RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 SF3B2Q13435 895 aaKnown RBP11.05□□□□□ -0.64
CPNE4-213ENST00000515418 FLAD1Q8NFF5 587 aa11.05□□□□□ -0.64
CPNE4-213ENST00000515418 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.05□□□□□ -0.64
CPNE4-213ENST00000515418 KLRK1P26718 216 aa11.05□□□□□ -0.64
CPNE4-213ENST00000515418 BECN1Q14457 450 aa11.05□□□□□ -0.64
CPNE4-213ENST00000515418 RPGRQ92834 1020 aaKnown RBP11.05□□□□□ -0.64
CPNE4-213ENST00000515418 HMG20BQ9P0W2 317 aa11.05□□□□□ -0.64
CPNE4-213ENST00000515418 GRAPQ13588 217 aa11.04□□□□□ -0.64
CPNE4-213ENST00000515418 RASEFQ8IZ41 740 aa11.04□□□□□ -0.64
CPNE4-213ENST00000515418 GRAPLQ8TC17 118 aaPredicted RBP11.04□□□□□ -0.64
CPNE4-213ENST00000515418 PIH1D3Q9NQM4 214 aaKnown RBP11.04□□□□□ -0.64
CPNE4-213ENST00000515418 STK32BQ9NY57 414 aa11.04□□□□□ -0.64
CPNE4-213ENST00000515418 RNF113AO15541 343 aaKnown RBP11.03□□□□□ -0.64
CPNE4-213ENST00000515418 ARID4AP29374 1257 aaPredicted RBP11.03□□□□□ -0.64
CPNE4-213ENST00000515418 HSPA4P34932 840 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 BAG6P46379 1132 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 RASGRF1Q13972 1273 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 CRY2Q49AN0 593 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 ILDR1Q86SU0 546 aaPredicted RBP11.03□□□□□ -0.64
CPNE4-213ENST00000515418 ZNF512BQ96KM6 892 aaPredicted RBP11.03□□□□□ -0.64
CPNE4-213ENST00000515418 RAD50Q92878 1312 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 CCDC171Q6TFL3 1326 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 UQCRFS1P1P0C7P4 283 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 KCNJ4P48050 445 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 UBE4AQ14139 1066 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 MCMDC2Q4G0Z9 681 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 PRPF40BQ6NWY9 871 aaKnown RBP11.03□□□□□ -0.64
CPNE4-213ENST00000515418 TXNRD3Q86VQ6 643 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 SPATA5Q8NB90 893 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 FAM84BQ96KN1 310 aaPredicted RBP11.03□□□□□ -0.64
CPNE4-213ENST00000515418 ANKIB1Q9P2G1 1089 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 PARP3Q9Y6F1 533 aa11.03□□□□□ -0.64
CPNE4-213ENST00000515418 IDH1O75874 414 aaKnown RBP11.02□□□□□ -0.65
CPNE4-213ENST00000515418 MCCP23508 829 aa11.02□□□□□ -0.65
CPNE4-213ENST00000515418 MAP4K1Q92918 833 aa11.02□□□□□ -0.65
CPNE4-213ENST00000515418 OSBP2Q969R2 916 aa11.02□□□□□ -0.65
CPNE4-213ENST00000515418 RBM17Q96I25 401 aaKnown RBP11.02□□□□□ -0.65
CPNE4-213ENST00000515418 GPR101Q96P66 508 aaPredicted RBP11.02□□□□□ -0.65
CPNE4-213ENST00000515418 SNX14Q9Y5W7 946 aa11.02□□□□□ -0.65
CPNE4-213ENST00000515418 MED23Q9ULK4 1368 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 RABEP1Q15276 862 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 WASHC4Q2M389 1173 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 ZMYM1Q5SVZ6 1142 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 BRIP1Q9BX63 1249 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 ANKRD2Q9GZV1 360 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 RBM8AQ9Y5S9 174 aaKnown RBP11.01□□□□□ -0.65
CPNE4-213ENST00000515418 A0A1B0GUL6 1792 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 RGPD3A6NKT7 1758 aaPredicted RBP11.01□□□□□ -0.65
CPNE4-213ENST00000515418 RGPD4Q7Z3J3 1758 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 ZNF804BA4D1E1 1349 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 KLRG2A4D1S0 409 aaPredicted RBP11.01□□□□□ -0.65
CPNE4-213ENST00000515418 M0R2C6 588 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 NEK4P51957 841 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 NECTIN1Q15223 517 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 SLC9C2Q5TAH2 1124 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 ERICH6Q7L0X2 663 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 VPS37DQ86XT2 251 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 HSCBQ8IWL3 235 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 SNX21Q969T3 373 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 UPF3BQ9BZI7 483 aaKnown RBP11.01□□□□□ -0.65
CPNE4-213ENST00000515418 PUS7LQ9H0K6 701 aaKnown RBP11.01□□□□□ -0.65
CPNE4-213ENST00000515418 NSFL1CQ9UNZ2 370 aaKnown RBP11.01□□□□□ -0.65
CPNE4-213ENST00000515418 TAF6LQ9Y6J9 622 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 ANKRD31Q8N7Z5 1873 aa11.01□□□□□ -0.65
CPNE4-213ENST00000515418 ARAP2Q8WZ64 1704 aa11□□□□□ -0.65
CPNE4-213ENST00000515418 CPA1P15085 419 aa11□□□□□ -0.65
CPNE4-213ENST00000515418 HOXA10P31260 410 aaPredicted RBP11□□□□□ -0.65
CPNE4-213ENST00000515418 GPSM2P81274 684 aa11□□□□□ -0.65
CPNE4-213ENST00000515418 CAVIN4Q5BKX8 364 aa11□□□□□ -0.65
CPNE4-213ENST00000515418 OLFM4Q6UX06 510 aa11□□□□□ -0.65
CPNE4-213ENST00000515418 SLKQ9H2G2 1235 aaPredicted RBP11□□□□□ -0.65
CPNE4-213ENST00000515418 HELLSQ9NRZ9 838 aa11□□□□□ -0.65
CPNE4-213ENST00000515418 WWC3Q9ULE0 1092 aa11□□□□□ -0.65
CPNE4-213ENST00000515418 MAST3O60307 1309 aa11□□□□□ -0.65
CPNE4-213ENST00000515418 EPB41L2O43491 1005 aaKnown RBP10.99□□□□□ -0.65
CPNE4-213ENST00000515418 BBOX1O75936 387 aa10.99□□□□□ -0.65
CPNE4-213ENST00000515418 SRGNP10124 158 aa10.99□□□□□ -0.65
CPNE4-213ENST00000515418 CACNB1Q02641 598 aaPredicted RBP10.99□□□□□ -0.65
CPNE4-213ENST00000515418 COL9A3Q14050 684 aaPredicted RBP10.99□□□□□ -0.65
CPNE4-213ENST00000515418 TTF1Q15361 905 aaPredicted RBP10.99□□□□□ -0.65
CPNE4-213ENST00000515418 ADCK5Q3MIX3 580 aa10.99□□□□□ -0.65
CPNE4-213ENST00000515418 CREB3L3Q68CJ9 461 aa10.99□□□□□ -0.65
CPNE4-213ENST00000515418 FBXO33Q7Z6M2 555 aa10.99□□□□□ -0.65
CPNE4-213ENST00000515418 FOXD4L1Q9NU39 408 aa10.99□□□□□ -0.65
CPNE4-213ENST00000515418 MYH7P12883 1935 aa10.99□□□□□ -0.65
CPNE4-213ENST00000515418 HIBADHP31937 336 aaKnown RBP10.99□□□□□ -0.65
CPNE4-213ENST00000515418 ANAPC15P60006 121 aa10.99□□□□□ -0.65
CPNE4-213ENST00000515418 CRAMP1Q96RY5 1269 aa10.99□□□□□ -0.65
CPNE4-213ENST00000515418 JAG2Q9Y219 1238 aa10.99□□□□□ -0.65
CPNE4-213ENST00000515418 RFX7Q2KHR2 1363 aa10.98□□□□□ -0.65
CPNE4-213ENST00000515418 ZNF532Q9HCE3 1301 aa10.98□□□□□ -0.65
CPNE4-213ENST00000515418 A0A0G2JLW4 131 aa10.98□□□□□ -0.65
CPNE4-213ENST00000515418 SLC27A2O14975 620 aa10.98□□□□□ -0.65
CPNE4-213ENST00000515418 FRAT2O75474 233 aaPredicted RBP10.98□□□□□ -0.65
CPNE4-213ENST00000515418 HSPD1P10809 573 aaKnown RBP10.98□□□□□ -0.65
CPNE4-213ENST00000515418 ADD2P35612 726 aa10.98□□□□□ -0.65
CPNE4-213ENST00000515418 NOL8Q76FK4 1167 aaKnown RBP10.98□□□□□ -0.65
CPNE4-213ENST00000515418 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPNE4-213ENST00000515418 GNL3LQ9NVN8 582 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms