□□ 2.73
COL13A1-212ENST00000520133 LAMA4Q16363 1823 aa32.08■■■□□ 2.73
COL13A1-212ENST00000520133 EP400Q96L91 3159 aa32.08■■■□□ 2.73
COL13A1-212ENST00000520133 GPAA1O43292 621 aa32.08■■■□□ 2.73
COL13A1-212ENST00000520133 TXNRD1Q16881 649 aa32.08■■■□□ 2.73
COL13A1-212ENST00000520133 CCDC24Q8N4L8 307 aa32.07■■■□□ 2.73
COL13A1-212ENST00000520133 ANKRD2Q9GZV1 360 aa32.07■■■□□ 2.73
COL13A1-212ENST00000520133 PDE6AP16499 860 aa32.07■■■□□ 2.72
COL13A1-212ENST00000520133 ZNF532Q9HCE3 1301 aa32.06■■■□□ 2.72
COL13A1-212ENST00000520133 BAG4O95429 457 aaKnown RBP32.06■■■□□ 2.72
COL13A1-212ENST00000520133 GYS1P13807 737 aa32.06■■■□□ 2.72
COL13A1-212ENST00000520133 CAVIN4Q5BKX8 364 aa32.06■■■□□ 2.72
COL13A1-212ENST00000520133 GSE1Q14687 1217 aa32.05■■■□□ 2.72
COL13A1-212ENST00000520133 TNRC6CQ9HCJ0 1690 aaKnown RBP32.05■■■□□ 2.72
COL13A1-212ENST00000520133 ZNF804BA4D1E1 1349 aa32.05■■■□□ 2.72
COL13A1-212ENST00000520133 LARGE1O95461 756 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms