RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 KRT27Q7Z3Y8 459 aa10.6□□□□□ -0.71
SFXN1-211ENST00000515736 VTI1AQ96AJ9 217 aa10.6□□□□□ -0.71
SFXN1-211ENST00000515736 SLC4A9Q96Q91 983 aa10.6□□□□□ -0.71
SFXN1-211ENST00000515736 SAP130Q9H0E3 1048 aa10.6□□□□□ -0.71
SFXN1-211ENST00000515736 ALS2Q96Q42 1657 aa10.6□□□□□ -0.71
SFXN1-211ENST00000515736 PPEF1O14829 653 aaPredicted RBP10.59□□□□□ -0.71
SFXN1-211ENST00000515736 NDUFB5O43674 189 aa10.59□□□□□ -0.71
SFXN1-211ENST00000515736 WNT7BP56706 349 aa10.59□□□□□ -0.71
SFXN1-211ENST00000515736 TSNAXIP1Q2TAA8 658 aa10.59□□□□□ -0.71
SFXN1-211ENST00000515736 C16orf46Q6P387 395 aa10.59□□□□□ -0.71
SFXN1-211ENST00000515736 TRMT2AQ8IZ69 625 aaKnown RBP10.59□□□□□ -0.71
SFXN1-211ENST00000515736 PNNQ9H307 717 aaKnown RBP10.59□□□□□ -0.71
SFXN1-211ENST00000515736 ETNK1Q9HBU6 452 aa10.59□□□□□ -0.71
SFXN1-211ENST00000515736 BTG4Q9NY30 223 aa10.59□□□□□ -0.71
SFXN1-211ENST00000515736 SERTAD1Q9UHV2 236 aa10.59□□□□□ -0.71
SFXN1-211ENST00000515736 EP400Q96L91 3159 aa10.59□□□□□ -0.71
SFXN1-211ENST00000515736 EDC4Q6P2E9 1401 aaKnown RBP10.58□□□□□ -0.72
SFXN1-211ENST00000515736 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
SFXN1-211ENST00000515736 COL3A1P02461 1466 aaPredicted RBP10.58□□□□□ -0.72
SFXN1-211ENST00000515736 A0A1W2PRU2 124 aa10.58□□□□□ -0.72
SFXN1-211ENST00000515736 FAM83GA6ND36 823 aa10.58□□□□□ -0.72
SFXN1-211ENST00000515736 TREHO43280 583 aa10.58□□□□□ -0.72
SFXN1-211ENST00000515736 MRPL58Q14197 206 aaKnown RBP10.58□□□□□ -0.72
SFXN1-211ENST00000515736 NGDNQ8NEJ9 315 aaKnown RBP10.58□□□□□ -0.72
SFXN1-211ENST00000515736 RUNDC1Q96C34 613 aa10.58□□□□□ -0.72
SFXN1-211ENST00000515736 CCDC136Q96JN2 1154 aa10.58□□□□□ -0.72
SFXN1-211ENST00000515736 KRTAP3-3Q9BYR6 98 aa10.58□□□□□ -0.72
SFXN1-211ENST00000515736 KRTAP3-2Q9BYR7 98 aa10.58□□□□□ -0.72
SFXN1-211ENST00000515736 CYLDQ9NQC7 956 aa10.58□□□□□ -0.72
SFXN1-211ENST00000515736 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.58□□□□□ -0.72
SFXN1-211ENST00000515736 TMPRSS4Q9NRS4 437 aa10.58□□□□□ -0.72
SFXN1-211ENST00000515736 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
SFXN1-211ENST00000515736 BAG6P46379 1132 aa10.57□□□□□ -0.72
SFXN1-211ENST00000515736 ZC3H6P61129 1189 aaKnown RBP10.57□□□□□ -0.72
SFXN1-211ENST00000515736 IRX6P78412 446 aaPredicted RBP10.57□□□□□ -0.72
SFXN1-211ENST00000515736 FMR1Q06787 632 aaKnown RBP eCLIP10.57□□□□□ -0.72
SFXN1-211ENST00000515736 SLFN5Q08AF3 891 aa10.57□□□□□ -0.72
SFXN1-211ENST00000515736 DUSP27Q5VZP5 1158 aa10.57□□□□□ -0.72
SFXN1-211ENST00000515736 CDK15Q96Q40 435 aa10.57□□□□□ -0.72
SFXN1-211ENST00000515736 CITED4Q96RK1 184 aa10.57□□□□□ -0.72
SFXN1-211ENST00000515736 BRPF3Q9ULD4 1205 aa10.57□□□□□ -0.72
SFXN1-211ENST00000515736 CRYBG1Q9Y4K1 1723 aa10.57□□□□□ -0.72
SFXN1-211ENST00000515736 CPSF1Q10570 1443 aaKnown RBP10.57□□□□□ -0.72
SFXN1-211ENST00000515736 NRKQ7Z2Y5 1582 aa10.56□□□□□ -0.72
SFXN1-211ENST00000515736 FOXK2Q01167 660 aa10.56□□□□□ -0.72
SFXN1-211ENST00000515736 DHX9Q08211 1270 aaKnown RBP10.56□□□□□ -0.72
SFXN1-211ENST00000515736 STAG2Q8N3U4 1231 aa10.56□□□□□ -0.72
SFXN1-211ENST00000515736 CDK19Q9BWU1 502 aa10.56□□□□□ -0.72
SFXN1-211ENST00000515736 BACH2Q9BYV9 841 aa10.56□□□□□ -0.72
SFXN1-211ENST00000515736 PRR36Q9H6K5 1346 aa10.56□□□□□ -0.72
SFXN1-211ENST00000515736 LRP5O75197 1615 aa10.55□□□□□ -0.72
SFXN1-211ENST00000515736 PPP1R12BO60237 982 aaPredicted RBP10.55□□□□□ -0.72
SFXN1-211ENST00000515736 EIF1AXP47813 144 aaKnown RBP10.55□□□□□ -0.72
SFXN1-211ENST00000515736 DSC3Q14574 896 aa10.55□□□□□ -0.72
SFXN1-211ENST00000515736 WDR63Q8IWG1 891 aa10.55□□□□□ -0.72
SFXN1-211ENST00000515736 ZNF784Q8NCA9 323 aaPredicted RBP10.55□□□□□ -0.72
SFXN1-211ENST00000515736 DRC1Q96MC2 740 aa10.55□□□□□ -0.72
SFXN1-211ENST00000515736 C2orf49Q9BVC5 232 aaPredicted RBP10.55□□□□□ -0.72
SFXN1-211ENST00000515736 PRDM11Q9NQV5 511 aa10.55□□□□□ -0.72
SFXN1-211ENST00000515736 PHRF1Q9P1Y6 1649 aaKnown RBP10.55□□□□□ -0.72
SFXN1-211ENST00000515736 AATKQ6ZMQ8 1374 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 FZD6O60353 706 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 GNRH1P01148 92 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 CT47B1P0C2W7 299 aaPredicted RBP10.54□□□□□ -0.72
SFXN1-211ENST00000515736 FSHRP23945 695 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 GRM5P41594 1212 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 MTHFSP49914 203 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 AAMPQ13685 434 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 ARID5BQ14865 1188 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 PLA2G2CQ5R387 149 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 COX20Q5RI15 118 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 ALKBH2Q6NS38 261 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 SREK1Q8WXA9 508 aaKnown RBP10.54□□□□□ -0.72
SFXN1-211ENST00000515736 CCDC87Q9NVE4 849 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 SCHIP1Q9P0W5 487 aaPredicted RBP10.54□□□□□ -0.72
SFXN1-211ENST00000515736 STIM2Q9P246 746 aa10.54□□□□□ -0.72
SFXN1-211ENST00000515736 PPIP5K1Q6PFW1 1433 aa10.53□□□□□ -0.72
SFXN1-211ENST00000515736 APAF1O14727 1248 aa10.53□□□□□ -0.72
SFXN1-211ENST00000515736 TNFRSF10BO14763 440 aa10.53□□□□□ -0.72
SFXN1-211ENST00000515736 LILRA1O75019 489 aa10.53□□□□□ -0.72
SFXN1-211ENST00000515736 MTFR1Q15390 333 aa10.53□□□□□ -0.72
SFXN1-211ENST00000515736 FAM182BQ5T319 152 aa10.53□□□□□ -0.72
SFXN1-211ENST00000515736 CYP2U1Q7Z449 544 aa10.53□□□□□ -0.72
SFXN1-211ENST00000515736 SLC9A9Q8IVB4 645 aa10.53□□□□□ -0.72
SFXN1-211ENST00000515736 USP54Q70EL1 1684 aa10.53□□□□□ -0.72
SFXN1-211ENST00000515736 THSD7AQ9UPZ6 1657 aa10.53□□□□□ -0.72
SFXN1-211ENST00000515736 TNS1Q9HBL0 1735 aaKnown RBP10.53□□□□□ -0.72
SFXN1-211ENST00000515736 A6NJY4 79 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 RNF223E7ERA6 249 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 FYB1O15117 783 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 IGHA2P01877 340 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 PLCB3Q01970 1234 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 DMRTB1Q96MA1 342 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 PRKD2Q9BZL6 878 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 STRN4Q9NRL3 753 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 SPATA31A5Q5VU36 1347 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 SPATA31A7Q8IWB4 1347 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 FANCIQ9NVI1 1328 aa10.52□□□□□ -0.73
SFXN1-211ENST00000515736 SCAMP3O14828 347 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms