RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 LINS1Q8NG48 757 aa13.48□□□□□ -0.25
PDGFRB-203ENST00000517660 TTLL11Q8NHH1 800 aa13.48□□□□□ -0.25
PDGFRB-203ENST00000517660 TBC1D16Q8TBP0 767 aa13.48□□□□□ -0.25
PDGFRB-203ENST00000517660 PAPPA2Q9BXP8 1791 aa13.48□□□□□ -0.25
PDGFRB-203ENST00000517660 RIMBP2O15034 1052 aa13.47□□□□□ -0.25
PDGFRB-203ENST00000517660 NOM1Q5C9Z4 860 aaKnown RBP13.47□□□□□ -0.25
PDGFRB-203ENST00000517660 CDC5LQ99459 802 aaKnown RBP13.47□□□□□ -0.25
PDGFRB-203ENST00000517660 ZC3H12CQ9C0D7 883 aaKnown RBP13.47□□□□□ -0.25
PDGFRB-203ENST00000517660 ANKIB1Q9P2G1 1089 aa13.47□□□□□ -0.25
PDGFRB-203ENST00000517660 ZNF521Q96K83 1311 aa13.46□□□□□ -0.25
PDGFRB-203ENST00000517660 H7C1D1 291 aa13.46□□□□□ -0.25
PDGFRB-203ENST00000517660 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
PDGFRB-203ENST00000517660 REM2Q8IYK8 340 aaPredicted RBP13.46□□□□□ -0.25
PDGFRB-203ENST00000517660 DPF2Q92785 391 aa13.46□□□□□ -0.25
PDGFRB-203ENST00000517660 OTUD5Q96G74 571 aa13.46□□□□□ -0.25
PDGFRB-203ENST00000517660 PLA2G12BQ9BX93 195 aa13.46□□□□□ -0.25
PDGFRB-203ENST00000517660 GGA1Q9UJY5 639 aa13.46□□□□□ -0.25
PDGFRB-203ENST00000517660 RBBP6Q7Z6E9 1792 aaKnown RBP13.45□□□□□ -0.26
PDGFRB-203ENST00000517660 PSMD14O00487 310 aa13.45□□□□□ -0.26
PDGFRB-203ENST00000517660 UFL1O94874 794 aa13.45□□□□□ -0.26
PDGFRB-203ENST00000517660 EN2P19622 333 aaPredicted RBP13.45□□□□□ -0.26
PDGFRB-203ENST00000517660 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
PDGFRB-203ENST00000517660 MOB2Q70IA6 237 aa13.45□□□□□ -0.26
PDGFRB-203ENST00000517660 CDCA5Q96FF9 252 aa13.45□□□□□ -0.26
PDGFRB-203ENST00000517660 GREM2Q9H772 168 aa13.45□□□□□ -0.26
PDGFRB-203ENST00000517660 DBNDD1Q9H9R9 158 aa13.45□□□□□ -0.26
PDGFRB-203ENST00000517660 BSDC1Q9NW68 430 aaPredicted RBP13.45□□□□□ -0.26
PDGFRB-203ENST00000517660 G3V3G9 751 aa13.44□□□□□ -0.26
PDGFRB-203ENST00000517660 ECE2O60344 883 aa13.44□□□□□ -0.26
PDGFRB-203ENST00000517660 ATP2B4P23634 1241 aa13.44□□□□□ -0.26
PDGFRB-203ENST00000517660 CASP7P55210 303 aa13.44□□□□□ -0.26
PDGFRB-203ENST00000517660 BEND3Q5T5X7 828 aa13.44□□□□□ -0.26
PDGFRB-203ENST00000517660 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
PDGFRB-203ENST00000517660 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
PDGFRB-203ENST00000517660 KCNQ5Q9NR82 932 aa13.44□□□□□ -0.26
PDGFRB-203ENST00000517660 RTL9Q8NET4 1388 aa13.44□□□□□ -0.26
PDGFRB-203ENST00000517660 POLR2AP24928 1970 aaKnown RBP13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 XDHP47989 1333 aa13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 LAMB2P55268 1798 aa13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 F6X3S4 739 aa13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 CSF1RP07333 972 aa13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 TM4SF4P48230 202 aa13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 DDX60Q8IY21 1712 aaKnown RBP13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 DCPSQ96C86 337 aaKnown RBP13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 GGA3Q9NZ52 723 aa13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 MINPP1Q9UNW1 487 aa13.43□□□□□ -0.26
PDGFRB-203ENST00000517660 E9PSI1 815 aa13.42□□□□□ -0.26
PDGFRB-203ENST00000517660 RPS12P25398 132 aaKnown RBP13.42□□□□□ -0.26
PDGFRB-203ENST00000517660 IGHMBP2P38935 993 aaKnown RBP13.42□□□□□ -0.26
PDGFRB-203ENST00000517660 CFHR5Q9BXR6 569 aa13.42□□□□□ -0.26
PDGFRB-203ENST00000517660 CCER2I3L3R5 266 aa13.41□□□□□ -0.26
PDGFRB-203ENST00000517660 FKTNO75072 461 aa13.41□□□□□ -0.26
PDGFRB-203ENST00000517660 VIL1P09327 827 aaKnown RBP13.41□□□□□ -0.26
PDGFRB-203ENST00000517660 ITGA6P23229 1130 aa13.41□□□□□ -0.26
PDGFRB-203ENST00000517660 CAP1Q01518 475 aa13.41□□□□□ -0.26
PDGFRB-203ENST00000517660 COL4A1P02462 1669 aa13.4□□□□□ -0.26
PDGFRB-203ENST00000517660 ALDH1L1O75891 902 aa13.4□□□□□ -0.26
PDGFRB-203ENST00000517660 SLFN5Q08AF3 891 aa13.4□□□□□ -0.26
PDGFRB-203ENST00000517660 KIF4BQ2VIQ3 1234 aa13.4□□□□□ -0.26
PDGFRB-203ENST00000517660 OTOP1Q7RTM1 612 aa13.4□□□□□ -0.26
PDGFRB-203ENST00000517660 MPHOSPH8Q99549 860 aa13.4□□□□□ -0.26
PDGFRB-203ENST00000517660 ANKRD2Q9GZV1 360 aa13.4□□□□□ -0.26
PDGFRB-203ENST00000517660 LEMD3Q9Y2U8 911 aa13.4□□□□□ -0.26
PDGFRB-203ENST00000517660 TAF1P21675 1872 aa13.4□□□□□ -0.26
PDGFRB-203ENST00000517660 ANKRD18BA2A2Z9 1011 aa13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 H0YGN5 161 aa13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 UBE2Q2LH0YL09 131 aa13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 CCT4P50991 539 aaKnown RBP13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 FOXO4P98177 505 aa13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 PODNQ7Z5L7 613 aa13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 SULF1Q8IWU6 871 aa13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 C9orf78Q9NZ63 289 aaPredicted RBP13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 TRIOBPQ9H2D6 2365 aa13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 LRRC37AA6NMS7 1700 aa13.39□□□□□ -0.27
PDGFRB-203ENST00000517660 LAMA3Q16787 3333 aa13.38□□□□□ -0.27
PDGFRB-203ENST00000517660 WTIPA6NIX2 430 aaPredicted RBP13.38□□□□□ -0.27
PDGFRB-203ENST00000517660 GRM8O00222 908 aa13.38□□□□□ -0.27
PDGFRB-203ENST00000517660 FKBP1BP68106 108 aa13.38□□□□□ -0.27
PDGFRB-203ENST00000517660 MKRN3Q13064 507 aaKnown RBP13.38□□□□□ -0.27
PDGFRB-203ENST00000517660 IFIT5Q13325 482 aaKnown RBP13.38□□□□□ -0.27
PDGFRB-203ENST00000517660 SLC4A10Q6U841 1118 aa13.38□□□□□ -0.27
PDGFRB-203ENST00000517660 ARMC5Q96C12 935 aa13.38□□□□□ -0.27
PDGFRB-203ENST00000517660 TRIM17Q9Y577 477 aa13.38□□□□□ -0.27
PDGFRB-203ENST00000517660 USP17L3A6NCW0 530 aa13.37□□□□□ -0.27
PDGFRB-203ENST00000517660 USP17L4A6NCW7 530 aa13.37□□□□□ -0.27
PDGFRB-203ENST00000517660 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
PDGFRB-203ENST00000517660 RSBN1LQ6PCB5 846 aaPredicted RBP13.37□□□□□ -0.27
PDGFRB-203ENST00000517660 LMBR1LQ6UX01 489 aa13.37□□□□□ -0.27
PDGFRB-203ENST00000517660 USP17L1Q7RTZ2 530 aa13.37□□□□□ -0.27
PDGFRB-203ENST00000517660 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
PDGFRB-203ENST00000517660 RBM27Q9P2N5 1060 aaKnown RBP13.37□□□□□ -0.27
PDGFRB-203ENST00000517660 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
PDGFRB-203ENST00000517660 UNC80Q8N2C7 3258 aa13.37□□□□□ -0.27
PDGFRB-203ENST00000517660 MED23Q9ULK4 1368 aa13.36□□□□□ -0.27
PDGFRB-203ENST00000517660 EPHA10Q5JZY3 1008 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms