RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 RPS6KA4O75676 772 aa7.99□□□□□ -1.13
MRPS28-203ENST00000518371 STARD3NLO95772 234 aa7.99□□□□□ -1.13
MRPS28-203ENST00000518371 SSFA2P28290 1259 aa7.99□□□□□ -1.13
MRPS28-203ENST00000518371 CRKLP46109 303 aaKnown RBP7.99□□□□□ -1.13
MRPS28-203ENST00000518371 QPCTQ16769 361 aa7.99□□□□□ -1.13
MRPS28-203ENST00000518371 ZNF496Q96IT1 587 aaPredicted RBP7.99□□□□□ -1.13
MRPS28-203ENST00000518371 FMNL2Q96PY5 1086 aa7.99□□□□□ -1.13
MRPS28-203ENST00000518371 THUMPD2Q9BTF0 503 aaKnown RBP7.99□□□□□ -1.13
MRPS28-203ENST00000518371 TEX13AQ9BXU3 409 aaPredicted RBP7.99□□□□□ -1.13
MRPS28-203ENST00000518371 ZBTB3Q9H5J0 574 aa7.99□□□□□ -1.13
MRPS28-203ENST00000518371 MIS18AQ9NYP9 233 aa7.99□□□□□ -1.13
MRPS28-203ENST00000518371 TOGARAM1Q9Y4F4 1720 aa7.99□□□□□ -1.13
MRPS28-203ENST00000518371 ITGB4P16144 1822 aa7.99□□□□□ -1.13
MRPS28-203ENST00000518371 RFC4P35249 363 aa7.98□□□□□ -1.13
MRPS28-203ENST00000518371 MSL1Q68DK7 614 aa7.98□□□□□ -1.13
MRPS28-203ENST00000518371 NPM2Q86SE8 214 aaKnown RBP7.98□□□□□ -1.13
MRPS28-203ENST00000518371 ARXQ96QS3 562 aa7.98□□□□□ -1.13
MRPS28-203ENST00000518371 CCDC87Q9NVE4 849 aa7.98□□□□□ -1.13
MRPS28-203ENST00000518371 CNTNAP4Q9C0A0 1308 aa7.98□□□□□ -1.13
MRPS28-203ENST00000518371 SOBPA7XYQ1 873 aa7.97□□□□□ -1.13
MRPS28-203ENST00000518371 APAF1O14727 1248 aa7.97□□□□□ -1.13
MRPS28-203ENST00000518371 LILRB3O75022 631 aa7.97□□□□□ -1.13
MRPS28-203ENST00000518371 SNRPA1P09661 255 aaKnown RBP7.97□□□□□ -1.13
MRPS28-203ENST00000518371 CYP19A1P11511 503 aaPredicted RBP7.97□□□□□ -1.13
MRPS28-203ENST00000518371 CANXP27824 592 aaKnown RBP7.97□□□□□ -1.13
MRPS28-203ENST00000518371 INTS5Q6P9B9 1019 aaKnown RBP7.97□□□□□ -1.13
MRPS28-203ENST00000518371 AMIGO3Q86WK7 504 aa7.97□□□□□ -1.13
MRPS28-203ENST00000518371 ZNF511Q8NB15 262 aa7.97□□□□□ -1.13
MRPS28-203ENST00000518371 MAP10Q9P2G4 905 aa7.97□□□□□ -1.13
MRPS28-203ENST00000518371 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
MRPS28-203ENST00000518371 TLL2Q9Y6L7 1015 aa7.97□□□□□ -1.13
MRPS28-203ENST00000518371 HEG1Q9ULI3 1381 aa7.97□□□□□ -1.13
MRPS28-203ENST00000518371 LY75O60449 1722 aa7.96□□□□□ -1.14
MRPS28-203ENST00000518371 F12P00748 615 aaPredicted RBP7.96□□□□□ -1.14
MRPS28-203ENST00000518371 IGHA1P01876 353 aa7.96□□□□□ -1.14
MRPS28-203ENST00000518371 CTHP32929 405 aa7.96□□□□□ -1.14
MRPS28-203ENST00000518371 SCARF1Q14162 830 aa7.96□□□□□ -1.14
MRPS28-203ENST00000518371 GPAT2Q6NUI2 795 aa7.96□□□□□ -1.14
MRPS28-203ENST00000518371 MRPL14Q6P1L8 145 aaKnown RBP7.96□□□□□ -1.14
MRPS28-203ENST00000518371 FAM9BQ8IZU0 186 aa7.96□□□□□ -1.14
MRPS28-203ENST00000518371 NLGN1Q8N2Q7 840 aa7.96□□□□□ -1.14
MRPS28-203ENST00000518371 TSPYL4Q9UJ04 414 aa7.96□□□□□ -1.14
MRPS28-203ENST00000518371 ZNF330Q9Y3S2 320 aaPredicted RBP7.96□□□□□ -1.14
MRPS28-203ENST00000518371 USP16Q9Y5T5 823 aa7.96□□□□□ -1.14
MRPS28-203ENST00000518371 PAPPAQ13219 1627 aa7.96□□□□□ -1.14
MRPS28-203ENST00000518371 MRC1P22897 1456 aa7.95□□□□□ -1.14
MRPS28-203ENST00000518371 SCN11AQ9UI33 1791 aa7.95□□□□□ -1.14
MRPS28-203ENST00000518371 SENP3-EIF4A1A0A087X0R7 540 aa7.95□□□□□ -1.14
MRPS28-203ENST00000518371 A1BGP04217 495 aa7.95□□□□□ -1.14
MRPS28-203ENST00000518371 RTL5Q5HYW3 569 aaPredicted RBP7.95□□□□□ -1.14
MRPS28-203ENST00000518371 PURBQ96QR8 312 aaKnown RBP7.95□□□□□ -1.14
MRPS28-203ENST00000518371 ZBTB1Q9Y2K1 713 aa7.95□□□□□ -1.14
MRPS28-203ENST00000518371 A0A087WZG4 1122 aa7.94□□□□□ -1.14
MRPS28-203ENST00000518371 PRAMEF22A3QJZ6 481 aa7.94□□□□□ -1.14
MRPS28-203ENST00000518371 EIF4A1P60842 406 aaKnown RBP7.94□□□□□ -1.14
MRPS28-203ENST00000518371 CALD1Q05682 793 aaKnown RBP7.94□□□□□ -1.14
MRPS28-203ENST00000518371 FHDC1Q9C0D6 1143 aaPredicted RBP7.94□□□□□ -1.14
MRPS28-203ENST00000518371 BABAM1Q9NWV8 329 aa7.94□□□□□ -1.14
MRPS28-203ENST00000518371 SRP68Q9UHB9 627 aaKnown RBP7.94□□□□□ -1.14
MRPS28-203ENST00000518371 C4BP0C0L5 1744 aa7.94□□□□□ -1.14
MRPS28-203ENST00000518371 CHL1O00533 1208 aa7.93□□□□□ -1.14
MRPS28-203ENST00000518371 GIGYF1O75420 1035 aaPredicted RBP7.93□□□□□ -1.14
MRPS28-203ENST00000518371 GYS1P13807 737 aa7.93□□□□□ -1.14
MRPS28-203ENST00000518371 IL6STP40189 918 aaPredicted RBP7.93□□□□□ -1.14
MRPS28-203ENST00000518371 EIF5P55010 431 aaKnown RBP7.93□□□□□ -1.14
MRPS28-203ENST00000518371 USPL1Q5W0Q7 1092 aa7.93□□□□□ -1.14
MRPS28-203ENST00000518371 FOXJ1Q92949 421 aa7.93□□□□□ -1.14
MRPS28-203ENST00000518371 SYT17Q9BSW7 474 aa7.93□□□□□ -1.14
MRPS28-203ENST00000518371 POLR3EQ9NVU0 708 aa7.93□□□□□ -1.14
MRPS28-203ENST00000518371 NARFQ9UHQ1 456 aa7.93□□□□□ -1.14
MRPS28-203ENST00000518371 PARP3Q9Y6F1 533 aa7.93□□□□□ -1.14
MRPS28-203ENST00000518371 DNMT3AQ9Y6K1 912 aaPredicted RBP7.93□□□□□ -1.14
MRPS28-203ENST00000518371 SOS1Q07889 1333 aaPredicted RBP7.93□□□□□ -1.14
MRPS28-203ENST00000518371 C5P01031 1676 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 ADAMTS7Q9UKP4 1686 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 PPFIA3O75145 1194 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 MMP10P09238 476 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 EIF2S2P20042 333 aaKnown RBP7.92□□□□□ -1.14
MRPS28-203ENST00000518371 PIP4K2AP48426 406 aaPredicted RBP7.92□□□□□ -1.14
MRPS28-203ENST00000518371 GNAI1P63096 354 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 DIEXFQ68CQ4 756 aaKnown RBP7.92□□□□□ -1.14
MRPS28-203ENST00000518371 MPNDQ8N594 471 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 NGEFQ8N5V2 710 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 TSC1Q92574 1164 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 GPBP1L1Q9HC44 474 aaPredicted RBP7.92□□□□□ -1.14
MRPS28-203ENST00000518371 TBC1D2BQ9UPU7 963 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 KCPQ6ZWJ8 1503 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 LRP5O75197 1615 aa7.92□□□□□ -1.14
MRPS28-203ENST00000518371 VARSP26640 1264 aaKnown RBP7.91□□□□□ -1.14
MRPS28-203ENST00000518371 CLK2P49760 499 aaKnown RBP7.91□□□□□ -1.14
MRPS28-203ENST00000518371 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
MRPS28-203ENST00000518371 DZIP3Q86Y13 1208 aaKnown RBP7.91□□□□□ -1.14
MRPS28-203ENST00000518371 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
MRPS28-203ENST00000518371 USP42Q9H9J4 1324 aaKnown RBP7.91□□□□□ -1.14
MRPS28-203ENST00000518371 COL15A1P39059 1388 aa7.91□□□□□ -1.14
MRPS28-203ENST00000518371 CASZ1Q86V15 1759 aa7.91□□□□□ -1.14
MRPS28-203ENST00000518371 TAF1LQ8IZX4 1826 aa7.9□□□□□ -1.14
MRPS28-203ENST00000518371 CCER2I3L3R5 266 aa7.9□□□□□ -1.14
MRPS28-203ENST00000518371 MYL6BP14649 208 aa7.9□□□□□ -1.14
MRPS28-203ENST00000518371 BICDL1Q6ZP65 573 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms