RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 EIF4G1Q04637 1599 aaKnown RBP4.59□□□□□ -1.67
AFP-205ENST00000513720 IKQ13123 557 aaPredicted RBP4.59□□□□□ -1.67
AFP-205ENST00000513720 STK3Q13188 491 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 KANK1Q14678 1352 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 NOLC1Q14978 699 aaKnown RBP eCLIP4.59□□□□□ -1.671e-64■■■□□ 16.7
AFP-205ENST00000513720 SART3Q15020 963 aaKnown RBP4.59□□□□□ -1.67
AFP-205ENST00000513720 TERF2Q15554 542 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 ATP2B3Q16720 1220 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 GNPTABQ3T906 1256 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 CCDC122Q5T0U0 273 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 SFMBT2Q5VUG0 894 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 CEP135Q66GS9 1140 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 CCDC186Q7Z3E2 898 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 AKNAQ7Z591 1439 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 TEX11Q8IYF3 940 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.59□□□□□ -1.67
AFP-205ENST00000513720 SLC43A3Q8NBI5 491 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 GSDMBQ8TAX9 411 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 SH3TC2Q8TF17 1288 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 ANKRD49Q8WVL7 239 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 STAG1Q8WVM7 1258 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 TEKT4Q8WW24 435 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 ZNF496Q96IT1 587 aaPredicted RBP4.59□□□□□ -1.67
AFP-205ENST00000513720 TRERF1Q96PN7 1200 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 SLC7A5P2Q9GIP4 190 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 AVENQ9NQS1 362 aaPredicted RBP4.59□□□□□ -1.67
AFP-205ENST00000513720 PRKAG2Q9UGJ0 569 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 DMGDHQ9UI17 866 aaKnown RBP4.59□□□□□ -1.67
AFP-205ENST00000513720 INTUQ9ULD6 942 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 PPP1R9AQ9ULJ8 1098 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 PRKAB1Q9Y478 270 aa4.59□□□□□ -1.67
AFP-205ENST00000513720 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 TMEM238LA0A1B0GVL6 79 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 FAM170AA1A519 330 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 IQCA1LA6NCM1 817 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 FOXN3O00409 490 aaPredicted RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 MYL3P08590 195 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 RPSAP08865 295 aaKnown RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 FERP16591 822 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 CYP11B2P19099 503 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 ENPP1P22413 925 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 PSMA3P25788 255 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 PSMD7P51665 324 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 NEK2P51955 445 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 GEMIN4P57678 1058 aaKnown RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 SMC1AQ14683 1233 aaKnown RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 ARHGEF6Q15052 776 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 RCN1Q15293 331 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 SF3B3Q15393 1217 aaKnown RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 ZRSR1Q15695 479 aaKnown RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 PKN1Q16512 942 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 TBC1D25Q3MII6 688 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.58□□□□□ -1.685e-32■■■□□ 19.1
AFP-205ENST00000513720 FAM133BQ5BKY9 247 aaKnown RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 MUM1L1Q5H9M0 696 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 C9orf131Q5VYM1 1079 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 NAA16Q6N069 864 aaPredicted RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 PDXDC1Q6P996 788 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 ZNF449Q6P9G9 518 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 PACS1Q6VY07 963 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 MMS22LQ6ZRQ5 1243 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 SRLQ86TD4 932 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 PARP9Q8IXQ6 854 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 C10orf67Q8IYJ2 551 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 DCLK2Q8N568 766 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 MSANTD4Q8NCY6 345 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 ERMNQ8TAM6 284 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 GOLGA5Q8TBA6 731 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 SUN5Q8TC36 379 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 KIAA1524Q8TCG1 905 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 TCP11Q8WWU5 503 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 TRIM52Q96A61 297 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 TMEM87BQ96K49 555 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 C8orf48Q96LL4 319 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 SRRTQ9BXP5 876 aaKnown RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 CAPS2Q9BXY5 557 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 ABCG4Q9H172 646 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 CCDC68Q9H2F9 335 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 TSPYL2Q9H2G4 693 aaPredicted RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 GRPEL1Q9HAV7 217 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 TMEM165Q9HC07 324 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 LUC7LQ9NQ29 371 aaKnown RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 TUBA8Q9NY65 449 aaPredicted RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 CLIC5Q9NZA1 410 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 TFIP11Q9UBB9 837 aaKnown RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 DKK3Q9UBP4 350 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 FBXL5Q9UKA1 691 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 GTF3C4Q9UKN8 822 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 ITGB1BP2Q9UKP3 347 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 TTF2Q9UNY4 1162 aaKnown RBP4.58□□□□□ -1.68
AFP-205ENST00000513720 TRIM17Q9Y577 477 aa4.58□□□□□ -1.68
AFP-205ENST00000513720 SCRIBQ14160 1630 aa4.57□□□□□ -1.68
AFP-205ENST00000513720 SPAG9O60271 1321 aaKnown RBP4.57□□□□□ -1.68
AFP-205ENST00000513720 TBKBP1A7MCY6 615 aa4.57□□□□□ -1.68
AFP-205ENST00000513720 H0YC42 278 aa4.57□□□□□ -1.68
AFP-205ENST00000513720 ZSCAN9O15535 394 aaPredicted RBP4.57□□□□□ -1.68
AFP-205ENST00000513720 BPNT1O95861 308 aa4.57□□□□□ -1.68
AFP-205ENST00000513720 RECKO95980 971 aa4.57□□□□□ -1.68
AFP-205ENST00000513720 MYL1P05976 194 aa4.57□□□□□ -1.68
AFP-205ENST00000513720 PDGFRBP09619 1106 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms