RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 RGS9O75916 674 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-207ENST00000518569 POLR3DP05423 398 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-207ENST00000518569 ZNF326Q5BKZ1 582 aaKnown RBP6.4□□□□□ -1.38
VPS13B-207ENST00000518569 PSAPL1Q6NUJ1 521 aa6.4□□□□□ -1.38
VPS13B-207ENST00000518569 MICALL1Q8N3F8 863 aa6.4□□□□□ -1.38
VPS13B-207ENST00000518569 TMEM102Q8N9M5 508 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-207ENST00000518569 NPHS2Q9NP85 383 aa6.4□□□□□ -1.38
VPS13B-207ENST00000518569 NLRP2Q9NX02 1062 aa6.4□□□□□ -1.38
VPS13B-207ENST00000518569 WWC3Q9ULE0 1092 aa6.4□□□□□ -1.38
VPS13B-207ENST00000518569 SMNDC1O75940 238 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS13B-207ENST00000518569 OSMRQ99650 979 aa6.39□□□□□ -1.39
VPS13B-207ENST00000518569 ZKSCAN3Q9BRR0 538 aa6.39□□□□□ -1.39
VPS13B-207ENST00000518569 BHLHE41Q9C0J9 482 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-207ENST00000518569 SMG9Q9H0W8 520 aaKnown RBP6.39□□□□□ -1.39
VPS13B-207ENST00000518569 RASSF4Q9H2L5 321 aa6.39□□□□□ -1.39
VPS13B-207ENST00000518569 SUV39H2Q9H5I1 410 aa6.39□□□□□ -1.39
VPS13B-207ENST00000518569 LILRB5O75023 590 aa6.38□□□□□ -1.39
VPS13B-207ENST00000518569 ALBP02768 609 aa6.38□□□□□ -1.39
VPS13B-207ENST00000518569 ITGAEP38570 1179 aa6.38□□□□□ -1.39
VPS13B-207ENST00000518569 ATP11AP98196 1134 aa6.38□□□□□ -1.39
VPS13B-207ENST00000518569 EPS8L3Q8TE67 593 aaKnown RBP6.38□□□□□ -1.39
VPS13B-207ENST00000518569 GIPC2Q8TF65 315 aa6.38□□□□□ -1.39
VPS13B-207ENST00000518569 NXPE3Q969Y0 559 aa6.38□□□□□ -1.39
VPS13B-207ENST00000518569 SRCIN1Q9C0H9 1055 aa6.38□□□□□ -1.39
VPS13B-207ENST00000518569 LATS2Q9NRM7 1088 aa6.38□□□□□ -1.39
VPS13B-207ENST00000518569 TRAK1Q9UPV9 953 aa6.38□□□□□ -1.39
VPS13B-207ENST00000518569 SPG7Q9UQ90 795 aa6.38□□□□□ -1.39
VPS13B-207ENST00000518569 M0R082 166 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 PDE2AO00408 941 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-207ENST00000518569 GADD45BO75293 160 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-207ENST00000518569 ACPPP15309 386 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 ZNF16P17020 682 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-207ENST00000518569 HOXB4P17483 251 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-207ENST00000518569 GNA15P30679 374 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 DGKGP49619 791 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 GRIK5Q16478 980 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS13B-207ENST00000518569 CEP135Q66GS9 1140 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 PRPF40BQ6NWY9 871 aaKnown RBP6.37□□□□□ -1.39
VPS13B-207ENST00000518569 CCNJLQ8IV13 435 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 ZNF417Q8TAU3 575 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 ZNF587Q96SQ5 575 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-207ENST00000518569 SETDB2Q96T68 719 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 DUSP9Q99956 384 aaKnown RBP6.37□□□□□ -1.39
VPS13B-207ENST00000518569 ADAM19Q9H013 955 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 BCL11AQ9H165 835 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 EHD4Q9H223 541 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 LIN7BQ9HAP6 207 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 JPH1Q9HDC5 661 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-207ENST00000518569 PPP4R2Q9NY27 417 aa6.37□□□□□ -1.39
VPS13B-207ENST00000518569 PIK3R2O00459 728 aa6.36□□□□□ -1.39
VPS13B-207ENST00000518569 ADAM23O75077 832 aa6.36□□□□□ -1.39
VPS13B-207ENST00000518569 PROCP04070 461 aa6.36□□□□□ -1.39
VPS13B-207ENST00000518569 ITGB2P05107 769 aa6.36□□□□□ -1.39
VPS13B-207ENST00000518569 AFF1P51825 1210 aaKnown RBP6.36□□□□□ -1.39
VPS13B-207ENST00000518569 DAB2P98082 770 aa6.36□□□□□ -1.39
VPS13B-207ENST00000518569 GRM2Q14416 872 aa6.36□□□□□ -1.39
VPS13B-207ENST00000518569 NUDT8Q8WV74 236 aa6.36□□□□□ -1.39
VPS13B-207ENST00000518569 TCF12Q99081 682 aa6.36□□□□□ -1.39
VPS13B-207ENST00000518569 POP1Q99575 1024 aaKnown RBP6.36□□□□□ -1.39
VPS13B-207ENST00000518569 PARP2Q9UGN5 583 aa6.36□□□□□ -1.39
VPS13B-207ENST00000518569 KRBA1A5PL33 1030 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 NID1P14543 1247 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 PTPRAP18433 802 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 XPCQ01831 940 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-207ENST00000518569 TAGLNQ01995 201 aaKnown RBP6.35□□□□□ -1.39
VPS13B-207ENST00000518569 PTPN12Q05209 780 aaKnown RBP6.35□□□□□ -1.39
VPS13B-207ENST00000518569 COL9A3Q14050 684 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-207ENST00000518569 PI16Q6UXB8 463 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 ILDR2Q71H61 639 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 TMC4Q7Z404 712 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 ALYREFQ86V81 257 aaKnown RBP6.35□□□□□ -1.39
VPS13B-207ENST00000518569 GLIS3Q8NEA6 775 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 FOXD4L4Q8WXT5 416 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-207ENST00000518569 BCO2Q9BYV7 579 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 MUC3BQ9H195 1237 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 ZFYVE1Q9HBF4 777 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 TRIM33Q9UPN9 1127 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 AK5Q9Y6K8 562 aa6.35□□□□□ -1.39
VPS13B-207ENST00000518569 K7ELQ4 463 aaPredicted RBP6.34□□□□□ -1.39
VPS13B-207ENST00000518569 GNB5O14775 395 aa6.34□□□□□ -1.39
VPS13B-207ENST00000518569 TRPA1O75762 1119 aa6.34□□□□□ -1.39
VPS13B-207ENST00000518569 XRCC5P13010 732 aaKnown RBP6.34□□□□□ -1.39
VPS13B-207ENST00000518569 ITPKAP23677 461 aa6.34□□□□□ -1.39
VPS13B-207ENST00000518569 COL8A1P27658 744 aa6.34□□□□□ -1.39
VPS13B-207ENST00000518569 BAG6P46379 1132 aa6.34□□□□□ -1.39
VPS13B-207ENST00000518569 MSL1Q68DK7 614 aa6.34□□□□□ -1.39
VPS13B-207ENST00000518569 LINC00114Q6XXX2 140 aa6.34□□□□□ -1.39
VPS13B-207ENST00000518569 BSNDQ8WZ55 320 aa6.34□□□□□ -1.39
VPS13B-207ENST00000518569 HHIPQ96QV1 700 aa6.34□□□□□ -1.39
VPS13B-207ENST00000518569 C12orf49Q9H741 205 aa6.34□□□□□ -1.39
VPS13B-207ENST00000518569 TMEM238LA0A1B0GVL6 79 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 FAM177BA6PVY3 158 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 EIF4BP23588 611 aaKnown RBP6.33□□□□□ -1.4
VPS13B-207ENST00000518569 CDC27P30260 824 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 PSMD2Q13200 908 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 NXPE4Q6UWF7 544 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 C8orf86Q6ZUL3 223 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 WFDC8Q8IUA0 241 aa6.33□□□□□ -1.4
VPS13B-207ENST00000518569 ANKRD24Q8TF21 1146 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms