RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 BIN2Q9UBW5 565 aaPredicted RBP18.28■□□□□ 0.52
TRIM41-207ENST00000515223 FSD2A1L4K1 749 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 LMAN1P49257 510 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 PSMD1Q99460 953 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 ZSCAN16Q9H4T2 348 aaPredicted RBP18.28■□□□□ 0.52
TRIM41-207ENST00000515223 STX1AQ16623 288 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 SPAG5Q96R06 1193 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 ESYT1Q9BSJ8 1104 aa18.28■□□□□ 0.52
TRIM41-207ENST00000515223 SPATA31E1Q6ZUB1 1445 aa18.27■□□□□ 0.52
TRIM41-207ENST00000515223 MAGEB6P1A0A0J9YX57 407 aa18.27■□□□□ 0.52
TRIM41-207ENST00000515223 GNAT2P19087 354 aa18.27■□□□□ 0.52
TRIM41-207ENST00000515223 BIN1O00499 593 aa18.27■□□□□ 0.52
TRIM41-207ENST00000515223 ZNF354CQ86Y25 554 aa18.27■□□□□ 0.52
TRIM41-207ENST00000515223 GIGYF2Q6Y7W6 1299 aaKnown RBP18.27■□□□□ 0.52
TRIM41-207ENST00000515223 NEMFO60524 1076 aa18.27■□□□□ 0.51
TRIM41-207ENST00000515223 GSDMDP57764 484 aa18.27■□□□□ 0.51
TRIM41-207ENST00000515223 ANKRD44Q8N8A2 993 aa18.27■□□□□ 0.51
TRIM41-207ENST00000515223 CALM1P0DP23 149 aa18.26■□□□□ 0.51
TRIM41-207ENST00000515223 CALM2P0DP24 149 aa18.26■□□□□ 0.51
TRIM41-207ENST00000515223 CALM3P0DP25 149 aa18.26■□□□□ 0.51
TRIM41-207ENST00000515223 HLTFQ14527 1009 aaKnown RBP eCLIP18.26■□□□□ 0.51
TRIM41-207ENST00000515223 PLEKHM2Q8IWE5 1019 aa18.26■□□□□ 0.51
TRIM41-207ENST00000515223 BRF1Q92994 677 aa18.26■□□□□ 0.51
TRIM41-207ENST00000515223 WWC3Q9ULE0 1092 aa18.26■□□□□ 0.51
TRIM41-207ENST00000515223 POLR3GO15318 223 aaPredicted RBP18.26■□□□□ 0.51
TRIM41-207ENST00000515223 MMRN2Q9H8L6 949 aa18.26■□□□□ 0.51
TRIM41-207ENST00000515223 LMTK3Q96Q04 1460 aa18.26■□□□□ 0.51
TRIM41-207ENST00000515223 TRAPPC3LQ5T215 181 aa18.26■□□□□ 0.51
TRIM41-207ENST00000515223 STAT6P42226 847 aa18.25■□□□□ 0.51
TRIM41-207ENST00000515223 CDCA7Q9BWT1 371 aaPredicted RBP18.25■□□□□ 0.51
TRIM41-207ENST00000515223 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
TRIM41-207ENST00000515223 MCMDC2Q4G0Z9 681 aa18.25■□□□□ 0.51
TRIM41-207ENST00000515223 CABLES1Q8TDN4 633 aa18.25■□□□□ 0.51
TRIM41-207ENST00000515223 ALG1Q9BT22 464 aa18.25■□□□□ 0.51
TRIM41-207ENST00000515223 SH2D4AQ9H788 454 aa18.25■□□□□ 0.51
TRIM41-207ENST00000515223 ZNF165P49910 485 aa18.25■□□□□ 0.51
TRIM41-207ENST00000515223 DDX12PQ92771 950 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 ATP10BO94823 1461 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 A2MP01023 1474 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 SHTN1A0MZ66 631 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 IRS4O14654 1257 aaPredicted RBP18.24■□□□□ 0.51
TRIM41-207ENST00000515223 N4BP3O15049 544 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 AKR1B10O60218 316 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 CALML3P27482 149 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 RBM17Q96I25 401 aaKnown RBP18.24■□□□□ 0.51
TRIM41-207ENST00000515223 KDM5BQ9UGL1 1544 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 CAVIN2O95810 425 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 LDHBP07195 334 aaKnown RBP18.24■□□□□ 0.51
TRIM41-207ENST00000515223 KRT24Q2M2I5 525 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 DCAF5Q96JK2 942 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 TCEANC2Q96MN5 208 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 KDM6BO15054 1643 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 FERP16591 822 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 UBE4AQ14139 1066 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 TAF12Q16514 161 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 USP26Q9BXU7 913 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 IKBKGQ9Y6K9 419 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 LINS1Q8NG48 757 aa18.24■□□□□ 0.51
TRIM41-207ENST00000515223 RRP36Q96EU6 259 aaKnown RBP18.24■□□□□ 0.51
TRIM41-207ENST00000515223 GOLGA6L9A6NEM1 432 aa18.23■□□□□ 0.51
TRIM41-207ENST00000515223 RIMBP2O15034 1052 aa18.23■□□□□ 0.51
TRIM41-207ENST00000515223 DNM1Q05193 864 aaKnown RBP18.23■□□□□ 0.51
TRIM41-207ENST00000515223 CEP135Q66GS9 1140 aa18.23■□□□□ 0.51
TRIM41-207ENST00000515223 TTC16Q8NEE8 873 aa18.23■□□□□ 0.51
TRIM41-207ENST00000515223 SYKP43405 635 aa18.23■□□□□ 0.51
TRIM41-207ENST00000515223 ANO6Q4KMQ2 910 aa18.23■□□□□ 0.51
TRIM41-207ENST00000515223 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
TRIM41-207ENST00000515223 VAMP4O75379 141 aa18.23■□□□□ 0.51
TRIM41-207ENST00000515223 PPIP5K1Q6PFW1 1433 aa18.22■□□□□ 0.51
TRIM41-207ENST00000515223 CCDC186Q7Z3E2 898 aa18.22■□□□□ 0.51
TRIM41-207ENST00000515223 TTC6Q86TZ1 520 aa18.22■□□□□ 0.51
TRIM41-207ENST00000515223 NFATC2IPQ8NCF5 419 aa18.22■□□□□ 0.51
TRIM41-207ENST00000515223 TMC6Q7Z403 805 aa18.22■□□□□ 0.51
TRIM41-207ENST00000515223 GNPATO15228 680 aa18.22■□□□□ 0.51
TRIM41-207ENST00000515223 GCC2Q8IWJ2 1684 aa18.22■□□□□ 0.51
TRIM41-207ENST00000515223 EHBP1Q8NDI1 1231 aa18.22■□□□□ 0.51
TRIM41-207ENST00000515223 RRAGBQ5VZM2 374 aa18.22■□□□□ 0.51
TRIM41-207ENST00000515223 BCCIPQ9P287 314 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRIM41-207ENST00000515223 SPAG1Q07617 926 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 KIAA0753Q2KHM9 967 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 KRT79Q5XKE5 535 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 RTL9Q8NET4 1388 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 HSPA2P54652 639 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 ISM2Q6H9L7 571 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 CEP85Q6P2H3 762 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 RIMS2Q9UQ26 1411 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 IGSF3O75054 1194 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 APBB1IPQ7Z5R6 666 aaPredicted RBP18.21■□□□□ 0.51
TRIM41-207ENST00000515223 KCNG4Q8TDN1 519 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 DCTPP1Q9H773 170 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 DUOX2Q9NRD8 1548 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 PCDH11XQ9BZA7 1347 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 PCDH11YQ9BZA8 1340 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 PLCH2O75038 1416 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 BEGAINQ9BUH8 593 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 GJA3Q9Y6H8 435 aa18.21■□□□□ 0.51
TRIM41-207ENST00000515223 CNBD1Q8NA66 436 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 PSMA7O14818 248 aa18.2■□□□□ 0.5
TRIM41-207ENST00000515223 BRDTQ58F21 947 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms