RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 MCMDC2Q4G0Z9 681 aa28.12■■■□□ 2.09
SLIT3-204ENST00000518140 RPS8P62241 208 aaKnown RBP28.11■■■□□ 2.09
SLIT3-204ENST00000518140 FOXD4L1Q9NU39 408 aa28.11■■■□□ 2.09
SLIT3-204ENST00000518140 RNF113AO15541 343 aaKnown RBP28.11■■■□□ 2.09
SLIT3-204ENST00000518140 CYP2E1P05181 493 aaPredicted RBP28.1■■■□□ 2.09
SLIT3-204ENST00000518140 ARID4AP29374 1257 aaPredicted RBP28.1■■■□□ 2.09
SLIT3-204ENST00000518140 BCAMP50895 628 aa28.1■■■□□ 2.09
SLIT3-204ENST00000518140 ZMYM1Q5SVZ6 1142 aa28.1■■■□□ 2.09
SLIT3-204ENST00000518140 ST18O60284 1047 aa28.09■■■□□ 2.09
SLIT3-204ENST00000518140 SERPINB2P05120 415 aa28.09■■■□□ 2.09
SLIT3-204ENST00000518140 DDR1Q08345 913 aa28.09■■■□□ 2.09
SLIT3-204ENST00000518140 COL23A1Q86Y22 540 aaPredicted RBP28.09■■■□□ 2.09
SLIT3-204ENST00000518140 SLC51AQ86UW1 340 aa28.09■■■□□ 2.09
SLIT3-204ENST00000518140 AKAP11Q9UKA4 1901 aa28.09■■■□□ 2.09
SLIT3-204ENST00000518140 TNRC6CQ9HCJ0 1690 aaKnown RBP28.08■■■□□ 2.09
SLIT3-204ENST00000518140 KCNB2Q92953 911 aa28.08■■■□□ 2.09
SLIT3-204ENST00000518140 HMG20BQ9P0W2 317 aa28.08■■■□□ 2.09
SLIT3-204ENST00000518140 KCNJ4P48050 445 aa28.07■■■□□ 2.08
SLIT3-204ENST00000518140 CREB3L3Q68CJ9 461 aa28.07■■■□□ 2.08
SLIT3-204ENST00000518140 PIH1D3Q9NQM4 214 aaKnown RBP28.07■■■□□ 2.08
SLIT3-204ENST00000518140 TAF6LQ9Y6J9 622 aa28.07■■■□□ 2.08
SLIT3-204ENST00000518140 ADCK5Q3MIX3 580 aa28.07■■■□□ 2.08
SLIT3-204ENST00000518140 OSBP2Q969R2 916 aa28.07■■■□□ 2.08
SLIT3-204ENST00000518140 HELLSQ9NRZ9 838 aa28.07■■■□□ 2.08
SLIT3-204ENST00000518140 UQCRFS1P1P0C7P4 283 aa28.06■■■□□ 2.08
SLIT3-204ENST00000518140 CPA1P15085 419 aa28.06■■■□□ 2.08
SLIT3-204ENST00000518140 RASGRF1Q13972 1273 aa28.06■■■□□ 2.08
SLIT3-204ENST00000518140 M0R2C6 588 aa28.05■■■□□ 2.08
SLIT3-204ENST00000518140 SLC27A2O14975 620 aa28.05■■■□□ 2.08
SLIT3-204ENST00000518140 VPS53Q5VIR6 699 aa28.05■■■□□ 2.08
SLIT3-204ENST00000518140 MAST3O60307 1309 aa28.04■■■□□ 2.08
SLIT3-204ENST00000518140 POLRMTO00411 1230 aaKnown RBP28.04■■■□□ 2.08
SLIT3-204ENST00000518140 TICAM2Q86XR7 235 aa28.04■■■□□ 2.08
SLIT3-204ENST00000518140 DDIT3P35638 169 aa28.04■■■□□ 2.08
SLIT3-204ENST00000518140 COL9A3Q14050 684 aaPredicted RBP28.04■■■□□ 2.08
SLIT3-204ENST00000518140 SPATA5Q8NB90 893 aa28.04■■■□□ 2.08
SLIT3-204ENST00000518140 ARAP2Q8WZ64 1704 aa28.03■■■□□ 2.08
SLIT3-204ENST00000518140 GYG1P46976 350 aa28.03■■■□□ 2.08
SLIT3-204ENST00000518140 NOL8Q76FK4 1167 aaKnown RBP28.03■■■□□ 2.08
SLIT3-204ENST00000518140 IQSEC3Q9UPP2 1182 aaPredicted RBP28.02■■■□□ 2.08
SLIT3-204ENST00000518140 HSP90AA1P07900 732 aaKnown RBP28.01■■■□□ 2.07
SLIT3-204ENST00000518140 UBE4AQ14139 1066 aa28.01■■■□□ 2.07
SLIT3-204ENST00000518140 WASHC4Q2M389 1173 aa28.01■■■□□ 2.07
SLIT3-204ENST00000518140 TNS1Q9HBL0 1735 aaKnown RBP28.01■■■□□ 2.07
SLIT3-204ENST00000518140 CASTP20810 708 aaKnown RBP28.01■■■□□ 2.07
SLIT3-204ENST00000518140 HMGB2P26583 209 aaKnown RBP28.01■■■□□ 2.07
SLIT3-204ENST00000518140 KLRK1P26718 216 aa28.01■■■□□ 2.07
SLIT3-204ENST00000518140 JAKMIP1Q96N16 626 aaKnown RBP28.01■■■□□ 2.07
SLIT3-204ENST00000518140 PUS7LQ9H0K6 701 aaKnown RBP28.01■■■□□ 2.07
SLIT3-204ENST00000518140 IDH1O75874 414 aaKnown RBP28■■■□□ 2.07
SLIT3-204ENST00000518140 ZFYP08048 801 aaPredicted RBP27.99■■■□□ 2.07
SLIT3-204ENST00000518140 ST5P78524 1137 aa27.99■■■□□ 2.07
SLIT3-204ENST00000518140 EN1Q05925 392 aaPredicted RBP27.99■■■□□ 2.07
SLIT3-204ENST00000518140 GSE1Q14687 1217 aa27.99■■■□□ 2.07
SLIT3-204ENST00000518140 EZH2Q15910 746 aaKnown RBP27.99■■■□□ 2.07
SLIT3-204ENST00000518140 TTC14Q96N46 770 aa27.99■■■□□ 2.07
SLIT3-204ENST00000518140 ZKSCAN1P17029 563 aaPredicted RBP27.99■■■□□ 2.07
SLIT3-204ENST00000518140 TTF1Q15361 905 aaPredicted RBP27.99■■■□□ 2.07
SLIT3-204ENST00000518140 SLC9C2Q5TAH2 1124 aa27.99■■■□□ 2.07
SLIT3-204ENST00000518140 TMX3Q96JJ7 454 aa27.99■■■□□ 2.07
SLIT3-204ENST00000518140 WWC3Q9ULE0 1092 aa27.99■■■□□ 2.07
SLIT3-204ENST00000518140 PNPLA7Q6ZV29 1317 aa27.98■■■□□ 2.07
SLIT3-204ENST00000518140 GRAPQ13588 217 aa27.98■■■□□ 2.07
SLIT3-204ENST00000518140 GRAPLQ8TC17 118 aaPredicted RBP27.98■■■□□ 2.07
SLIT3-204ENST00000518140 HSPD1P10809 573 aaKnown RBP27.98■■■□□ 2.07
SLIT3-204ENST00000518140 ADD2P35612 726 aa27.98■■■□□ 2.07
SLIT3-204ENST00000518140 LRRFIP1Q32MZ4 808 aaKnown RBP27.98■■■□□ 2.07
SLIT3-204ENST00000518140 CRY2Q49AN0 593 aa27.98■■■□□ 2.07
SLIT3-204ENST00000518140 APPBP2Q92624 585 aa27.98■■■□□ 2.07
SLIT3-204ENST00000518140 FAM84BQ96KN1 310 aaPredicted RBP27.98■■■□□ 2.07
SLIT3-204ENST00000518140 LARP6Q9BRS8 491 aaKnown RBP27.98■■■□□ 2.07
SLIT3-204ENST00000518140 ZSWIM6Q9HCJ5 1215 aa27.98■■■□□ 2.07
SLIT3-204ENST00000518140 A0A1B0GUL6 1792 aa27.97■■■□□ 2.07
SLIT3-204ENST00000518140 CHMP5Q9NZZ3 219 aa27.97■■■□□ 2.07
SLIT3-204ENST00000518140 MYO5AQ9Y4I1 1855 aaKnown RBP27.97■■■□□ 2.07
SLIT3-204ENST00000518140 A0A0G2JLW4 131 aa27.96■■■□□ 2.07
SLIT3-204ENST00000518140 CAMKK2Q96RR4 588 aa27.96■■■□□ 2.07
SLIT3-204ENST00000518140 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.96■■■□□ 2.07
SLIT3-204ENST00000518140 U3KPZ7 1027 aaPredicted RBP27.96■■■□□ 2.07
SLIT3-204ENST00000518140 ZNF804BA4D1E1 1349 aa27.96■■■□□ 2.07
SLIT3-204ENST00000518140 FOXP2O15409 715 aa27.96■■■□□ 2.07
SLIT3-204ENST00000518140 NLGN1Q8N2Q7 840 aa27.96■■■□□ 2.07
SLIT3-204ENST00000518140 RPGRQ92834 1020 aaKnown RBP27.96■■■□□ 2.07
SLIT3-204ENST00000518140 TM6SF1Q9BZW5 370 aa27.96■■■□□ 2.07
SLIT3-204ENST00000518140 ANO8Q9HCE9 1232 aaPredicted RBP27.96■■■□□ 2.07
SLIT3-204ENST00000518140 RNF20Q5VTR2 975 aa27.95■■■□□ 2.07
SLIT3-204ENST00000518140 ANKRD2Q9GZV1 360 aa27.95■■■□□ 2.07
SLIT3-204ENST00000518140 CYP21A2P08686 494 aa27.95■■■□□ 2.06
SLIT3-204ENST00000518140 PDE6AP16499 860 aa27.95■■■□□ 2.06
SLIT3-204ENST00000518140 AK2P54819 239 aa27.95■■■□□ 2.06
SLIT3-204ENST00000518140 ZGPATQ8N5A5 531 aaKnown RBP27.95■■■□□ 2.06
SLIT3-204ENST00000518140 DSCC1Q9BVC3 393 aa27.95■■■□□ 2.06
SLIT3-204ENST00000518140 MCM2P49736 904 aa27.94■■■□□ 2.06
SLIT3-204ENST00000518140 MSL1Q68DK7 614 aa27.94■■■□□ 2.06
SLIT3-204ENST00000518140 ZNF532Q9HCE3 1301 aa27.94■■■□□ 2.06
SLIT3-204ENST00000518140 TCRBV5S4A2TA0A5A2 114 aa27.93■■■□□ 2.06
SLIT3-204ENST00000518140 TSGA10IPQ3SY00 556 aa27.93■■■□□ 2.06
SLIT3-204ENST00000518140 TXNRD3Q86VQ6 643 aa27.93■■■□□ 2.06
SLIT3-204ENST00000518140 RPAP1Q9BWH6 1393 aaPredicted RBP27.93■■■□□ 2.06
SLIT3-204ENST00000518140 ZSCAN25Q6NSZ9 544 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms