RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 CAPNS2Q96L46 248 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 GLIS2Q9BZE0 524 aaPredicted RBP9.24□□□□□ -0.93
HTT-212ENST00000513639 SRCIN1Q9C0H9 1055 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 PRDM10Q9NQV6 1147 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 ZNF804BA4D1E1 1349 aa9.24□□□□□ -0.93
HTT-212ENST00000513639 F6X3S4 739 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 GRM8O00222 908 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 FOXO4P98177 505 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 FMR1Q06787 632 aaKnown RBP eCLIP9.23□□□□□ -0.93
HTT-212ENST00000513639 SCARF1Q14162 830 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 KIF4BQ2VIQ3 1234 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 TAF7LQ5H9L4 462 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 STRIP1Q5VSL9 837 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 TTLL5Q6EMB2 1281 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 GMLQ99445 158 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 ZNF408Q9H9D4 720 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 CHMP3Q9Y3E7 222 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 MYO3BQ8WXR4 1341 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 MED23Q9ULK4 1368 aa9.23□□□□□ -0.93
HTT-212ENST00000513639 SHTN1A0MZ66 631 aa9.22□□□□□ -0.93
HTT-212ENST00000513639 CA12O43570 354 aa9.22□□□□□ -0.93
HTT-212ENST00000513639 FAM161AQ3B820 660 aa9.22□□□□□ -0.93
HTT-212ENST00000513639 CYP4F22Q6NT55 531 aa9.22□□□□□ -0.93
HTT-212ENST00000513639 LMBR1LQ6UX01 489 aa9.22□□□□□ -0.93
HTT-212ENST00000513639 LDHAL6AQ6ZMR3 332 aa9.22□□□□□ -0.93
HTT-212ENST00000513639 CCDC102AQ96A19 550 aa9.22□□□□□ -0.93
HTT-212ENST00000513639 MYOZ2Q9NPC6 264 aa9.22□□□□□ -0.93
HTT-212ENST00000513639 HDAC9Q9UKV0 1011 aa9.22□□□□□ -0.93
HTT-212ENST00000513639 ZNF521Q96K83 1311 aa9.22□□□□□ -0.93
HTT-212ENST00000513639 CCER2I3L3R5 266 aa9.21□□□□□ -0.94
HTT-212ENST00000513639 FOXN1O15353 648 aa9.21□□□□□ -0.94
HTT-212ENST00000513639 HUNKP57058 714 aa9.21□□□□□ -0.94
HTT-212ENST00000513639 CHRNDQ07001 517 aa9.21□□□□□ -0.94
HTT-212ENST00000513639 SLFN5Q08AF3 891 aa9.21□□□□□ -0.94
HTT-212ENST00000513639 GRM1Q13255 1194 aa9.21□□□□□ -0.94
HTT-212ENST00000513639 DACT2Q5SW24 774 aa9.21□□□□□ -0.94
HTT-212ENST00000513639 C15orf52Q6ZUT6 534 aaKnown RBP9.21□□□□□ -0.94
HTT-212ENST00000513639 DDX60Q8IY21 1712 aaKnown RBP9.21□□□□□ -0.94
HTT-212ENST00000513639 PTPRCP08575 1304 aa9.21□□□□□ -0.94
HTT-212ENST00000513639 LAMB2P55268 1798 aa9.21□□□□□ -0.94
HTT-212ENST00000513639 TAF1P21675 1872 aa9.21□□□□□ -0.94
HTT-212ENST00000513639 ADAMTSL1Q8N6G6 1762 aa9.2□□□□□ -0.94
HTT-212ENST00000513639 WTIPA6NIX2 430 aaPredicted RBP9.2□□□□□ -0.94
HTT-212ENST00000513639 EGFRP00533 1210 aa9.2□□□□□ -0.94
HTT-212ENST00000513639 CT47B1P0C2W7 299 aaPredicted RBP9.2□□□□□ -0.94
HTT-212ENST00000513639 FKBP1BP68106 108 aa9.2□□□□□ -0.94
HTT-212ENST00000513639 NOGQ13253 232 aa9.2□□□□□ -0.94
HTT-212ENST00000513639 ALDH1L2Q3SY69 923 aa9.2□□□□□ -0.94
HTT-212ENST00000513639 ZNF804AQ7Z570 1209 aa9.2□□□□□ -0.94
HTT-212ENST00000513639 REM2Q8IYK8 340 aaPredicted RBP9.2□□□□□ -0.94
HTT-212ENST00000513639 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
HTT-212ENST00000513639 FBXW7Q969H0 707 aa9.2□□□□□ -0.94
HTT-212ENST00000513639 GBA2Q9HCG7 927 aaPredicted RBP9.2□□□□□ -0.94
HTT-212ENST00000513639 CNNM1Q9NRU3 951 aa9.2□□□□□ -0.94
HTT-212ENST00000513639 HDAC5Q9UQL6 1122 aa9.2□□□□□ -0.94
HTT-212ENST00000513639 PITPNM2Q9BZ72 1349 aa9.2□□□□□ -0.94
HTT-212ENST00000513639 CACNA1FO60840 1977 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 TAF5LO75529 589 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 LBX1P52954 281 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 BRPF1P55201 1214 aaPredicted RBP9.19□□□□□ -0.94
HTT-212ENST00000513639 GTF2IP78347 998 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 UBE4AQ14139 1066 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 ANGEL2Q5VTE6 544 aaKnown RBP9.19□□□□□ -0.94
HTT-212ENST00000513639 RGMBQ6NW40 437 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 TXNRD3Q86VQ6 643 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 HELBQ8NG08 1087 aaPredicted RBP9.19□□□□□ -0.94
HTT-212ENST00000513639 CD209Q9NNX6 404 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 GGA3Q9NZ52 723 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 ZNF609O15014 1411 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 DUOX1Q9NRD9 1551 aa9.19□□□□□ -0.94
HTT-212ENST00000513639 SPDYE4A6NLX3 237 aa9.18□□□□□ -0.94
HTT-212ENST00000513639 LRRC37AA6NMS7 1700 aa9.18□□□□□ -0.94
HTT-212ENST00000513639 UTYO14607 1347 aa9.18□□□□□ -0.94
HTT-212ENST00000513639 PLIN1O60240 522 aa9.18□□□□□ -0.94
HTT-212ENST00000513639 SASH1O94885 1247 aa9.18□□□□□ -0.94
HTT-212ENST00000513639 IL1R1P14778 569 aa9.18□□□□□ -0.94
HTT-212ENST00000513639 NF2P35240 595 aa9.18□□□□□ -0.94
HTT-212ENST00000513639 ZNF157P51786 506 aaPredicted RBP9.18□□□□□ -0.94
HTT-212ENST00000513639 FKBP1AP62942 108 aaKnown RBP9.18□□□□□ -0.94
HTT-212ENST00000513639 LTBP1Q14766 1721 aa9.18□□□□□ -0.94
HTT-212ENST00000513639 EPHA10Q5JZY3 1008 aa9.18□□□□□ -0.94
HTT-212ENST00000513639 TRMT2AQ8IZ69 625 aaKnown RBP9.18□□□□□ -0.94
HTT-212ENST00000513639 SSH1Q8WYL5 1049 aa9.18□□□□□ -0.94
HTT-212ENST00000513639 MROH5Q6ZUA9 1318 aa9.17□□□□□ -0.94
HTT-212ENST00000513639 ADM5C9JUS6 153 aa9.17□□□□□ -0.94
HTT-212ENST00000513639 WNT10BO00744 389 aa9.17□□□□□ -0.94
HTT-212ENST00000513639 MYO1BO43795 1136 aa9.17□□□□□ -0.94
HTT-212ENST00000513639 AOC2O75106 756 aa9.17□□□□□ -0.94
HTT-212ENST00000513639 NBPF7P0C2Y1 421 aaPredicted RBP9.17□□□□□ -0.94
HTT-212ENST00000513639 HIBADHP31937 336 aaKnown RBP9.17□□□□□ -0.94
HTT-212ENST00000513639 DLGAP5Q15398 846 aa9.17□□□□□ -0.94
HTT-212ENST00000513639 NBPF9Q3BBW0 867 aa9.17□□□□□ -0.94
HTT-212ENST00000513639 CDCA5Q96FF9 252 aa9.17□□□□□ -0.94
HTT-212ENST00000513639 ZNF594Q96JF6 807 aaPredicted RBP9.17□□□□□ -0.94
HTT-212ENST00000513639 ABCB7O75027 752 aa9.16□□□□□ -0.94
HTT-212ENST00000513639 HSPA8P11142 646 aaKnown RBP9.16□□□□□ -0.94
HTT-212ENST00000513639 RABL6Q3YEC7 729 aaPredicted RBP9.16□□□□□ -0.94
HTT-212ENST00000513639 CAVIN4Q5BKX8 364 aa9.16□□□□□ -0.94
HTT-212ENST00000513639 DLK2Q6UY11 383 aa9.16□□□□□ -0.94
HTT-212ENST00000513639 VPS37DQ86XT2 251 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms