RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 ANP32CO43423 234 aa20.26■□□□□ 0.83
VPS37A-204ENST00000519381 DGKZQ13574 1117 aa20.26■□□□□ 0.83
VPS37A-204ENST00000519381 ASTN2O75129 1339 aaPredicted RBP20.26■□□□□ 0.83
VPS37A-204ENST00000519381 MYO3BQ8WXR4 1341 aa20.26■□□□□ 0.83
VPS37A-204ENST00000519381 PITPNM2Q9BZ72 1349 aa20.26■□□□□ 0.83
VPS37A-204ENST00000519381 CASP8AP2Q9UKL3 1982 aa20.25■□□□□ 0.83
VPS37A-204ENST00000519381 ITGA6P23229 1130 aa20.25■□□□□ 0.83
VPS37A-204ENST00000519381 NF2P35240 595 aa20.25■□□□□ 0.83
VPS37A-204ENST00000519381 KIF23Q02241 960 aaPredicted RBP20.25■□□□□ 0.83
VPS37A-204ENST00000519381 G2E3Q7L622 706 aa20.25■□□□□ 0.83
VPS37A-204ENST00000519381 MCOLN1Q9GZU1 580 aa20.25■□□□□ 0.83
VPS37A-204ENST00000519381 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
VPS37A-204ENST00000519381 COA1Q9GZY4 146 aa20.25■□□□□ 0.83
VPS37A-204ENST00000519381 LEMD3Q9Y2U8 911 aa20.25■□□□□ 0.83
VPS37A-204ENST00000519381 SALL2Q9Y467 1007 aaPredicted RBP20.25■□□□□ 0.83
VPS37A-204ENST00000519381 FKBP1BP68106 108 aa20.24■□□□□ 0.83
VPS37A-204ENST00000519381 TTLL12Q14166 644 aaPredicted RBP20.24■□□□□ 0.83
VPS37A-204ENST00000519381 DNAAF4Q8WXU2 420 aa20.24■□□□□ 0.83
VPS37A-204ENST00000519381 ZIC5Q96T25 663 aa20.24■□□□□ 0.83
VPS37A-204ENST00000519381 SAGE1Q9NXZ1 904 aa20.24■□□□□ 0.83
VPS37A-204ENST00000519381 CHMP3Q9Y3E7 222 aa20.24■□□□□ 0.83
VPS37A-204ENST00000519381 FAM155AB1AL88 458 aaPredicted RBP20.23■□□□□ 0.83
VPS37A-204ENST00000519381 H7C1W4 665 aa20.23■□□□□ 0.83
VPS37A-204ENST00000519381 SLC10A3P09131 477 aa20.23■□□□□ 0.83
VPS37A-204ENST00000519381 GCKRQ14397 625 aa20.23■□□□□ 0.83
VPS37A-204ENST00000519381 FAM161AQ3B820 660 aa20.23■□□□□ 0.83
VPS37A-204ENST00000519381 CCDC184Q52MB2 194 aa20.23■□□□□ 0.83
VPS37A-204ENST00000519381 HDAC9Q9UKV0 1011 aa20.23■□□□□ 0.83
VPS37A-204ENST00000519381 PAPPA2Q9BXP8 1791 aa20.23■□□□□ 0.83
VPS37A-204ENST00000519381 FANCIQ9NVI1 1328 aa20.23■□□□□ 0.83
VPS37A-204ENST00000519381 AKAP11Q9UKA4 1901 aa20.22■□□□□ 0.83
VPS37A-204ENST00000519381 STRIP1Q5VSL9 837 aa20.22■□□□□ 0.83
VPS37A-204ENST00000519381 LINS1Q8NG48 757 aa20.22■□□□□ 0.83
VPS37A-204ENST00000519381 ZNF804BA4D1E1 1349 aa20.22■□□□□ 0.83
VPS37A-204ENST00000519381 ANKRD18BA2A2Z9 1011 aa20.21■□□□□ 0.83
VPS37A-204ENST00000519381 REM2Q8IYK8 340 aaPredicted RBP20.21■□□□□ 0.83
VPS37A-204ENST00000519381 GMLQ99445 158 aa20.21■□□□□ 0.83
VPS37A-204ENST00000519381 PLA2G12BQ9BX93 195 aa20.21■□□□□ 0.83
VPS37A-204ENST00000519381 CACNA1FO60840 1977 aa20.21■□□□□ 0.83
VPS37A-204ENST00000519381 TRPA1O75762 1119 aa20.2■□□□□ 0.82
VPS37A-204ENST00000519381 NCBP3Q53F19 620 aaKnown RBP20.2■□□□□ 0.82
VPS37A-204ENST00000519381 DACT2Q5SW24 774 aa20.2■□□□□ 0.82
VPS37A-204ENST00000519381 MMP14P50281 582 aa20.19■□□□□ 0.82
VPS37A-204ENST00000519381 MLLT1Q03111 559 aaPredicted RBP20.19■□□□□ 0.82
VPS37A-204ENST00000519381 TAF7LQ5H9L4 462 aa20.19■□□□□ 0.82
VPS37A-204ENST00000519381 TTLL5Q6EMB2 1281 aa20.19■□□□□ 0.82
VPS37A-204ENST00000519381 RASAL3Q86YV0 1011 aa20.19■□□□□ 0.82
VPS37A-204ENST00000519381 WDR63Q8IWG1 891 aa20.19■□□□□ 0.82
VPS37A-204ENST00000519381 MXD3Q9BW11 206 aa20.19■□□□□ 0.82
VPS37A-204ENST00000519381 IFIT5Q13325 482 aaKnown RBP20.18■□□□□ 0.82
VPS37A-204ENST00000519381 NBPF9Q3BBW0 867 aa20.18■□□□□ 0.82
VPS37A-204ENST00000519381 RNF186Q9NXI6 227 aa20.18■□□□□ 0.82
VPS37A-204ENST00000519381 SCAF8Q9UPN6 1271 aaKnown RBP20.18■□□□□ 0.82
VPS37A-204ENST00000519381 WTIPA6NIX2 430 aaPredicted RBP20.17■□□□□ 0.82
VPS37A-204ENST00000519381 SASH1O94885 1247 aa20.17■□□□□ 0.82
VPS37A-204ENST00000519381 GTF2IP78347 998 aa20.17■□□□□ 0.82
VPS37A-204ENST00000519381 CHRNDQ07001 517 aa20.17■□□□□ 0.82
VPS37A-204ENST00000519381 APOBEC3FQ8IUX4 373 aaKnown RBP20.17■□□□□ 0.82
VPS37A-204ENST00000519381 KIAA0825Q8IV33 1275 aa20.17■□□□□ 0.82
VPS37A-204ENST00000519381 WNT10BO00744 389 aa20.16■□□□□ 0.82
VPS37A-204ENST00000519381 ZEB1P37275 1124 aaPredicted RBP20.16■□□□□ 0.82
VPS37A-204ENST00000519381 EXOSC9Q06265 439 aaKnown RBP20.16■□□□□ 0.82
VPS37A-204ENST00000519381 UBE2Q2LH0YL09 131 aa20.15■□□□□ 0.82
VPS37A-204ENST00000519381 CSF1RP07333 972 aa20.15■□□□□ 0.82
VPS37A-204ENST00000519381 PRAMEF18Q5VWM3 479 aa20.15■□□□□ 0.82
VPS37A-204ENST00000519381 ARMC9Q7Z3E5 817 aa20.15■□□□□ 0.82
VPS37A-204ENST00000519381 ZNF804AQ7Z570 1209 aa20.15■□□□□ 0.82
VPS37A-204ENST00000519381 TXNRD3Q86VQ6 643 aa20.15■□□□□ 0.82
VPS37A-204ENST00000519381 CSRNP1Q96S65 589 aa20.15■□□□□ 0.82
VPS37A-204ENST00000519381 VAMP4O75379 141 aa20.14■□□□□ 0.81
VPS37A-204ENST00000519381 KLRK1P26718 216 aa20.14■□□□□ 0.81
VPS37A-204ENST00000519381 CCDC57Q2TAC2 916 aa20.14■□□□□ 0.81
VPS37A-204ENST00000519381 MOB2Q70IA6 237 aa20.14■□□□□ 0.81
VPS37A-204ENST00000519381 F6X3S4 739 aa20.13■□□□□ 0.81
VPS37A-204ENST00000519381 CASP7P55210 303 aa20.13■□□□□ 0.81
VPS37A-204ENST00000519381 C9orf78Q9NZ63 289 aaPredicted RBP20.13■□□□□ 0.81
VPS37A-204ENST00000519381 MYO1BO43795 1136 aa20.12■□□□□ 0.81
VPS37A-204ENST00000519381 PRKG1Q13976 671 aa20.12■□□□□ 0.81
VPS37A-204ENST00000519381 DLGAP5Q15398 846 aa20.12■□□□□ 0.81
VPS37A-204ENST00000519381 HELBQ8NG08 1087 aaPredicted RBP20.12■□□□□ 0.81
VPS37A-204ENST00000519381 CD209Q9NNX6 404 aa20.12■□□□□ 0.81
VPS37A-204ENST00000519381 CNNM1Q9NRU3 951 aa20.12■□□□□ 0.81
VPS37A-204ENST00000519381 PLIN1O60240 522 aa20.11■□□□□ 0.81
VPS37A-204ENST00000519381 TAF5LO75529 589 aa20.11■□□□□ 0.81
VPS37A-204ENST00000519381 SREBF2Q12772 1141 aa20.11■□□□□ 0.81
VPS37A-204ENST00000519381 MKRN3Q13064 507 aaKnown RBP20.11■□□□□ 0.81
VPS37A-204ENST00000519381 SLC4A10Q6U841 1118 aa20.11■□□□□ 0.81
VPS37A-204ENST00000519381 ZNF646O15015 1829 aaPredicted RBP20.11■□□□□ 0.81
VPS37A-204ENST00000519381 COL1A1P02452 1464 aaPredicted RBP20.11■□□□□ 0.81
VPS37A-204ENST00000519381 GRM8O00222 908 aa20.1■□□□□ 0.81
VPS37A-204ENST00000519381 BEND3Q5T5X7 828 aa20.1■□□□□ 0.81
VPS37A-204ENST00000519381 LMBR1LQ6UX01 489 aa20.1■□□□□ 0.81
VPS37A-204ENST00000519381 CTU1Q7Z7A3 348 aaKnown RBP20.1■□□□□ 0.81
VPS37A-204ENST00000519381 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
VPS37A-204ENST00000519381 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.1■□□□□ 0.81
VPS37A-204ENST00000519381 ZNF316A6NFI3 1004 aaPredicted RBP20.09■□□□□ 0.81
VPS37A-204ENST00000519381 F8W031 263 aaPredicted RBP20.09■□□□□ 0.81
VPS37A-204ENST00000519381 LDHAL6AQ6ZMR3 332 aa20.09■□□□□ 0.81
VPS37A-204ENST00000519381 ANGEL1Q9UNK9 670 aaKnown RBP20.09■□□□□ 0.81
VPS37A-204ENST00000519381 RGS19P49795 217 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms