RNA–Protein interactions for RNA: ENST00000519222.5

CSGALNACT1-207, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-207ENST00000519222 KRT32Q14532 448 aa21.39■■□□□ 1.02
CSGALNACT1-207ENST00000519222 ERFEQ4G0M1 354 aa21.39■■□□□ 1.02
CSGALNACT1-207ENST00000519222 C3orf67Q6ZVT6 689 aa21.39■■□□□ 1.02
CSGALNACT1-207ENST00000519222 GPT2Q8TD30 523 aa21.39■■□□□ 1.02
CSGALNACT1-207ENST00000519222 IDH1O75874 414 aaKnown RBP21.39■■□□□ 1.01
CSGALNACT1-207ENST00000519222 PUM3Q15397 648 aaKnown RBP21.39■■□□□ 1.01
CSGALNACT1-207ENST00000519222 CCDC152Q4G0S7 254 aa21.39■■□□□ 1.01
CSGALNACT1-207ENST00000519222 Q6ZUG5 572 aa21.39■■□□□ 1.01
CSGALNACT1-207ENST00000519222 CHST3Q7LGC8 479 aa21.39■■□□□ 1.01
CSGALNACT1-207ENST00000519222 CCDC24Q8N4L8 307 aa21.39■■□□□ 1.01
CSGALNACT1-207ENST00000519222 DSCC1Q9BVC3 393 aa21.39■■□□□ 1.01
CSGALNACT1-207ENST00000519222 SRP68Q9UHB9 627 aaKnown RBP21.39■■□□□ 1.01
CSGALNACT1-207ENST00000519222 ZNF652Q9Y2D9 606 aa21.39■■□□□ 1.01
CSGALNACT1-207ENST00000519222 FSD2A1L4K1 749 aa21.38■■□□□ 1.01
CSGALNACT1-207ENST00000519222 XRCC6P12956 609 aaKnown RBP eCLIP21.38■■□□□ 1.01
CSGALNACT1-207ENST00000519222 HAND2P61296 217 aa21.38■■□□□ 1.01
CSGALNACT1-207ENST00000519222 WTIPA6NIX2 430 aaPredicted RBP21.38■■□□□ 1.01
CSGALNACT1-207ENST00000519222 AMIGO3Q86WK7 504 aa21.38■■□□□ 1.01
CSGALNACT1-207ENST00000519222 LPIN2Q92539 896 aa21.38■■□□□ 1.01
CSGALNACT1-207ENST00000519222 AK7Q96M32 723 aa21.38■■□□□ 1.01
CSGALNACT1-207ENST00000519222 PIH1D3Q9NQM4 214 aaKnown RBP21.38■■□□□ 1.01
CSGALNACT1-207ENST00000519222 RBM27Q9P2N5 1060 aaKnown RBP21.38■■□□□ 1.01
CSGALNACT1-207ENST00000519222 FGD1P98174 961 aa21.37■■□□□ 1.01
CSGALNACT1-207ENST00000519222 SLC9C2Q5TAH2 1124 aa21.37■■□□□ 1.01
CSGALNACT1-207ENST00000519222 TBC1D9BQ66K14 1250 aa21.37■■□□□ 1.01
CSGALNACT1-207ENST00000519222 MROH5Q6ZUA9 1318 aa21.37■■□□□ 1.01
CSGALNACT1-207ENST00000519222 FOXP2O15409 715 aa21.37■■□□□ 1.01
CSGALNACT1-207ENST00000519222 ANKRD1Q15327 319 aa21.37■■□□□ 1.01
CSGALNACT1-207ENST00000519222 PANK2Q9BZ23 570 aa21.37■■□□□ 1.01
CSGALNACT1-207ENST00000519222 GNPATO15228 680 aa21.36■■□□□ 1.01
CSGALNACT1-207ENST00000519222 ZSCAN22P10073 491 aaPredicted RBP21.36■■□□□ 1.01
CSGALNACT1-207ENST00000519222 FGFR2P21802 821 aa21.36■■□□□ 1.01
CSGALNACT1-207ENST00000519222 GTF2E1P29083 439 aaPredicted RBP21.36■■□□□ 1.01
CSGALNACT1-207ENST00000519222 HSPA1LP34931 641 aa21.36■■□□□ 1.01
CSGALNACT1-207ENST00000519222 BRF1Q92994 677 aa21.36■■□□□ 1.01
CSGALNACT1-207ENST00000519222 E7EWF7 191 aa21.36■■□□□ 1.01
CSGALNACT1-207ENST00000519222 HSP90B1P14625 803 aaKnown RBP21.36■■□□□ 1.01
CSGALNACT1-207ENST00000519222 IGHMBP2P38935 993 aaKnown RBP21.36■■□□□ 1.01
CSGALNACT1-207ENST00000519222 ANKRD36CQ5JPF3 1778 aa21.35■■□□□ 1.01
CSGALNACT1-207ENST00000519222 VPS37CA5D8V6 355 aaPredicted RBP21.35■■□□□ 1.01
CSGALNACT1-207ENST00000519222 GJD4Q96KN9 370 aaPredicted RBP21.35■■□□□ 1.01
CSGALNACT1-207ENST00000519222 BCL2L12Q9HB09 334 aa21.35■■□□□ 1.01
CSGALNACT1-207ENST00000519222 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
CSGALNACT1-207ENST00000519222 SPATA31A6Q5VVP1 1343 aa21.35■■□□□ 1.01
CSGALNACT1-207ENST00000519222 FGAP02671 866 aa21.34■■□□□ 1.01
CSGALNACT1-207ENST00000519222 BCAMP50895 628 aa21.34■■□□□ 1.01
CSGALNACT1-207ENST00000519222 LRRFIP1Q32MZ4 808 aaKnown RBP21.34■■□□□ 1.01
CSGALNACT1-207ENST00000519222 CLEC4GQ6UXB4 293 aa21.34■■□□□ 1.01
CSGALNACT1-207ENST00000519222 APPBP2Q92624 585 aa21.34■■□□□ 1.01
CSGALNACT1-207ENST00000519222 GPAA1O43292 621 aa21.34■■□□□ 1.01
CSGALNACT1-207ENST00000519222 ZFYP08048 801 aaPredicted RBP21.34■■□□□ 1.01
CSGALNACT1-207ENST00000519222 L1TD1Q5T7N2 865 aaKnown RBP21.34■■□□□ 1.01
CSGALNACT1-207ENST00000519222 WWC3Q9ULE0 1092 aa21.33■■□□□ 1.01
CSGALNACT1-207ENST00000519222 IQSEC3Q9UPP2 1182 aaPredicted RBP21.33■■□□□ 1.01
CSGALNACT1-207ENST00000519222 PPFIA3O75145 1194 aa21.33■■□□□ 1
CSGALNACT1-207ENST00000519222 GADD45BO75293 160 aaPredicted RBP21.33■■□□□ 1
CSGALNACT1-207ENST00000519222 SLC5A1P13866 664 aa21.33■■□□□ 1
CSGALNACT1-207ENST00000519222 CHRNDQ07001 517 aa21.33■■□□□ 1
CSGALNACT1-207ENST00000519222 RASGRF1Q13972 1273 aa21.33■■□□□ 1
CSGALNACT1-207ENST00000519222 CNPY2Q9Y2B0 182 aa21.33■■□□□ 1
CSGALNACT1-207ENST00000519222 AFF2P51816 1311 aa21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 PHF14O94880 888 aa21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 LARP1BQ659C4 914 aaKnown RBP21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 USP48Q86UV5 1035 aa21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 ALDH8A1Q9H2A2 487 aaPredicted RBP21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 MTMR6Q9Y217 621 aa21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 F13A1P00488 732 aa21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 ARID4AP29374 1257 aaPredicted RBP21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 ADD2P35612 726 aa21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 DHX32Q7L7V1 743 aaKnown RBP21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 SPATA5Q8NB90 893 aa21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 NAP1L2Q9ULW6 460 aaPredicted RBP21.32■■□□□ 1
CSGALNACT1-207ENST00000519222 ZNF532Q9HCE3 1301 aa21.31■■□□□ 1
CSGALNACT1-207ENST00000519222 JAK2O60674 1132 aa21.31■■□□□ 1
CSGALNACT1-207ENST00000519222 APOBRQ0VD83 1088 aa21.31■■□□□ 1
CSGALNACT1-207ENST00000519222 FERMT3Q86UX7 667 aa21.31■■□□□ 1
CSGALNACT1-207ENST00000519222 ZNF512BQ96KM6 892 aaPredicted RBP21.31■■□□□ 1
CSGALNACT1-207ENST00000519222 GRPEL1Q9HAV7 217 aa21.31■■□□□ 1
CSGALNACT1-207ENST00000519222 ZSCAN23Q3MJ62 389 aa21.31■■□□□ 1
CSGALNACT1-207ENST00000519222 CERKQ8TCT0 537 aa21.31■■□□□ 1
CSGALNACT1-207ENST00000519222 CNTNAP4Q9C0A0 1308 aa21.3■■□□□ 1
CSGALNACT1-207ENST00000519222 TICAM2Q86XR7 235 aa21.3■■□□□ 1
CSGALNACT1-207ENST00000519222 GPHNQ9NQX3 736 aaPredicted RBP21.3■■□□□ 1
CSGALNACT1-207ENST00000519222 ZPR1O75312 459 aa21.3■■□□□ 1
CSGALNACT1-207ENST00000519222 RPS6KA4O75676 772 aa21.3■■□□□ 1
CSGALNACT1-207ENST00000519222 APPP05067 770 aa21.3■■□□□ 1
CSGALNACT1-207ENST00000519222 TTF1Q15361 905 aaPredicted RBP21.3■■□□□ 1
CSGALNACT1-207ENST00000519222 DDX11Q96FC9 970 aa21.3■■□□□ 1
CSGALNACT1-207ENST00000519222 TMEM63CQ9P1W3 806 aa21.3■■□□□ 1
CSGALNACT1-207ENST00000519222 UQCRFS1P1P0C7P4 283 aa21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 ARHGEF1Q92888 912 aaKnown RBP21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 ABCC12Q96J65 1359 aa21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 COL4A1P02462 1669 aa21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 PDE6AP16499 860 aa21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 CCT2P78371 535 aaKnown RBP21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 EXOSC10Q01780 885 aaKnown RBP21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 FAM173BQ6P4H8 233 aa21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 CDC37L1Q7L3B6 337 aa21.29■■□□□ 1
CSGALNACT1-207ENST00000519222 SEPT12Q8IYM1 358 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms