RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 FOXD4L5Q5VV16 416 aaPredicted RBP31.66■■■□□ 2.66
COL13A1-210ENST00000517713 FOXD4L4Q8WXT5 416 aaPredicted RBP31.66■■■□□ 2.66
COL13A1-210ENST00000517713 ME3Q16798 604 aa31.66■■■□□ 2.66
COL13A1-210ENST00000517713 CCDC102BQ68D86 513 aa31.66■■■□□ 2.66
COL13A1-210ENST00000517713 CCNL1Q9UK58 526 aaPredicted RBP31.66■■■□□ 2.66
COL13A1-210ENST00000517713 TPCN1Q9ULQ1 816 aa31.66■■■□□ 2.66
COL13A1-210ENST00000517713 AKAP11Q9UKA4 1901 aa31.66■■■□□ 2.66
COL13A1-210ENST00000517713 CCDC83Q8IWF9 413 aa31.65■■■□□ 2.66
COL13A1-210ENST00000517713 SMC3Q9UQE7 1217 aa31.65■■■□□ 2.66
COL13A1-210ENST00000517713 SCN7AQ01118 1682 aa31.65■■■□□ 2.66
COL13A1-210ENST00000517713 ARAP2Q8WZ64 1704 aa31.65■■■□□ 2.66
COL13A1-210ENST00000517713 UQCRFS1P1P0C7P4 283 aa31.65■■■□□ 2.66
COL13A1-210ENST00000517713 SLC5A1P13866 664 aa31.65■■■□□ 2.66
COL13A1-210ENST00000517713 ARID4AP29374 1257 aaPredicted RBP31.65■■■□□ 2.66
COL13A1-210ENST00000517713 WASHC4Q2M389 1173 aa31.64■■■□□ 2.66
COL13A1-210ENST00000517713 ERFEQ4G0M1 354 aa31.64■■■□□ 2.66
COL13A1-210ENST00000517713 TCEANC2Q96MN5 208 aa31.64■■■□□ 2.66
COL13A1-210ENST00000517713 ONECUT3O60422 494 aaPredicted RBP31.63■■■□□ 2.65
COL13A1-210ENST00000517713 PHKA1P46020 1223 aa31.63■■■□□ 2.65
COL13A1-210ENST00000517713 TTF1Q15361 905 aaPredicted RBP31.63■■■□□ 2.65
COL13A1-210ENST00000517713 SMIM5Q71RC9 77 aa31.63■■■□□ 2.65
COL13A1-210ENST00000517713 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.63■■■□□ 2.65
COL13A1-210ENST00000517713 NARFQ9UHQ1 456 aa31.63■■■□□ 2.65
COL13A1-210ENST00000517713 WDR33Q9C0J8 1336 aaKnown RBP31.63■■■□□ 2.65
COL13A1-210ENST00000517713 APPBP2Q92624 585 aa31.63■■■□□ 2.65
COL13A1-210ENST00000517713 BCL2L12Q9HB09 334 aa31.63■■■□□ 2.65
COL13A1-210ENST00000517713 ATRNO75882 1429 aa31.62■■■□□ 2.65
COL13A1-210ENST00000517713 TOB2Q14106 344 aaPredicted RBP31.62■■■□□ 2.65
COL13A1-210ENST00000517713 TRPC5Q9UL62 973 aaPredicted RBP31.62■■■□□ 2.65
COL13A1-210ENST00000517713 GNPATO15228 680 aa31.61■■■□□ 2.65
COL13A1-210ENST00000517713 TBC1D9BQ66K14 1250 aa31.61■■■□□ 2.65
COL13A1-210ENST00000517713 LMBRD1Q9NUN5 540 aa31.61■■■□□ 2.65
COL13A1-210ENST00000517713 ZSCAN25Q6NSZ9 544 aa31.61■■■□□ 2.65
COL13A1-210ENST00000517713 BICDL1Q6ZP65 573 aa31.61■■■□□ 2.65
COL13A1-210ENST00000517713 MYH7P12883 1935 aa31.61■■■□□ 2.65
COL13A1-210ENST00000517713 ST3GAL1Q11201 340 aa31.6■■■□□ 2.65
COL13A1-210ENST00000517713 CDC5LQ99459 802 aaKnown RBP31.59■■■□□ 2.65
COL13A1-210ENST00000517713 NECAB1Q8N987 351 aa31.59■■■□□ 2.65
COL13A1-210ENST00000517713 RTCBQ9Y3I0 505 aaKnown RBP31.59■■■□□ 2.65
COL13A1-210ENST00000517713 DDX49Q9Y6V7 483 aaKnown RBP31.59■■■□□ 2.65
COL13A1-210ENST00000517713 SBF2Q86WG5 1849 aa31.59■■■□□ 2.65
COL13A1-210ENST00000517713 LY75O60449 1722 aa31.59■■■□□ 2.65
COL13A1-210ENST00000517713 HMGB1P09429 215 aaKnown RBP31.58■■■□□ 2.65
COL13A1-210ENST00000517713 SF3B3Q15393 1217 aaKnown RBP31.58■■■□□ 2.65
COL13A1-210ENST00000517713 STOX1Q6ZVD7 989 aa31.58■■■□□ 2.65
COL13A1-210ENST00000517713 SEPT12Q8IYM1 358 aa31.58■■■□□ 2.65
COL13A1-210ENST00000517713 ZPR1O75312 459 aa31.58■■■□□ 2.65
COL13A1-210ENST00000517713 GJB2P29033 226 aa31.58■■■□□ 2.65
COL13A1-210ENST00000517713 KLHL40Q2TBA0 621 aa31.58■■■□□ 2.65
COL13A1-210ENST00000517713 PUS7LQ9H0K6 701 aaKnown RBP31.58■■■□□ 2.65
COL13A1-210ENST00000517713 PIH1D3Q9NQM4 214 aaKnown RBP31.58■■■□□ 2.65
COL13A1-210ENST00000517713 SRP68Q9UHB9 627 aaKnown RBP31.58■■■□□ 2.65
COL13A1-210ENST00000517713 SNAP23O00161 211 aa31.56■■■□□ 2.64
COL13A1-210ENST00000517713 GTF2E1P29083 439 aaPredicted RBP31.56■■■□□ 2.64
COL13A1-210ENST00000517713 ADD2P35612 726 aa31.56■■■□□ 2.64
COL13A1-210ENST00000517713 CHAMP1Q96JM3 812 aa31.56■■■□□ 2.64
COL13A1-210ENST00000517713 PRPF40AO75400 957 aaKnown RBP31.56■■■□□ 2.64
COL13A1-210ENST00000517713 SYT1P21579 422 aa31.56■■■□□ 2.64
COL13A1-210ENST00000517713 CHRNDQ07001 517 aa31.56■■■□□ 2.64
COL13A1-210ENST00000517713 SLC10A5Q5PT55 438 aa31.56■■■□□ 2.64
COL13A1-210ENST00000517713 C3orf67Q6ZVT6 689 aa31.56■■■□□ 2.64
COL13A1-210ENST00000517713 SETDB2Q96T68 719 aa31.56■■■□□ 2.64
COL13A1-210ENST00000517713 NYXQ9GZU5 481 aa31.56■■■□□ 2.64
COL13A1-210ENST00000517713 CTNNA3Q9UI47 895 aa31.56■■■□□ 2.64
COL13A1-210ENST00000517713 STX6O43752 255 aa31.55■■■□□ 2.64
COL13A1-210ENST00000517713 SLC9C2Q5TAH2 1124 aa31.55■■■□□ 2.64
COL13A1-210ENST00000517713 Q6ZUG5 572 aa31.55■■■□□ 2.64
COL13A1-210ENST00000517713 TAF1LQ8IZX4 1826 aa31.55■■■□□ 2.64
COL13A1-210ENST00000517713 ANKRD18AQ8IVF6 992 aa31.54■■■□□ 2.64
COL13A1-210ENST00000517713 SPATA5Q8NB90 893 aa31.54■■■□□ 2.64
COL13A1-210ENST00000517713 LAMA4Q16363 1823 aa31.53■■■□□ 2.64
COL13A1-210ENST00000517713 A0A0G2JLW4 131 aa31.53■■■□□ 2.64
COL13A1-210ENST00000517713 E7EWF7 191 aa31.53■■■□□ 2.64
COL13A1-210ENST00000517713 FOXP2O15409 715 aa31.53■■■□□ 2.64
COL13A1-210ENST00000517713 IDH1O75874 414 aaKnown RBP31.53■■■□□ 2.64
COL13A1-210ENST00000517713 ZSCAN22P10073 491 aaPredicted RBP31.53■■■□□ 2.64
COL13A1-210ENST00000517713 DHX32Q7L7V1 743 aaKnown RBP31.53■■■□□ 2.64
COL13A1-210ENST00000517713 COL4A1P02462 1669 aa31.53■■■□□ 2.64
COL13A1-210ENST00000517713 UBE3CQ15386 1083 aa31.53■■■□□ 2.64
COL13A1-210ENST00000517713 ARHGEF1Q92888 912 aaKnown RBP31.53■■■□□ 2.64
COL13A1-210ENST00000517713 CASZ1Q86V15 1759 aa31.52■■■□□ 2.64
COL13A1-210ENST00000517713 GOLGA6L3A6NEY3 463 aa31.52■■■□□ 2.64
COL13A1-210ENST00000517713 GPAA1O43292 621 aa31.52■■■□□ 2.64
COL13A1-210ENST00000517713 TTLL5Q6EMB2 1281 aa31.52■■■□□ 2.64
COL13A1-210ENST00000517713 AEBP2Q6ZN18 517 aaPredicted RBP31.52■■■□□ 2.64
COL13A1-210ENST00000517713 L1TD1Q5T7N2 865 aaKnown RBP31.51■■■□□ 2.64
COL13A1-210ENST00000517713 FSD2A1L4K1 749 aa31.51■■■□□ 2.63
COL13A1-210ENST00000517713 RASGRF1Q13972 1273 aa31.51■■■□□ 2.63
COL13A1-210ENST00000517713 AMIGO3Q86WK7 504 aa31.51■■■□□ 2.63
COL13A1-210ENST00000517713 COL24A1Q17RW2 1714 aa31.51■■■□□ 2.63
COL13A1-210ENST00000517713 NBPF5PQ86XG9 351 aaPredicted RBP31.5■■■□□ 2.63
COL13A1-210ENST00000517713 MYO5AQ9Y4I1 1855 aaKnown RBP31.5■■■□□ 2.63
COL13A1-210ENST00000517713 FGAP02671 866 aa31.49■■■□□ 2.63
COL13A1-210ENST00000517713 PDE6AP16499 860 aa31.49■■■□□ 2.63
COL13A1-210ENST00000517713 IMMTQ16891 758 aaKnown RBP31.49■■■□□ 2.63
COL13A1-210ENST00000517713 BCL11BQ9C0K0 894 aaPredicted RBP31.49■■■□□ 2.63
COL13A1-210ENST00000517713 QTRT2Q9H974 415 aaKnown RBP31.49■■■□□ 2.63
COL13A1-210ENST00000517713 BSDC1Q9NW68 430 aaPredicted RBP31.49■■■□□ 2.63
COL13A1-210ENST00000517713 C4BP0C0L5 1744 aa31.49■■■□□ 2.63
COL13A1-210ENST00000517713 BCAMP50895 628 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms