RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 CEP57L1Q8IYX8 460 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 CHMP4CQ96CF2 233 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 LRRC2Q9BYS8 371 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 GPR108Q9NPR9 543 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 KIF20AO95235 890 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 ZMYM1Q5SVZ6 1142 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
SNX25-205ENST00000512853 FTOQ9C0B1 505 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNX25-205ENST00000512853 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 NDUFB9Q9Y6M9 179 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 COL18A1P39060 1754 aa13.54□□□□□ -0.24
SNX25-205ENST00000512853 A0A1W2PQ27 194 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 A0A1W2PQ64 194 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 A0A1W2PQD8 194 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 CCDC69A6NI79 296 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 PHKG2P15735 406 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 GSDMDP57764 484 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 FGD1P98174 961 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 CEBPZQ03701 1054 aaKnown RBP13.53□□□□□ -0.24
SNX25-205ENST00000512853 ARID5BQ14865 1188 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 UBE3BQ7Z3V4 1068 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 FBXL16Q8N461 479 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 FSIP1Q8NA03 581 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
SNX25-205ENST00000512853 ZNF496Q96IT1 587 aaPredicted RBP13.53□□□□□ -0.24
SNX25-205ENST00000512853 DDX41Q9UJV9 622 aaKnown RBP13.53□□□□□ -0.24
SNX25-205ENST00000512853 CARMIL3Q8ND23 1372 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 MEGF6O75095 1541 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
SNX25-205ENST00000512853 USP27XA6NNY8 438 aa13.52□□□□□ -0.24
SNX25-205ENST00000512853 BECN2A8MW95 431 aa13.52□□□□□ -0.24
SNX25-205ENST00000512853 SKILP12757 684 aa13.52□□□□□ -0.24
SNX25-205ENST00000512853 FMR1NBQ8N0W7 255 aaPredicted RBP13.52□□□□□ -0.24
SNX25-205ENST00000512853 BPIFA3Q9BQP9 254 aa13.52□□□□□ -0.24
SNX25-205ENST00000512853 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.24
SNX25-205ENST00000512853 RTEL1Q9NZ71 1219 aa13.52□□□□□ -0.24
SNX25-205ENST00000512853 ZHX1Q9UKY1 873 aaPredicted RBP13.52□□□□□ -0.24
SNX25-205ENST00000512853 KIF2AO00139 706 aaPredicted RBP13.52□□□□□ -0.25
SNX25-205ENST00000512853 SNRPA1P09661 255 aaKnown RBP13.52□□□□□ -0.25
SNX25-205ENST00000512853 EVCP57679 992 aa13.52□□□□□ -0.25
SNX25-205ENST00000512853 CCAR2Q8N163 923 aaKnown RBP13.52□□□□□ -0.25
SNX25-205ENST00000512853 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.25
SNX25-205ENST00000512853 PAG1Q9NWQ8 432 aa13.52□□□□□ -0.25
SNX25-205ENST00000512853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.251e-6■■■□□ 15.3
SNX25-205ENST00000512853 IMPACTQ9P2X3 320 aa13.52□□□□□ -0.25
SNX25-205ENST00000512853 E7EWF7 191 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 PDIA3P30101 505 aaKnown RBP13.51□□□□□ -0.25
SNX25-205ENST00000512853 FOSBP53539 338 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 ADAMTSL3P82987 1691 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 GABPB1Q06547 395 aaPredicted RBP13.51□□□□□ -0.25
SNX25-205ENST00000512853 PTPN14Q15678 1187 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 AOPEPQ8N6M6 819 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 ZNF397Q8NF99 534 aaPredicted RBP13.51□□□□□ -0.25
SNX25-205ENST00000512853 NAT10Q9H0A0 1025 aaKnown RBP13.51□□□□□ -0.25
SNX25-205ENST00000512853 USP16Q9Y5T5 823 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 MAST3O60307 1309 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 NEDD4P46934 1319 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 A0A087WZG4 1122 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 FOXO4P98177 505 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 SLFNL1Q499Z3 407 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 ATG9AQ7Z3C6 839 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 PLBD2Q8NHP8 589 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 RAPGEF4Q8WZA2 1011 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 ERO1AQ96HE7 468 aa13.51□□□□□ -0.25
SNX25-205ENST00000512853 MORC2Q9Y6X9 1032 aaPredicted RBP13.51□□□□□ -0.25
SNX25-205ENST00000512853 C4AP0C0L4 1744 aa13.5□□□□□ -0.25
SNX25-205ENST00000512853 C4BP0C0L5 1744 aa13.5□□□□□ -0.25
SNX25-205ENST00000512853 GOLIM4O00461 696 aa13.5□□□□□ -0.25
SNX25-205ENST00000512853 HSPD1P10809 573 aaKnown RBP13.5□□□□□ -0.25
SNX25-205ENST00000512853 TATP17735 454 aaPredicted RBP13.5□□□□□ -0.25
SNX25-205ENST00000512853 KCNJ6P48051 423 aa13.5□□□□□ -0.25
SNX25-205ENST00000512853 ME1P48163 572 aa13.5□□□□□ -0.25
SNX25-205ENST00000512853 NAA30Q147X3 362 aaPredicted RBP13.5□□□□□ -0.25
SNX25-205ENST00000512853 ADALQ6DHV7 355 aa13.5□□□□□ -0.25
SNX25-205ENST00000512853 NBPF11Q86T75 865 aa13.5□□□□□ -0.25
SNX25-205ENST00000512853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.5□□□□□ -0.25
SNX25-205ENST00000512853 RBM33Q96EV2 1170 aaKnown RBP13.5□□□□□ -0.25
SNX25-205ENST00000512853 ORAI2Q96SN7 254 aa13.5□□□□□ -0.25
SNX25-205ENST00000512853 NCOA5Q9HCD5 579 aaKnown RBP13.5□□□□□ -0.25
SNX25-205ENST00000512853 PCDHA7Q9UN72 937 aa13.5□□□□□ -0.25
SNX25-205ENST00000512853 H7C1W4 665 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 YEATS4O95619 227 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 FDPSP14324 419 aaKnown RBP13.49□□□□□ -0.25
SNX25-205ENST00000512853 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
SNX25-205ENST00000512853 DHX8Q14562 1220 aaKnown RBP13.49□□□□□ -0.25
SNX25-205ENST00000512853 LMBR1LQ6UX01 489 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 NFATC2IPQ8NCF5 419 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 CCDC150Q8NCX0 1101 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 KIF18AQ8NI77 898 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 FMNL2Q96PY5 1086 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 UBR2Q8IWV8 1755 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 RNF113AO15541 343 aaKnown RBP13.49□□□□□ -0.25
SNX25-205ENST00000512853 FILIP1Q7Z7B0 1213 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 IFNL2Q8IZJ0 200 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 LINC00301Q8NCQ3 95 aa13.49□□□□□ -0.25
SNX25-205ENST00000512853 ZNF215Q9UL58 517 aaPredicted RBP13.49□□□□□ -0.25
SNX25-205ENST00000512853 A0A087WWV3 80 aa13.48□□□□□ -0.25
SNX25-205ENST00000512853 A0A0G2JLW4 131 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms