RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 VSIG8P0DPA2 414 aa6.7□□□□□ -1.34
HTT-210ENST00000512909 HOXD8P13378 290 aaPredicted RBP6.7□□□□□ -1.34
HTT-210ENST00000512909 NFX1Q12986 1120 aaKnown RBP6.7□□□□□ -1.34
HTT-210ENST00000512909 PSAPL1Q6NUJ1 521 aa6.7□□□□□ -1.34
HTT-210ENST00000512909 CACTIN-AS1Q8N1I8 211 aa6.7□□□□□ -1.34
HTT-210ENST00000512909 CRELD1Q96HD1 420 aa6.7□□□□□ -1.34
HTT-210ENST00000512909 ZKSCAN3Q9BRR0 538 aa6.7□□□□□ -1.34
HTT-210ENST00000512909 RASSF4Q9H2L5 321 aa6.7□□□□□ -1.34
HTT-210ENST00000512909 LATS2Q9NRM7 1088 aa6.7□□□□□ -1.34
HTT-210ENST00000512909 ADARB2-AS1A8MUL3 147 aa6.69□□□□□ -1.34
HTT-210ENST00000512909 TCF3P15923 654 aa6.69□□□□□ -1.34
HTT-210ENST00000512909 ARL4DP49703 201 aa6.69□□□□□ -1.34
HTT-210ENST00000512909 GRM2Q14416 872 aa6.69□□□□□ -1.34
HTT-210ENST00000512909 GDF6Q6KF10 455 aaPredicted RBP6.69□□□□□ -1.34
HTT-210ENST00000512909 SLCO4C1Q6ZQN7 724 aa6.69□□□□□ -1.34
HTT-210ENST00000512909 GALNT6Q8NCL4 622 aa6.69□□□□□ -1.34
HTT-210ENST00000512909 NEDD1Q8NHV4 660 aa6.69□□□□□ -1.34
HTT-210ENST00000512909 NUDT8Q8WV74 236 aa6.69□□□□□ -1.34
HTT-210ENST00000512909 EDARADDQ8WWZ3 215 aa6.69□□□□□ -1.34
HTT-210ENST00000512909 RRAGCQ9HB90 399 aa6.69□□□□□ -1.34
HTT-210ENST00000512909 JPH1Q9HDC5 661 aaPredicted RBP6.69□□□□□ -1.34
HTT-210ENST00000512909 GPN3Q9UHW5 284 aaPredicted RBP6.69□□□□□ -1.34
HTT-210ENST00000512909 TMEM238LA0A1B0GVL6 79 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 ZNF76P36508 570 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 ATP11AP98196 1134 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 HNRNPUQ00839 825 aaKnown RBP eCLIP6.68□□□□□ -1.34
HTT-210ENST00000512909 TAF1CQ15572 869 aaPredicted RBP6.68□□□□□ -1.34
HTT-210ENST00000512909 COL13A1Q5TAT6 717 aaPredicted RBP6.68□□□□□ -1.34
HTT-210ENST00000512909 KANK3Q6NY19 840 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 CEP120Q8N960 986 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 TMEM102Q8N9M5 508 aaPredicted RBP6.68□□□□□ -1.34
HTT-210ENST00000512909 RNF34Q969K3 372 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 BACH2Q9BYV9 841 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 CEP44Q9C0F1 390 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 LACRTQ9GZZ8 138 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 DZANK1Q9NVP4 752 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 FRRS1LQ9P0K9 344 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 STK17AQ9UEE5 414 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 SAMM50Q9Y512 469 aa6.68□□□□□ -1.34
HTT-210ENST00000512909 A0A096LPE4 126 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 A0A1W2PPZ6 126 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 ZBTB42B2RXF5 422 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 LILRB5O75023 590 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 TRPA1O75762 1119 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 CDC27P30260 824 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 PPP2R3AQ06190 1150 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 RNFT1Q5M7Z0 435 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 PERM1Q5SV97 790 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 OSBPL7Q9BZF2 842 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 KIAA1522Q9P206 1035 aaPredicted RBP6.67□□□□□ -1.34
HTT-210ENST00000512909 ERBB4Q15303 1308 aa6.67□□□□□ -1.34
HTT-210ENST00000512909 PIK3R2O00459 728 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
HTT-210ENST00000512909 BCRP11274 1271 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 EPXP11678 715 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 ACPPP15309 386 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 MRPL58Q14197 206 aaKnown RBP6.66□□□□□ -1.34
HTT-210ENST00000512909 PEAR1Q5VY43 1037 aaPredicted RBP6.66□□□□□ -1.34
HTT-210ENST00000512909 PRPF40BQ6NWY9 871 aaKnown RBP6.66□□□□□ -1.34
HTT-210ENST00000512909 HS2ST1Q7LGA3 356 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 FCHSD1Q86WN1 690 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 CCNJLQ8IV13 435 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 BSNDQ8WZ55 320 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 NXPE3Q969Y0 559 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 MUC3BQ9H195 1237 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 METTL5Q9NRN9 209 aaKnown RBP6.66□□□□□ -1.34
HTT-210ENST00000512909 RNF19AQ9NV58 838 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 PPM1HQ9ULR3 514 aa6.66□□□□□ -1.34
HTT-210ENST00000512909 RLBP1P12271 317 aa6.65□□□□□ -1.34
HTT-210ENST00000512909 ERCC5P28715 1186 aaPredicted RBP6.65□□□□□ -1.34
HTT-210ENST00000512909 CDC25BP30305 580 aa6.65□□□□□ -1.34
HTT-210ENST00000512909 INSM1Q01101 510 aaPredicted RBP6.65□□□□□ -1.34
HTT-210ENST00000512909 CCDC85BQ15834 202 aaPredicted RBP6.65□□□□□ -1.34
HTT-210ENST00000512909 WFDC8Q8IUA0 241 aa6.65□□□□□ -1.34
HTT-210ENST00000512909 RELL1Q8IUW5 271 aa6.65□□□□□ -1.34
HTT-210ENST00000512909 SVOPQ8N4V2 548 aa6.65□□□□□ -1.34
HTT-210ENST00000512909 IL22RA1Q8N6P7 574 aa6.65□□□□□ -1.34
HTT-210ENST00000512909 BHLHE41Q9C0J9 482 aaPredicted RBP6.65□□□□□ -1.34
HTT-210ENST00000512909 GGT7Q9UJ14 662 aa6.65□□□□□ -1.34
HTT-210ENST00000512909 HCN2Q9UL51 889 aa6.65□□□□□ -1.34
HTT-210ENST00000512909 M0R082 166 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 OIP5O43482 229 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 RECKO95980 971 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 GMPRP36959 345 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 PWP1Q13610 501 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 IKBKEQ14164 716 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 SPRED3Q2MJR0 410 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 TPTE2Q6XPS3 522 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 CHSY3Q70JA7 882 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 ZNF417Q8TAU3 575 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 DCAF11Q8TEB1 546 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 ACDQ96AP0 544 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 ZNF587Q96SQ5 575 aaPredicted RBP6.64□□□□□ -1.35
HTT-210ENST00000512909 POP1Q99575 1024 aaKnown RBP6.64□□□□□ -1.35
HTT-210ENST00000512909 CCSER2Q9H7U1 834 aa6.64□□□□□ -1.35
HTT-210ENST00000512909 SPDYE3A6NKU9 549 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 METTL12A8MUP2 240 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 WIPF1O43516 503 aa6.63□□□□□ -1.35
HTT-210ENST00000512909 ST13P50502 369 aaKnown RBP6.63□□□□□ -1.35
HTT-210ENST00000512909 PTPN12Q05209 780 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms