RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 MYH13Q9UKX3 1938 aa18.59■□□□□ 0.57
SGCA-211ENST00000514934 ANKRD18BA2A2Z9 1011 aa18.59■□□□□ 0.57
SGCA-211ENST00000514934 RABL6Q3YEC7 729 aaPredicted RBP18.59■□□□□ 0.57
SGCA-211ENST00000514934 ANKRD44Q8N8A2 993 aa18.59■□□□□ 0.57
SGCA-211ENST00000514934 ZNF594Q96JF6 807 aaPredicted RBP18.59■□□□□ 0.57
SGCA-211ENST00000514934 MXD3Q9BW11 206 aa18.59■□□□□ 0.57
SGCA-211ENST00000514934 TLL2Q9Y6L7 1015 aa18.59■□□□□ 0.57
SGCA-211ENST00000514934 USP17L3A6NCW0 530 aa18.58■□□□□ 0.56
SGCA-211ENST00000514934 USP17L4A6NCW7 530 aa18.58■□□□□ 0.56
SGCA-211ENST00000514934 IFIT5Q13325 482 aaKnown RBP18.58■□□□□ 0.56
SGCA-211ENST00000514934 KIF4BQ2VIQ3 1234 aa18.58■□□□□ 0.56
SGCA-211ENST00000514934 ALDH1L2Q3SY69 923 aa18.58■□□□□ 0.56
SGCA-211ENST00000514934 SLC4A10Q6U841 1118 aa18.58■□□□□ 0.56
SGCA-211ENST00000514934 USP17L1Q7RTZ2 530 aa18.58■□□□□ 0.56
SGCA-211ENST00000514934 ANKRD2Q9GZV1 360 aa18.58■□□□□ 0.56
SGCA-211ENST00000514934 BRPF1P55201 1214 aaPredicted RBP18.57■□□□□ 0.56
SGCA-211ENST00000514934 DEFB115Q30KQ5 88 aa18.57■□□□□ 0.56
SGCA-211ENST00000514934 CDC37L1Q7L3B6 337 aa18.57■□□□□ 0.56
SGCA-211ENST00000514934 SAPCD2Q86UD0 394 aa18.57■□□□□ 0.56
SGCA-211ENST00000514934 MPHOSPH8Q99549 860 aa18.57■□□□□ 0.56
SGCA-211ENST00000514934 COA1Q9GZY4 146 aa18.57■□□□□ 0.56
SGCA-211ENST00000514934 USP44Q9H0E7 712 aa18.57■□□□□ 0.56
SGCA-211ENST00000514934 WDR33Q9C0J8 1336 aaKnown RBP18.56■□□□□ 0.56
SGCA-211ENST00000514934 LAMB1P07942 1786 aa18.56■□□□□ 0.56
SGCA-211ENST00000514934 TAF5LO75529 589 aa18.56■□□□□ 0.56
SGCA-211ENST00000514934 CELF2O95319 508 aaKnown RBP18.56■□□□□ 0.56
SGCA-211ENST00000514934 USP48Q86UV5 1035 aa18.56■□□□□ 0.56
SGCA-211ENST00000514934 HELBQ8NG08 1087 aaPredicted RBP18.56■□□□□ 0.56
SGCA-211ENST00000514934 C9orf78Q9NZ63 289 aaPredicted RBP18.56■□□□□ 0.56
SGCA-211ENST00000514934 ADM5C9JUS6 153 aa18.55■□□□□ 0.56
SGCA-211ENST00000514934 STRIP1Q5VSL9 837 aa18.55■□□□□ 0.56
SGCA-211ENST00000514934 PUS3Q9BZE2 481 aaKnown RBP18.55■□□□□ 0.56
SGCA-211ENST00000514934 BICC1Q9H694 974 aaKnown RBP18.55■□□□□ 0.56
SGCA-211ENST00000514934 WBP1LQ9NX94 342 aa18.55■□□□□ 0.56
SGCA-211ENST00000514934 PAPPA2Q9BXP8 1791 aa18.55■□□□□ 0.56
SGCA-211ENST00000514934 FOXN1O15353 648 aa18.54■□□□□ 0.56
SGCA-211ENST00000514934 CT47B1P0C2W7 299 aaPredicted RBP18.54■□□□□ 0.56
SGCA-211ENST00000514934 USP17L8P0C7I0 530 aa18.54■□□□□ 0.56
SGCA-211ENST00000514934 ZBED3Q96IU2 234 aaPredicted RBP18.54■□□□□ 0.56
SGCA-211ENST00000514934 HHIPL1Q96JK4 782 aa18.54■□□□□ 0.56
SGCA-211ENST00000514934 ABT1Q9ULW3 272 aaKnown RBP18.54■□□□□ 0.56
SGCA-211ENST00000514934 RIPOR2Q9Y4F9 1068 aa18.54■□□□□ 0.56
SGCA-211ENST00000514934 AKAP11Q9UKA4 1901 aa18.53■□□□□ 0.56
SGCA-211ENST00000514934 RBM26Q5T8P6 1007 aaKnown RBP18.53■□□□□ 0.56
SGCA-211ENST00000514934 CYP4F22Q6NT55 531 aa18.53■□□□□ 0.56
SGCA-211ENST00000514934 KRT26Q7Z3Y9 468 aa18.53■□□□□ 0.56
SGCA-211ENST00000514934 CERS5Q8N5B7 392 aa18.53■□□□□ 0.56
SGCA-211ENST00000514934 CAPNS2Q96L46 248 aa18.53■□□□□ 0.56
SGCA-211ENST00000514934 CD209Q9NNX6 404 aa18.53■□□□□ 0.56
SGCA-211ENST00000514934 MYOZ2Q9NPC6 264 aa18.53■□□□□ 0.56
SGCA-211ENST00000514934 GGA3Q9NZ52 723 aa18.53■□□□□ 0.56
SGCA-211ENST00000514934 IL1R1P14778 569 aa18.52■□□□□ 0.56
SGCA-211ENST00000514934 CCDC57Q2TAC2 916 aa18.52■□□□□ 0.56
SGCA-211ENST00000514934 VGLL2Q8N8G2 317 aa18.52■□□□□ 0.56
SGCA-211ENST00000514934 CHMP3Q9Y3E7 222 aa18.52■□□□□ 0.56
SGCA-211ENST00000514934 PITPNM2Q9BZ72 1349 aa18.51■□□□□ 0.55
SGCA-211ENST00000514934 G3V3G9 751 aa18.51■□□□□ 0.55
SGCA-211ENST00000514934 SCARF1Q14162 830 aa18.51■□□□□ 0.55
SGCA-211ENST00000514934 DCAF8Q5TAQ9 597 aa18.51■□□□□ 0.55
SGCA-211ENST00000514934 LDHAL6AQ6ZMR3 332 aa18.51■□□□□ 0.55
SGCA-211ENST00000514934 MIER1Q8N108 512 aa18.51■□□□□ 0.55
SGCA-211ENST00000514934 CASP8AP2Q9UKL3 1982 aa18.51■□□□□ 0.55
SGCA-211ENST00000514934 MYO3BQ8WXR4 1341 aa18.5■□□□□ 0.55
SGCA-211ENST00000514934 RFX5P48382 616 aaPredicted RBP18.5■□□□□ 0.55
SGCA-211ENST00000514934 RARSP54136 660 aaKnown RBP18.5■□□□□ 0.55
SGCA-211ENST00000514934 NBPF9Q3BBW0 867 aa18.5■□□□□ 0.55
SGCA-211ENST00000514934 ANGEL2Q5VTE6 544 aaKnown RBP18.5■□□□□ 0.55
SGCA-211ENST00000514934 SMC4Q9NTJ3 1288 aa18.5■□□□□ 0.55
SGCA-211ENST00000514934 WNT10BO00744 389 aa18.49■□□□□ 0.55
SGCA-211ENST00000514934 GTF2IP78347 998 aa18.49■□□□□ 0.55
SGCA-211ENST00000514934 LRRC24Q50LG9 513 aa18.49■□□□□ 0.55
SGCA-211ENST00000514934 TTLL5Q6EMB2 1281 aa18.49■□□□□ 0.55
SGCA-211ENST00000514934 OTOFQ9HC10 1997 aa18.49■□□□□ 0.55
SGCA-211ENST00000514934 FAM155AB1AL88 458 aaPredicted RBP18.48■□□□□ 0.55
SGCA-211ENST00000514934 AOC2O75106 756 aa18.48■□□□□ 0.55
SGCA-211ENST00000514934 DCPSQ96C86 337 aaKnown RBP18.48■□□□□ 0.55
SGCA-211ENST00000514934 CDCA5Q96FF9 252 aa18.48■□□□□ 0.55
SGCA-211ENST00000514934 ZIC5Q96T25 663 aa18.48■□□□□ 0.55
SGCA-211ENST00000514934 NOB1Q9ULX3 412 aaKnown RBP18.48■□□□□ 0.55
SGCA-211ENST00000514934 SCAF8Q9UPN6 1271 aaKnown RBP18.48■□□□□ 0.55
SGCA-211ENST00000514934 AOX1Q06278 1338 aa18.48■□□□□ 0.55
SGCA-211ENST00000514934 UBE4AQ14139 1066 aa18.47■□□□□ 0.55
SGCA-211ENST00000514934 KLHDC4Q8TBB5 520 aa18.47■□□□□ 0.55
SGCA-211ENST00000514934 FAM84BQ96KN1 310 aaPredicted RBP18.47■□□□□ 0.55
SGCA-211ENST00000514934 ZNF408Q9H9D4 720 aa18.47■□□□□ 0.55
SGCA-211ENST00000514934 CNNM1Q9NRU3 951 aa18.47■□□□□ 0.55
SGCA-211ENST00000514934 FAM205AQ6ZU69 1335 aa18.47■□□□□ 0.55
SGCA-211ENST00000514934 HSPA8P11142 646 aaKnown RBP18.46■□□□□ 0.55
SGCA-211ENST00000514934 ECE1P42892 770 aa18.46■□□□□ 0.55
SGCA-211ENST00000514934 KCNJ4P48050 445 aa18.46■□□□□ 0.55
SGCA-211ENST00000514934 FKBP1AP62942 108 aaKnown RBP18.46■□□□□ 0.55
SGCA-211ENST00000514934 KIAA0825Q8IV33 1275 aa18.46■□□□□ 0.55
SGCA-211ENST00000514934 TDRD7Q8NHU6 1098 aaKnown RBP18.46■□□□□ 0.55
SGCA-211ENST00000514934 GBA2Q9HCG7 927 aaPredicted RBP18.46■□□□□ 0.55
SGCA-211ENST00000514934 PCDHAC2Q9Y5I4 1007 aa18.46■□□□□ 0.55
SGCA-211ENST00000514934 SSC5DA1L4H1 1573 aa18.46■□□□□ 0.55
SGCA-211ENST00000514934 SASH1O94885 1247 aa18.45■□□□□ 0.54
SGCA-211ENST00000514934 MAP2K2P36507 400 aa18.45■□□□□ 0.54
SGCA-211ENST00000514934 MMP14P50281 582 aa18.45■□□□□ 0.54
SGCA-211ENST00000514934 SULF1Q8IWU6 871 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms