RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 TDO2P48775 406 aa11.66□□□□□ -0.54
EFCAB13-203ENST00000517484 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
EFCAB13-203ENST00000517484 BLOC1S2Q6QNY1 142 aa11.66□□□□□ -0.54
EFCAB13-203ENST00000517484 MINPP1Q9UNW1 487 aa11.66□□□□□ -0.54
EFCAB13-203ENST00000517484 PARP3Q9Y6F1 533 aa11.66□□□□□ -0.54
EFCAB13-203ENST00000517484 PRKAB2O43741 272 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 PRDM1O75626 825 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 GYS1P13807 737 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 SSFA2P28290 1259 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 LPIN2Q92539 896 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 ZKSCAN3Q9BRR0 538 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 GDPD2Q9HCC8 539 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 PRR5LQ6MZQ0 368 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 TMX3Q96JJ7 454 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 HAUS7Q99871 368 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 HMG20BQ9P0W2 317 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 LMO7Q8WWI1 1683 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 CCDC171Q6TFL3 1326 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 ZNF532Q9HCE3 1301 aa11.65□□□□□ -0.54
EFCAB13-203ENST00000517484 ABCC12Q96J65 1359 aa11.65□□□□□ -0.55
EFCAB13-203ENST00000517484 RNF113AO15541 343 aaKnown RBP11.65□□□□□ -0.55
EFCAB13-203ENST00000517484 CYP2E1P05181 493 aaPredicted RBP11.65□□□□□ -0.55
EFCAB13-203ENST00000517484 RBM25P49756 843 aaKnown RBP11.65□□□□□ -0.55
EFCAB13-203ENST00000517484 RBM5P52756 815 aaKnown RBP eCLIP11.65□□□□□ -0.55
EFCAB13-203ENST00000517484 GUCY1B3Q02153 619 aa11.65□□□□□ -0.55
EFCAB13-203ENST00000517484 SPATA5Q8NB90 893 aa11.65□□□□□ -0.55
EFCAB13-203ENST00000517484 SDR42E1Q8WUS8 393 aa11.65□□□□□ -0.55
EFCAB13-203ENST00000517484 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.65□□□□□ -0.55
EFCAB13-203ENST00000517484 GNL3LQ9NVN8 582 aaKnown RBP11.65□□□□□ -0.55
EFCAB13-203ENST00000517484 SALL3Q9BXA9 1300 aa11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 FAM208AQ9UK61 1670 aaKnown RBP11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 M0R2C6 588 aa11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 MBD4O95243 580 aa11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 AK2P54819 239 aa11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 MAP3K12Q12852 859 aa11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 MCTP1Q6DN14 999 aa11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 CLEC4GQ6UXB4 293 aa11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 RALYLQ86SE5 291 aaKnown RBP11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 COL16A1Q07092 1604 aaPredicted RBP11.64□□□□□ -0.55
EFCAB13-203ENST00000517484 GPAA1O43292 621 aa11.63□□□□□ -0.55
EFCAB13-203ENST00000517484 CEBPZQ03701 1054 aaKnown RBP11.63□□□□□ -0.55
EFCAB13-203ENST00000517484 BRF1Q92994 677 aa11.63□□□□□ -0.55
EFCAB13-203ENST00000517484 LSG1Q9H089 658 aaKnown RBP11.63□□□□□ -0.55
EFCAB13-203ENST00000517484 HIP1O00291 1037 aa11.63□□□□□ -0.55
EFCAB13-203ENST00000517484 NFXL1Q6ZNB6 911 aa11.63□□□□□ -0.55
EFCAB13-203ENST00000517484 STK32BQ9NY57 414 aa11.63□□□□□ -0.55
EFCAB13-203ENST00000517484 SLC27A2O14975 620 aa11.63□□□□□ -0.55
EFCAB13-203ENST00000517484 CHMP5Q9NZZ3 219 aa11.63□□□□□ -0.55
EFCAB13-203ENST00000517484 USP42Q9H9J4 1324 aaKnown RBP11.63□□□□□ -0.55
EFCAB13-203ENST00000517484 MRC1P22897 1456 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 CYP2D7A0A087X1C5 515 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 HIBADHP31937 336 aaKnown RBP11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 DZIP1Q86YF9 867 aaKnown RBP11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 AATFQ9NY61 560 aaKnown RBP eCLIP11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 DENND2AQ9ULE3 1009 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 KCPQ6ZWJ8 1503 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 AHDC1Q5TGY3 1603 aaPredicted RBP11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 DYNLL1P63167 89 aaKnown RBP11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 CTDSPL2Q05D32 466 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 TRDNQ13061 729 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 DIXDC1Q155Q3 683 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 NAPBQ9H115 298 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 RGS17Q9UGC6 210 aaPredicted RBP11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 SMC3Q9UQE7 1217 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 DDR1Q08345 913 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 MXD3Q9BW11 206 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 NCOA5Q9HCD5 579 aaKnown RBP11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 SLC4A4Q9Y6R1 1079 aa11.62□□□□□ -0.55
EFCAB13-203ENST00000517484 NHSL1Q5SYE7 1610 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 PRDX5P30044 214 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 SMIM22K7EJ46 135 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 ZNF213O14771 459 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 COL14A1Q05707 1796 aaKnown RBP11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 CIAO1O76071 339 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 CYP21A2P08686 494 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 HSPD1P10809 573 aaKnown RBP11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 PDE6AP16499 860 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 NUP133Q8WUM0 1156 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 NEK1Q96PY6 1258 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 DBNDD1Q9H9R9 158 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 MAST3O60307 1309 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 MROH5Q6ZUA9 1318 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 RAD50Q92878 1312 aa11.61□□□□□ -0.55
EFCAB13-203ENST00000517484 LARGE1O95461 756 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 FGAP02671 866 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 HSPA4P34932 840 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 SCNN1DP51172 638 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 GTF2IP78347 998 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 APOBRQ0VD83 1088 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 LRRFIP1Q32MZ4 808 aaKnown RBP11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 FAM173BQ6P4H8 233 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 MYL10Q9BUA6 226 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 ZNF804BA4D1E1 1349 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 BAG6P46379 1132 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 PICALMQ13492 652 aa11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 NAA16Q6N069 864 aaPredicted RBP11.6□□□□□ -0.55
EFCAB13-203ENST00000517484 Q6ZUG5 572 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms