RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 USTQ9Y2C2 406 aa6.84□□□□□ -1.31
HTT-211ENST00000513326 C4AP0C0L4 1744 aa6.84□□□□□ -1.31
HTT-211ENST00000513326 EDC4Q6P2E9 1401 aaKnown RBP6.84□□□□□ -1.32
HTT-211ENST00000513326 ARFGEF1Q9Y6D6 1849 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 FOXN1O15353 648 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 SSFA2P28290 1259 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
HTT-211ENST00000513326 TSGA10IPQ3SY00 556 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 VASH1Q7L8A9 365 aaPredicted RBP6.83□□□□□ -1.32
HTT-211ENST00000513326 MPNDQ8N594 471 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 SMC1BQ8NDV3 1235 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 TMC1Q8TDI8 760 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 EMID1Q96A84 441 aaPredicted RBP6.83□□□□□ -1.32
HTT-211ENST00000513326 CCDC85AQ96PX6 553 aaPredicted RBP6.83□□□□□ -1.32
HTT-211ENST00000513326 CDK15Q96Q40 435 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 PLA2G2EQ9NZK7 142 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 ASAP1Q9ULH1 1129 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 SBF1O95248 1867 aa6.83□□□□□ -1.32
HTT-211ENST00000513326 PLEKHG2Q9H7P9 1386 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 LOC102724428A0A0B4J2F2 783 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 FAM196BA6NMK8 535 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 WNT7AO00755 349 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 CHRNA5P30532 468 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 AMPHP49418 695 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 SIK1P57059 783 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 TGFB2P61812 414 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 TRIM50Q86XT4 487 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 L3MBTL2Q969R5 705 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 DCAF5Q96JK2 942 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 SLC4A9Q96Q91 983 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 NOD1Q9Y239 953 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 ROCK2O75116 1388 aaKnown RBP6.82□□□□□ -1.32
HTT-211ENST00000513326 KDRP35968 1356 aa6.82□□□□□ -1.32
HTT-211ENST00000513326 KDM2BQ8NHM5 1336 aa6.81□□□□□ -1.32
HTT-211ENST00000513326 PCDH11XQ9BZA7 1347 aa6.81□□□□□ -1.32
HTT-211ENST00000513326 PCDH11YQ9BZA8 1340 aa6.81□□□□□ -1.32
HTT-211ENST00000513326 RASA1P20936 1047 aa6.81□□□□□ -1.32
HTT-211ENST00000513326 ATP1A2P50993 1020 aa6.81□□□□□ -1.32
HTT-211ENST00000513326 DDR1Q08345 913 aa6.81□□□□□ -1.32
HTT-211ENST00000513326 USP4Q13107 963 aa6.81□□□□□ -1.32
HTT-211ENST00000513326 ARID5BQ14865 1188 aa6.81□□□□□ -1.32
HTT-211ENST00000513326 OXLD1Q5BKU9 147 aa6.81□□□□□ -1.32
HTT-211ENST00000513326 PCDHB11Q9Y5F2 797 aa6.81□□□□□ -1.32
HTT-211ENST00000513326 POTECB2RU33 542 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L15C9J2P7 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L10C9JJH3 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L13C9JLJ4 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L12C9JPN9 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L11C9JVI0 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L21D6R901 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L18D6R9N7 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L22D6RA61 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L17D6RBQ6 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L19D6RCP7 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L20D6RJB6 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 KDM6AO15550 1401 aaPredicted RBP6.8□□□□□ -1.32
HTT-211ENST00000513326 SIAH2O43255 324 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 GYS1P13807 737 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 USP17L24Q0WX57 530 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 HSP90AB2PQ58FF8 381 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 INTS6LQ5JSJ4 861 aaKnown RBP6.8□□□□□ -1.32
HTT-211ENST00000513326 SPRYD7Q5W111 196 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 TIAM2Q8IVF5 1701 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 KCTD17Q8N5Z5 321 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 RAPGEF4Q8WZA2 1011 aa6.8□□□□□ -1.32
HTT-211ENST00000513326 SRP68Q9UHB9 627 aaKnown RBP6.8□□□□□ -1.32
HTT-211ENST00000513326 NOVA2Q9UNW9 492 aaKnown RBP6.8□□□□□ -1.32
HTT-211ENST00000513326 MYH14Q7Z406 1995 aaKnown RBP6.8□□□□□ -1.32
HTT-211ENST00000513326 TATP17735 454 aaPredicted RBP6.79□□□□□ -1.32
HTT-211ENST00000513326 GRM5P41594 1212 aa6.79□□□□□ -1.32
HTT-211ENST00000513326 RAB15P59190 212 aa6.79□□□□□ -1.32
HTT-211ENST00000513326 TMF1P82094 1093 aa6.79□□□□□ -1.32
HTT-211ENST00000513326 PTK7Q13308 1070 aa6.79□□□□□ -1.32
HTT-211ENST00000513326 CRTC2Q53ET0 693 aaPredicted RBP6.79□□□□□ -1.32
HTT-211ENST00000513326 DALRD3Q5D0E6 543 aaKnown RBP6.79□□□□□ -1.32
HTT-211ENST00000513326 HDGFL2Q7Z4V5 671 aaPredicted RBP6.79□□□□□ -1.32
HTT-211ENST00000513326 LARGE2Q8N3Y3 721 aa6.79□□□□□ -1.32
HTT-211ENST00000513326 OGFOD1Q8N543 542 aa6.79□□□□□ -1.32
HTT-211ENST00000513326 SMARCC1Q92922 1105 aaPredicted RBP6.79□□□□□ -1.32
HTT-211ENST00000513326 MRGPRX2Q96LB1 330 aa6.79□□□□□ -1.32
HTT-211ENST00000513326 ATG3Q9NT62 314 aa6.79□□□□□ -1.32
HTT-211ENST00000513326 DNAAF2Q9NVR5 837 aaKnown RBP6.79□□□□□ -1.32
HTT-211ENST00000513326 RTL1A6NKG5 1358 aa6.79□□□□□ -1.32
HTT-211ENST00000513326 COL5A3P25940 1745 aaPredicted RBP6.79□□□□□ -1.32
HTT-211ENST00000513326 TMEM88BA6NKF7 163 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 ERVH48-1M5A8F1 160 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 ADH1CP00326 375 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 MYCP01106 439 aaPredicted RBP6.78□□□□□ -1.32
HTT-211ENST00000513326 FSHRP23945 695 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 CLDN10P78369 228 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 DHX9Q08211 1270 aaKnown RBP6.78□□□□□ -1.32
HTT-211ENST00000513326 NR5A1Q13285 461 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 ZNF598Q86UK7 904 aaKnown RBP6.78□□□□□ -1.32
HTT-211ENST00000513326 FAM200AQ8TCP9 573 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 COG3Q96JB2 828 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 SIN3AQ96ST3 1273 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 CCDC87Q9NVE4 849 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 PIM2Q9P1W9 311 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 ZMIZ1Q9ULJ6 1067 aa6.78□□□□□ -1.32
HTT-211ENST00000513326 TLL2Q9Y6L7 1015 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms