RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
SH3D19-209ENST00000514013 HABP4Q5JVS0 413 aaKnown RBP12.07□□□□□ -0.48
SH3D19-209ENST00000514013 ZNF296Q8WUU4 475 aaPredicted RBP12.07□□□□□ -0.48
SH3D19-209ENST00000514013 DPF2Q92785 391 aa12.07□□□□□ -0.48
SH3D19-209ENST00000514013 THUMPD2Q9BTF0 503 aaKnown RBP12.07□□□□□ -0.48
SH3D19-209ENST00000514013 DBNDD1Q9H9R9 158 aa12.07□□□□□ -0.48
SH3D19-209ENST00000514013 BBOX1O75936 387 aa12.06□□□□□ -0.48
SH3D19-209ENST00000514013 ECM2O94769 699 aaPredicted RBP12.06□□□□□ -0.48
SH3D19-209ENST00000514013 PROSER3Q2NL68 480 aa12.06□□□□□ -0.48
SH3D19-209ENST00000514013 ZNF428Q96B54 188 aa12.06□□□□□ -0.48
SH3D19-209ENST00000514013 CDCA5Q96FF9 252 aa12.06□□□□□ -0.48
SH3D19-209ENST00000514013 UTP14AQ9BVJ6 771 aaKnown RBP12.06□□□□□ -0.48
SH3D19-209ENST00000514013 TMX4Q9H1E5 349 aaPredicted RBP12.06□□□□□ -0.48
SH3D19-209ENST00000514013 GGA3Q9NZ52 723 aa12.06□□□□□ -0.48
SH3D19-209ENST00000514013 TBC1D8O95759 1140 aa12.05□□□□□ -0.48
SH3D19-209ENST00000514013 ANXA1P04083 346 aa12.05□□□□□ -0.48
SH3D19-209ENST00000514013 PDIA6Q15084 440 aa12.05□□□□□ -0.48
SH3D19-209ENST00000514013 PARP10Q53GL7 1025 aa12.05□□□□□ -0.48
SH3D19-209ENST00000514013 MOB2Q70IA6 237 aa12.05□□□□□ -0.48
SH3D19-209ENST00000514013 PPP1R42Q7Z4L9 355 aa12.05□□□□□ -0.48
SH3D19-209ENST00000514013 DCPSQ96C86 337 aaKnown RBP12.05□□□□□ -0.48
SH3D19-209ENST00000514013 HTATSF1O43719 755 aaKnown RBP12.04□□□□□ -0.48
SH3D19-209ENST00000514013 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
SH3D19-209ENST00000514013 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
SH3D19-209ENST00000514013 GRAPQ13588 217 aa12.04□□□□□ -0.48
SH3D19-209ENST00000514013 KIF4BQ2VIQ3 1234 aa12.04□□□□□ -0.48
SH3D19-209ENST00000514013 GRAPLQ8TC17 118 aaPredicted RBP12.04□□□□□ -0.48
SH3D19-209ENST00000514013 R3HDMLQ9H3Y0 253 aa12.04□□□□□ -0.48
SH3D19-209ENST00000514013 KDM3BQ7LBC6 1761 aa12.04□□□□□ -0.48
SH3D19-209ENST00000514013 LRRC37AA6NMS7 1700 aa12.03□□□□□ -0.48
SH3D19-209ENST00000514013 LAMB2P55268 1798 aa12.03□□□□□ -0.48
SH3D19-209ENST00000514013 NLRP10Q86W26 655 aa12.03□□□□□ -0.48
SH3D19-209ENST00000514013 CELF1Q92879 486 aaKnown RBP12.03□□□□□ -0.48
SH3D19-209ENST00000514013 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
SH3D19-209ENST00000514013 SCAF8Q9UPN6 1271 aaKnown RBP12.03□□□□□ -0.48
SH3D19-209ENST00000514013 ECE2O60344 883 aa12.02□□□□□ -0.49
SH3D19-209ENST00000514013 FXR1P51114 621 aaKnown RBP eCLIP12.02□□□□□ -0.49
SH3D19-209ENST00000514013 PKN2Q16513 984 aaKnown RBP12.02□□□□□ -0.49
SH3D19-209ENST00000514013 ANGEL2Q5VTE6 544 aaKnown RBP12.02□□□□□ -0.49
SH3D19-209ENST00000514013 FBXO46Q6PJ61 603 aaPredicted RBP12.02□□□□□ -0.49
SH3D19-209ENST00000514013 DDX46Q7L014 1031 aaKnown RBP12.02□□□□□ -0.49
SH3D19-209ENST00000514013 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
SH3D19-209ENST00000514013 GCC1Q96CN9 775 aa12.02□□□□□ -0.49
SH3D19-209ENST00000514013 HDAC9Q9UKV0 1011 aa12.02□□□□□ -0.49
SH3D19-209ENST00000514013 TAF1P21675 1872 aa12.02□□□□□ -0.49
SH3D19-209ENST00000514013 POLR2AP24928 1970 aaKnown RBP12.01□□□□□ -0.49
SH3D19-209ENST00000514013 TK2O00142 265 aa12.01□□□□□ -0.49
SH3D19-209ENST00000514013 GPR25O00155 361 aa12.01□□□□□ -0.49
SH3D19-209ENST00000514013 RPS12P25398 132 aaKnown RBP12.01□□□□□ -0.49
SH3D19-209ENST00000514013 GPSM2P81274 684 aa12.01□□□□□ -0.49
SH3D19-209ENST00000514013 WASHC4Q2M389 1173 aa12.01□□□□□ -0.49
SH3D19-209ENST00000514013 NSFL1CQ9UNZ2 370 aaKnown RBP12.01□□□□□ -0.49
SH3D19-209ENST00000514013 AKAP11Q9UKA4 1901 aa12.01□□□□□ -0.49
SH3D19-209ENST00000514013 SCN9AQ15858 1988 aa12□□□□□ -0.49
SH3D19-209ENST00000514013 UBE2Q2LH0YL09 131 aa12□□□□□ -0.49
SH3D19-209ENST00000514013 PPP1R37O75864 691 aa12□□□□□ -0.49
SH3D19-209ENST00000514013 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
SH3D19-209ENST00000514013 ERBB4Q15303 1308 aa12□□□□□ -0.49
SH3D19-209ENST00000514013 BRCA2P51587 3418 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 TRIOBPQ9H2D6 2365 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 VIL1P09327 827 aaKnown RBP11.99□□□□□ -0.49
SH3D19-209ENST00000514013 ZNF280AP59817 542 aaPredicted RBP11.99□□□□□ -0.49
SH3D19-209ENST00000514013 SCARF1Q14162 830 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 PTCD2Q8WV60 388 aaKnown RBP11.99□□□□□ -0.49
SH3D19-209ENST00000514013 CFAP53Q96M91 514 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 TRMT112Q9UI30 125 aaKnown RBP11.99□□□□□ -0.49
SH3D19-209ENST00000514013 NUDCQ9Y266 331 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 CLSPNQ9HAW4 1339 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 ANKRD36CQ5JPF3 1778 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 PAPPA2Q9BXP8 1791 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 CEP290O15078 2479 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 SZT2Q5T011 3432 aa11.99□□□□□ -0.49
SH3D19-209ENST00000514013 SH3TC1Q8TE82 1336 aa11.98□□□□□ -0.49
SH3D19-209ENST00000514013 C6orf229H3BNL8 230 aa11.98□□□□□ -0.49
SH3D19-209ENST00000514013 HRO43593 1189 aa11.98□□□□□ -0.49
SH3D19-209ENST00000514013 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
SH3D19-209ENST00000514013 PPP2R1AP30153 589 aa11.98□□□□□ -0.49
SH3D19-209ENST00000514013 PSEN2P49810 448 aa11.98□□□□□ -0.49
SH3D19-209ENST00000514013 TBC1D16Q8TBP0 767 aa11.98□□□□□ -0.49
SH3D19-209ENST00000514013 PNISRQ8TF01 805 aaKnown RBP11.98□□□□□ -0.49
SH3D19-209ENST00000514013 PCGF6Q9BYE7 350 aa11.98□□□□□ -0.49
SH3D19-209ENST00000514013 CENPFP49454 3210 aa11.98□□□□□ -0.49
SH3D19-209ENST00000514013 TM4SF4P48230 202 aa11.97□□□□□ -0.49
SH3D19-209ENST00000514013 FKBP1BP68106 108 aa11.97□□□□□ -0.49
SH3D19-209ENST00000514013 NOM1Q5C9Z4 860 aaKnown RBP11.97□□□□□ -0.49
SH3D19-209ENST00000514013 COPS6Q7L5N1 327 aa11.97□□□□□ -0.49
SH3D19-209ENST00000514013 TMC4Q7Z404 712 aa11.97□□□□□ -0.49
SH3D19-209ENST00000514013 XAGE3Q8WTP9 111 aa11.97□□□□□ -0.49
SH3D19-209ENST00000514013 ZNF609O15014 1411 aa11.96□□□□□ -0.49
SH3D19-209ENST00000514013 FKTNO75072 461 aa11.96□□□□□ -0.49
SH3D19-209ENST00000514013 AIMP1Q12904 312 aaKnown RBP11.96□□□□□ -0.49
SH3D19-209ENST00000514013 TCIRG1Q13488 830 aa11.96□□□□□ -0.49
SH3D19-209ENST00000514013 NECTIN2Q92692 538 aa11.96□□□□□ -0.49
SH3D19-209ENST00000514013 GMLQ99445 158 aa11.96□□□□□ -0.49
SH3D19-209ENST00000514013 KIAA0100Q14667 2235 aaKnown RBP11.96□□□□□ -0.49
SH3D19-209ENST00000514013 CUL9Q8IWT3 2517 aa11.95□□□□□ -0.5
SH3D19-209ENST00000514013 DDX60Q8IY21 1712 aaKnown RBP11.95□□□□□ -0.5
SH3D19-209ENST00000514013 RANBP2P49792 3224 aaKnown RBP11.95□□□□□ -0.5
SH3D19-209ENST00000514013 SF3B3Q15393 1217 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms