RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 CMTR1Q8N1G2 835 aaKnown RBP9.19□□□□□ -0.94
NPHP3-211ENST00000515289 ZNF280CQ8ND82 737 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 PHC3Q8NDX5 983 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 USP20Q9Y2K6 914 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 KIF21AQ7Z4S6 1674 aa9.19□□□□□ -0.94
NPHP3-211ENST00000515289 SMAD7O15105 426 aaKnown RBP9.18□□□□□ -0.94
NPHP3-211ENST00000515289 CD2BP2O95400 341 aaKnown RBP9.18□□□□□ -0.94
NPHP3-211ENST00000515289 MAP4K4O95819 1239 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-211ENST00000515289 IFRD2Q12894 506 aaPredicted RBP9.18□□□□□ -0.94
NPHP3-211ENST00000515289 C1orf127Q8N9H9 656 aa9.18□□□□□ -0.94
NPHP3-211ENST00000515289 FEZ1Q99689 392 aa9.18□□□□□ -0.94
NPHP3-211ENST00000515289 WDR97A6NE52 1622 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 APOBRQ0VD83 1088 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 RASGRF1Q13972 1273 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 GRIN2CQ14957 1233 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 DDR2Q16832 855 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 C16orf86Q6ZW13 317 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 BTLAQ7Z6A9 289 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 HSH2DQ96JZ2 352 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 EHD4Q9H223 541 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 ABI2Q9NYB9 513 aaPredicted RBP9.17□□□□□ -0.94
NPHP3-211ENST00000515289 UBP1Q9NZI7 540 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 CNTN3Q9P232 1028 aa9.17□□□□□ -0.94
NPHP3-211ENST00000515289 G3BP2Q9UN86 482 aaKnown RBP9.17□□□□□ -0.94
NPHP3-211ENST00000515289 CLIP1P30622 1438 aa9.16□□□□□ -0.94
NPHP3-211ENST00000515289 SLITRK4Q8IW52 837 aa9.16□□□□□ -0.94
NPHP3-211ENST00000515289 EXOC8Q8IYI6 725 aa9.16□□□□□ -0.94
NPHP3-211ENST00000515289 CELF2-AS1Q8N7Q2 184 aa9.16□□□□□ -0.94
NPHP3-211ENST00000515289 NKD1Q969G9 470 aa9.16□□□□□ -0.94
NPHP3-211ENST00000515289 A0A1W2PP55 124 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 PDPK1O15530 556 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 VIL1P09327 827 aaKnown RBP9.15□□□□□ -0.94
NPHP3-211ENST00000515289 TATP17735 454 aaPredicted RBP9.15□□□□□ -0.94
NPHP3-211ENST00000515289 GPC1P35052 558 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 MASP1P48740 699 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 LIG3P49916 1009 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 FCGRTP55899 365 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 LMNB2Q03252 620 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 FAM160A1Q05DH4 1040 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 C4orf17Q53FE4 359 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 SNAP47Q5SQN1 464 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 KLRG1Q96E93 195 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 OXCT2Q9BYC2 517 aaPredicted RBP9.15□□□□□ -0.94
NPHP3-211ENST00000515289 PCGF6Q9BYE7 350 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 GRIP2Q9C0E4 1043 aa9.15□□□□□ -0.94
NPHP3-211ENST00000515289 MRC2Q9UBG0 1479 aa9.15□□□□□ -0.95
NPHP3-211ENST00000515289 EGFRP00533 1210 aa9.14□□□□□ -0.95
NPHP3-211ENST00000515289 PF4P02776 101 aa9.14□□□□□ -0.95
NPHP3-211ENST00000515289 EPB42P16452 691 aa9.14□□□□□ -0.95
NPHP3-211ENST00000515289 CES1P23141 567 aa9.14□□□□□ -0.95
NPHP3-211ENST00000515289 GGCXP38435 758 aa9.14□□□□□ -0.95
NPHP3-211ENST00000515289 SQSTM1Q13501 440 aa9.14□□□□□ -0.95
NPHP3-211ENST00000515289 MAP3K11Q16584 847 aa9.14□□□□□ -0.95
NPHP3-211ENST00000515289 GOLM1Q8NBJ4 401 aa9.14□□□□□ -0.95
NPHP3-211ENST00000515289 JDP2Q8WYK2 163 aa9.14□□□□□ -0.95
NPHP3-211ENST00000515289 EMID1Q96A84 441 aaPredicted RBP9.14□□□□□ -0.95
NPHP3-211ENST00000515289 CARMIL1Q5VZK9 1371 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 ROBO2Q9HCK4 1378 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 ABCA5Q8WWZ7 1642 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 POTEMA6NI47 508 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 XYLBO75191 536 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 EDN3P14138 238 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 CRKP46108 304 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 CAMK2GQ13555 558 aaPredicted RBP9.13□□□□□ -0.95
NPHP3-211ENST00000515289 C2orf27AQ580R0 203 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 FAM196AQ6ZSG2 479 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 MORC4Q8TE76 937 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 AIDAQ96BJ3 306 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 ABCB6Q9NP58 842 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 C11orf16Q9NQ32 467 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 ACTR10Q9NZ32 417 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 TLR6Q9Y2C9 796 aa9.13□□□□□ -0.95
NPHP3-211ENST00000515289 TMEM238LA0A1B0GVL6 79 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 GRNP28799 593 aaKnown RBP9.12□□□□□ -0.95
NPHP3-211ENST00000515289 GIPRP48546 466 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 EIF6P56537 245 aaKnown RBP9.12□□□□□ -0.95
NPHP3-211ENST00000515289 NNTQ13423 1086 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 ODR4Q5SWX8 454 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 PEAR1Q5VY43 1037 aaPredicted RBP9.12□□□□□ -0.95
NPHP3-211ENST00000515289 DTHD1Q6ZMT9 781 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 CCDC81Q6ZN84 652 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 FMNL3Q8IVF7 1028 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 FAM169BQ8N8A8 192 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 OR6P1Q8NGX9 317 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 AGBL1Q96MI9 1066 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 LRRC3Q9BY71 257 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 ZFYVE1Q9HBF4 777 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 PPT2Q9UMR5 302 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 MAPK8IP1Q9UQF2 711 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 AKAP2Q9Y2D5 859 aa9.12□□□□□ -0.95
NPHP3-211ENST00000515289 TARBP1Q13395 1621 aaKnown RBP9.12□□□□□ -0.95
NPHP3-211ENST00000515289 ARAP1Q96P48 1450 aa9.11□□□□□ -0.95
NPHP3-211ENST00000515289 WNT7AO00755 349 aa9.11□□□□□ -0.95
NPHP3-211ENST00000515289 PEX14O75381 377 aa9.11□□□□□ -0.95
NPHP3-211ENST00000515289 FBXO24O75426 580 aa9.11□□□□□ -0.95
NPHP3-211ENST00000515289 PTPN5P54829 565 aa9.11□□□□□ -0.95
NPHP3-211ENST00000515289 RELBQ01201 579 aa9.11□□□□□ -0.95
NPHP3-211ENST00000515289 SLC27A3Q5K4L6 730 aa9.11□□□□□ -0.95
NPHP3-211ENST00000515289 TTC39BQ5VTQ0 682 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms