RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 ZKSCAN1P17029 563 aaPredicted RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 EXOSC10Q01780 885 aaKnown RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 TOB2Q14106 344 aaPredicted RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 ALX1Q15699 326 aa9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 ATP2B3Q16720 1220 aa9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 CCDC158Q5M9N0 1113 aa9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 ZGPATQ8N5A5 531 aaKnown RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 BCL11BQ9C0K0 894 aaPredicted RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 CYP46A1Q9Y6A2 500 aa9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 COL1A1P02452 1464 aaPredicted RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 COL11A2P13942 1736 aaPredicted RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 IFIT1P09914 478 aaKnown RBP9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 CCDC152Q4G0S7 254 aa9.61□□□□□ -0.87
ARFGEF1-204ENST00000518290 KLHL40Q2TBA0 621 aa9.6□□□□□ -0.87
ARFGEF1-204ENST00000518290 PRPF40BQ6NWY9 871 aaKnown RBP9.6□□□□□ -0.87
ARFGEF1-204ENST00000518290 APPBP2Q92624 585 aa9.6□□□□□ -0.87
ARFGEF1-204ENST00000518290 CDC5LQ99459 802 aaKnown RBP9.6□□□□□ -0.87
ARFGEF1-204ENST00000518290 TRPC5Q9UL62 973 aaPredicted RBP9.6□□□□□ -0.87
ARFGEF1-204ENST00000518290 MCAMP43121 646 aa9.6□□□□□ -0.87
ARFGEF1-204ENST00000518290 TIMM10P62072 90 aa9.6□□□□□ -0.87
ARFGEF1-204ENST00000518290 NYXQ9GZU5 481 aa9.6□□□□□ -0.87
ARFGEF1-204ENST00000518290 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.6□□□□□ -0.87
ARFGEF1-204ENST00000518290 SALL1Q9NSC2 1324 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 CASTP20810 708 aaKnown RBP9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 ADORA1P30542 326 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 ADD2P35612 726 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 PIP4K2BP78356 416 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 SLC27A3Q5K4L6 730 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 ZSCAN25Q6NSZ9 544 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 SYNE4Q8N205 404 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 NGLY1Q96IV0 654 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 C8orf37Q96NL8 207 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 PDRG1Q9NUG6 133 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 AFF2P51816 1311 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 PNPLA7Q6ZV29 1317 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 NUTM2BA6NNL0 878 aaPredicted RBP9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 NUTM2EB1AL46 878 aaPredicted RBP9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 C15orf52Q6ZUT6 534 aaKnown RBP9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 LMBRD1Q9NUN5 540 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 BSDC1Q9NW68 430 aaPredicted RBP9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 TBC1D2BQ9UPU7 963 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 CYP21A2P08686 494 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 HSPD1P10809 573 aaKnown RBP9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 LDHAL6AQ6ZMR3 332 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 EDC3Q96F86 508 aaKnown RBP9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 ACSBG1Q96GR2 724 aa9.59□□□□□ -0.87
ARFGEF1-204ENST00000518290 PSME4Q14997 1843 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 KIF13BQ9NQT8 1826 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 WDR33Q9C0J8 1336 aaKnown RBP9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 TCHHQ07283 1943 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 NAV1Q8NEY1 1877 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 M0R2C6 588 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 SEMA3EO15041 775 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 TRAK2O60296 914 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 SCARF1Q14162 830 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 SMARCC2Q8TAQ2 1214 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 LLPHQ9BRT6 129 aaKnown RBP9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 MTA3Q9BTC8 594 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 GPTP24298 496 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 TTC39AQ5SRH9 613 aa9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 JAKMIP1Q96N16 626 aaKnown RBP9.58□□□□□ -0.88
ARFGEF1-204ENST00000518290 GOLIM4O00461 696 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 METTL24Q5JXM2 366 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 CCDC102BQ68D86 513 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 STOX1Q6ZVD7 989 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 DDX46Q7L014 1031 aaKnown RBP9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 OSBP2Q969R2 916 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 KLRG2A4D1S0 409 aaPredicted RBP9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 LARGE1O95461 756 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 PKP1Q13835 747 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 UBE4AQ14139 1066 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 TPCN1Q9ULQ1 816 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 NIP7Q9Y221 180 aaKnown RBP eCLIP9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 SLC5A1P13866 664 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 TM4SF1P30408 202 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 ZNF445P59923 1031 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 ME3Q16798 604 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 BLOC1S2Q6QNY1 142 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 SYTL4Q96C24 671 aaPredicted RBP9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 UPF3BQ9BZI7 483 aaKnown RBP9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 ZMYND15Q9H091 742 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 TAF6LQ9Y6J9 622 aa9.57□□□□□ -0.88
ARFGEF1-204ENST00000518290 HSPA1LP34931 641 aa9.56□□□□□ -0.88
ARFGEF1-204ENST00000518290 ZAP70P43403 619 aa9.56□□□□□ -0.88
ARFGEF1-204ENST00000518290 NT5C2P49902 561 aa9.56□□□□□ -0.88
ARFGEF1-204ENST00000518290 GTF3C6Q969F1 213 aa9.56□□□□□ -0.88
ARFGEF1-204ENST00000518290 DNAJC2Q99543 621 aaKnown RBP9.56□□□□□ -0.88
ARFGEF1-204ENST00000518290 CTNNA3Q9UI47 895 aa9.56□□□□□ -0.88
ARFGEF1-204ENST00000518290 CHMP3Q9Y3E7 222 aa9.56□□□□□ -0.88
ARFGEF1-204ENST00000518290 PFKFB2O60825 505 aa9.56□□□□□ -0.88
ARFGEF1-204ENST00000518290 ZNF274Q96GC6 653 aaPredicted RBP9.56□□□□□ -0.88
ARFGEF1-204ENST00000518290 NEK1Q96PY6 1258 aa9.56□□□□□ -0.88
ARFGEF1-204ENST00000518290 CRY2Q49AN0 593 aa9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 TBC1D9BQ66K14 1250 aa9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 DHX32Q7L7V1 743 aaKnown RBP9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 MB21D2Q8IYB1 491 aaPredicted RBP9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 CHMP4CQ96CF2 233 aa9.55□□□□□ -0.88
ARFGEF1-204ENST00000518290 ZSCAN22P10073 491 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms