RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 PTPRCP08575 1304 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 SCN9AQ15858 1988 aa11.05□□□□□ -0.64
HERC4-214ENST00000513996 TAF5LO75529 589 aa11.04□□□□□ -0.64
HERC4-214ENST00000513996 RARSP54136 660 aaKnown RBP11.04□□□□□ -0.64
HERC4-214ENST00000513996 IFIT5Q13325 482 aaKnown RBP11.04□□□□□ -0.64
HERC4-214ENST00000513996 JMYQ8N9B5 988 aa11.04□□□□□ -0.64
HERC4-214ENST00000513996 CREBZFQ9NS37 354 aa11.04□□□□□ -0.64
HERC4-214ENST00000513996 NOB1Q9ULX3 412 aaKnown RBP11.04□□□□□ -0.64
HERC4-214ENST00000513996 CHMP3Q9Y3E7 222 aa11.04□□□□□ -0.64
HERC4-214ENST00000513996 G3V3G9 751 aa11.03□□□□□ -0.64
HERC4-214ENST00000513996 TRAF5O00463 557 aa11.03□□□□□ -0.64
HERC4-214ENST00000513996 CT47B1P0C2W7 299 aaPredicted RBP11.03□□□□□ -0.64
HERC4-214ENST00000513996 BRPF1P55201 1214 aaPredicted RBP11.03□□□□□ -0.64
HERC4-214ENST00000513996 DCAF8Q5TAQ9 597 aa11.03□□□□□ -0.64
HERC4-214ENST00000513996 DLK2Q6UY11 383 aa11.03□□□□□ -0.64
HERC4-214ENST00000513996 ANKRD44Q8N8A2 993 aa11.03□□□□□ -0.64
HERC4-214ENST00000513996 GMLQ99445 158 aa11.03□□□□□ -0.64
HERC4-214ENST00000513996 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
HERC4-214ENST00000513996 ANKRD2Q9GZV1 360 aa11.03□□□□□ -0.64
HERC4-214ENST00000513996 LEMD3Q9Y2U8 911 aa11.03□□□□□ -0.64
HERC4-214ENST00000513996 ZNF804BA4D1E1 1349 aa11.03□□□□□ -0.64
HERC4-214ENST00000513996 IRS2Q9Y4H2 1338 aa11.03□□□□□ -0.64
HERC4-214ENST00000513996 TMEM88BA6NKF7 163 aa11.02□□□□□ -0.65
HERC4-214ENST00000513996 H7C1D1 291 aa11.02□□□□□ -0.65
HERC4-214ENST00000513996 RPS12P25398 132 aaKnown RBP11.02□□□□□ -0.65
HERC4-214ENST00000513996 CCDC57Q2TAC2 916 aa11.02□□□□□ -0.65
HERC4-214ENST00000513996 RABL6Q3YEC7 729 aaPredicted RBP11.02□□□□□ -0.65
HERC4-214ENST00000513996 TBC1D10BQ4KMP7 808 aaPredicted RBP11.02□□□□□ -0.65
HERC4-214ENST00000513996 RBM26Q5T8P6 1007 aaKnown RBP11.02□□□□□ -0.65
HERC4-214ENST00000513996 CST9Q5W186 159 aa11.02□□□□□ -0.65
HERC4-214ENST00000513996 RSBN1LQ6PCB5 846 aaPredicted RBP11.02□□□□□ -0.65
HERC4-214ENST00000513996 PODNQ7Z5L7 613 aa11.02□□□□□ -0.65
HERC4-214ENST00000513996 MXD3Q9BW11 206 aa11.02□□□□□ -0.65
HERC4-214ENST00000513996 GLIS2Q9BZE0 524 aaPredicted RBP11.02□□□□□ -0.65
HERC4-214ENST00000513996 BICC1Q9H694 974 aaKnown RBP11.02□□□□□ -0.65
HERC4-214ENST00000513996 MKRN1Q9UHC7 482 aaKnown RBP11.02□□□□□ -0.65
HERC4-214ENST00000513996 MED23Q9ULK4 1368 aa11.02□□□□□ -0.65
HERC4-214ENST00000513996 SPEF2Q9C093 1822 aa11.01□□□□□ -0.65
HERC4-214ENST00000513996 USP17L3A6NCW0 530 aa11.01□□□□□ -0.65
HERC4-214ENST00000513996 USP17L4A6NCW7 530 aa11.01□□□□□ -0.65
HERC4-214ENST00000513996 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.65
HERC4-214ENST00000513996 HNRNPUQ00839 825 aaKnown RBP eCLIP11.01□□□□□ -0.65
HERC4-214ENST00000513996 LDHAL6AQ6ZMR3 332 aa11.01□□□□□ -0.65
HERC4-214ENST00000513996 USP17L1Q7RTZ2 530 aa11.01□□□□□ -0.65
HERC4-214ENST00000513996 ZC3H15Q8WU90 426 aaKnown RBP11.01□□□□□ -0.65
HERC4-214ENST00000513996 TNNQ9UQP3 1299 aa11.01□□□□□ -0.65
HERC4-214ENST00000513996 RIPOR2Q9Y4F9 1068 aa11.01□□□□□ -0.65
HERC4-214ENST00000513996 ASTN2O75129 1339 aaPredicted RBP11.01□□□□□ -0.65
HERC4-214ENST00000513996 PLIN1O60240 522 aa11□□□□□ -0.65
HERC4-214ENST00000513996 BCAR3O75815 825 aa11□□□□□ -0.65
HERC4-214ENST00000513996 ZNF280AP59817 542 aaPredicted RBP11□□□□□ -0.65
HERC4-214ENST00000513996 DACT2Q5SW24 774 aa11□□□□□ -0.65
HERC4-214ENST00000513996 C15orf52Q6ZUT6 534 aaKnown RBP11□□□□□ -0.65
HERC4-214ENST00000513996 USP48Q86UV5 1035 aa11□□□□□ -0.65
HERC4-214ENST00000513996 AGBL3Q8NEM8 1001 aa11□□□□□ -0.65
HERC4-214ENST00000513996 KLHDC4Q8TBB5 520 aa11□□□□□ -0.65
HERC4-214ENST00000513996 COA1Q9GZY4 146 aa11□□□□□ -0.65
HERC4-214ENST00000513996 CD209Q9NNX6 404 aa11□□□□□ -0.65
HERC4-214ENST00000513996 KCNJ4P48050 445 aa10.99□□□□□ -0.65
HERC4-214ENST00000513996 LRRC24Q50LG9 513 aa10.99□□□□□ -0.65
HERC4-214ENST00000513996 TAF7LQ5H9L4 462 aa10.99□□□□□ -0.65
HERC4-214ENST00000513996 CNNM1Q9NRU3 951 aa10.99□□□□□ -0.65
HERC4-214ENST00000513996 CNTNAP1P78357 1384 aa10.99□□□□□ -0.65
HERC4-214ENST00000513996 USP17L8P0C7I0 530 aa10.98□□□□□ -0.65
HERC4-214ENST00000513996 RFX5P48382 616 aaPredicted RBP10.98□□□□□ -0.65
HERC4-214ENST00000513996 VEGFBP49765 207 aa10.98□□□□□ -0.65
HERC4-214ENST00000513996 GTF2IP78347 998 aa10.98□□□□□ -0.65
HERC4-214ENST00000513996 KIF4BQ2VIQ3 1234 aa10.98□□□□□ -0.65
HERC4-214ENST00000513996 STRIP1Q5VSL9 837 aa10.98□□□□□ -0.65
HERC4-214ENST00000513996 TTLL5Q6EMB2 1281 aa10.98□□□□□ -0.65
HERC4-214ENST00000513996 CDC37L1Q7L3B6 337 aa10.98□□□□□ -0.65
HERC4-214ENST00000513996 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
HERC4-214ENST00000513996 API5Q9BZZ5 524 aaKnown RBP10.98□□□□□ -0.65
HERC4-214ENST00000513996 RASSF10A6NK89 507 aa10.97□□□□□ -0.65
HERC4-214ENST00000513996 CELF2O95319 508 aaKnown RBP10.97□□□□□ -0.65
HERC4-214ENST00000513996 SCARF1Q14162 830 aa10.97□□□□□ -0.65
HERC4-214ENST00000513996 DEFB115Q30KQ5 88 aa10.97□□□□□ -0.65
HERC4-214ENST00000513996 CERS5Q8N5B7 392 aa10.97□□□□□ -0.65
HERC4-214ENST00000513996 ARHGAP45Q92619 1136 aa10.97□□□□□ -0.65
HERC4-214ENST00000513996 FBXW7Q969H0 707 aa10.97□□□□□ -0.65
HERC4-214ENST00000513996 ZNF609O15014 1411 aa10.97□□□□□ -0.65
HERC4-214ENST00000513996 POLR2AP24928 1970 aaKnown RBP10.97□□□□□ -0.65
HERC4-214ENST00000513996 ADM5C9JUS6 153 aa10.96□□□□□ -0.65
HERC4-214ENST00000513996 TRIM27P14373 513 aa10.96□□□□□ -0.65
HERC4-214ENST00000513996 IL1R1P14778 569 aa10.96□□□□□ -0.65
HERC4-214ENST00000513996 GYG1P46976 350 aa10.96□□□□□ -0.65
HERC4-214ENST00000513996 PTPN12Q05209 780 aaKnown RBP10.96□□□□□ -0.65
HERC4-214ENST00000513996 UBE4AQ14139 1066 aa10.96□□□□□ -0.65
HERC4-214ENST00000513996 INTS3Q68E01 1043 aaKnown RBP10.96□□□□□ -0.65
HERC4-214ENST00000513996 KRT26Q7Z3Y9 468 aa10.96□□□□□ -0.65
HERC4-214ENST00000513996 VGLL2Q8N8G2 317 aa10.96□□□□□ -0.65
HERC4-214ENST00000513996 FAM84BQ96KN1 310 aaPredicted RBP10.96□□□□□ -0.65
HERC4-214ENST00000513996 MEIS3Q99687 375 aa10.96□□□□□ -0.65
HERC4-214ENST00000513996 MYOZ2Q9NPC6 264 aa10.96□□□□□ -0.65
HERC4-214ENST00000513996 SCAF8Q9UPN6 1271 aaKnown RBP10.96□□□□□ -0.65
HERC4-214ENST00000513996 UBTFL1P0CB47 393 aaPredicted RBP10.95□□□□□ -0.66
HERC4-214ENST00000513996 HSPA1AP0DMV8 641 aaKnown RBP10.95□□□□□ -0.66
HERC4-214ENST00000513996 HSPA1BP0DMV9 641 aaKnown RBP10.95□□□□□ -0.66
HERC4-214ENST00000513996 VASPP50552 380 aaPredicted RBP10.95□□□□□ -0.66
HERC4-214ENST00000513996 NBPF9Q3BBW0 867 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 431.6 ms