RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 TRMT44Q8IYL2 757 aaKnown RBP12.26□□□□□ -0.45
SNF8-211ENST00000512243 PIGBQ92521 554 aa12.26□□□□□ -0.45
SNF8-211ENST00000512243 KLF16Q9BXK1 252 aaPredicted RBP12.26□□□□□ -0.45
SNF8-211ENST00000512243 ZIC2O95409 532 aaPredicted RBP12.25□□□□□ -0.45
SNF8-211ENST00000512243 NFATC2IPQ8NCF5 419 aa12.25□□□□□ -0.45
SNF8-211ENST00000512243 ITPKCQ96DU7 683 aa12.25□□□□□ -0.45
SNF8-211ENST00000512243 LAMB4A4D0S4 1761 aa12.24□□□□□ -0.45
SNF8-211ENST00000512243 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
SNF8-211ENST00000512243 TAF7Q15545 349 aaPredicted RBP12.24□□□□□ -0.45
SNF8-211ENST00000512243 ZNF831Q5JPB2 1677 aa12.24□□□□□ -0.45
SNF8-211ENST00000512243 WDR63Q8IWG1 891 aa12.24□□□□□ -0.45
SNF8-211ENST00000512243 TAF1LQ8IZX4 1826 aa12.24□□□□□ -0.45
SNF8-211ENST00000512243 RREB1Q92766 1687 aa12.24□□□□□ -0.45
SNF8-211ENST00000512243 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
SNF8-211ENST00000512243 KIFC2Q96AC6 838 aa12.24□□□□□ -0.45
SNF8-211ENST00000512243 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
SNF8-211ENST00000512243 CICQ96RK0 1608 aaPredicted RBP12.23□□□□□ -0.45
SNF8-211ENST00000512243 KCPQ6ZWJ8 1503 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 PALLDQ8WX93 1383 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 IL16Q14005 1332 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 ZBED9Q6R2W3 1325 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 ZC3H4Q9UPT8 1303 aaKnown RBP12.23□□□□□ -0.45
SNF8-211ENST00000512243 PTF1AQ7RTS3 328 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 TTC5Q8N0Z6 440 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 OCSTAMPQ9BR26 566 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 IFT57Q9NWB7 429 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 TSPYL4Q9UJ04 414 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 MAP4K5Q9Y4K4 846 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 TJP1Q07157 1748 aa12.23□□□□□ -0.45
SNF8-211ENST00000512243 C5P01031 1676 aa12.22□□□□□ -0.45
SNF8-211ENST00000512243 APBA3O96018 575 aa12.22□□□□□ -0.45
SNF8-211ENST00000512243 PRKCSHP14314 528 aaPredicted RBP12.22□□□□□ -0.45
SNF8-211ENST00000512243 BAG6P46379 1132 aa12.22□□□□□ -0.45
SNF8-211ENST00000512243 GNAI1P63096 354 aa12.22□□□□□ -0.45
SNF8-211ENST00000512243 SLC39A6Q13433 755 aa12.22□□□□□ -0.45
SNF8-211ENST00000512243 TMEM259Q4ZIN3 620 aa12.22□□□□□ -0.45
SNF8-211ENST00000512243 CCDC125Q86Z20 511 aa12.22□□□□□ -0.45
SNF8-211ENST00000512243 BABAM1Q9NWV8 329 aa12.22□□□□□ -0.45
SNF8-211ENST00000512243 ASAP1Q9ULH1 1129 aa12.22□□□□□ -0.45
SNF8-211ENST00000512243 COL5A3P25940 1745 aaPredicted RBP12.22□□□□□ -0.45
SNF8-211ENST00000512243 NUP188Q5SRE5 1749 aa12.21□□□□□ -0.45
SNF8-211ENST00000512243 MRPL14Q6P1L8 145 aaKnown RBP12.21□□□□□ -0.45
SNF8-211ENST00000512243 ZNF790Q6PG37 636 aa12.21□□□□□ -0.45
SNF8-211ENST00000512243 SLC10A4Q96EP9 437 aa12.21□□□□□ -0.45
SNF8-211ENST00000512243 ZFP42Q96MM3 310 aa12.21□□□□□ -0.45
SNF8-211ENST00000512243 YTHDC1Q96MU7 727 aaKnown RBP12.21□□□□□ -0.45
SNF8-211ENST00000512243 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
SNF8-211ENST00000512243 ATG3Q9NT62 314 aa12.21□□□□□ -0.45
SNF8-211ENST00000512243 PTK2Q05397 1052 aa12.2□□□□□ -0.46
SNF8-211ENST00000512243 MIS18AQ9NYP9 233 aa12.2□□□□□ -0.46
SNF8-211ENST00000512243 E9PSI1 815 aa12.19□□□□□ -0.46
SNF8-211ENST00000512243 CHL1O00533 1208 aa12.19□□□□□ -0.46
SNF8-211ENST00000512243 ZNF853P0CG23 659 aa12.19□□□□□ -0.46
SNF8-211ENST00000512243 PNMA1Q8ND90 353 aa12.19□□□□□ -0.46
SNF8-211ENST00000512243 ADAM32Q8TC27 787 aa12.19□□□□□ -0.46
SNF8-211ENST00000512243 FMNL2Q96PY5 1086 aa12.19□□□□□ -0.46
SNF8-211ENST00000512243 PURBQ96QR8 312 aaKnown RBP12.19□□□□□ -0.46
SNF8-211ENST00000512243 MYH16Q9H6N6 1097 aa12.19□□□□□ -0.46
SNF8-211ENST00000512243 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
SNF8-211ENST00000512243 HEG1Q9ULI3 1381 aa12.18□□□□□ -0.46
SNF8-211ENST00000512243 FANCIQ9NVI1 1328 aa12.18□□□□□ -0.46
SNF8-211ENST00000512243 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
SNF8-211ENST00000512243 PLSCR1O15162 318 aa12.18□□□□□ -0.46
SNF8-211ENST00000512243 KCNQ3O43525 872 aa12.18□□□□□ -0.46
SNF8-211ENST00000512243 PTCD1O75127 700 aaKnown RBP12.18□□□□□ -0.46
SNF8-211ENST00000512243 SIK1P57059 783 aa12.18□□□□□ -0.46
SNF8-211ENST00000512243 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
SNF8-211ENST00000512243 CACNA1FO60840 1977 aa12.18□□□□□ -0.46
SNF8-211ENST00000512243 C4BP0C0L5 1744 aa12.17□□□□□ -0.46
SNF8-211ENST00000512243 SCARF1Q14162 830 aa12.17□□□□□ -0.46
SNF8-211ENST00000512243 TREML4Q6UXN2 200 aa12.17□□□□□ -0.46
SNF8-211ENST00000512243 TSR2Q969E8 191 aaKnown RBP12.17□□□□□ -0.46
SNF8-211ENST00000512243 ZNF496Q96IT1 587 aaPredicted RBP12.17□□□□□ -0.46
SNF8-211ENST00000512243 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
SNF8-211ENST00000512243 TUBGCP6Q96RT7 1819 aa12.16□□□□□ -0.46
SNF8-211ENST00000512243 MYH14Q7Z406 1995 aaKnown RBP12.16□□□□□ -0.46
SNF8-211ENST00000512243 EIF4A1P60842 406 aaKnown RBP12.16□□□□□ -0.46
SNF8-211ENST00000512243 SLC27A3Q5K4L6 730 aa12.16□□□□□ -0.46
SNF8-211ENST00000512243 C6orf118Q5T5N4 469 aa12.16□□□□□ -0.46
SNF8-211ENST00000512243 DEFB132Q7Z7B7 95 aa12.16□□□□□ -0.46
SNF8-211ENST00000512243 KCTD15Q96SI1 283 aaPredicted RBP12.16□□□□□ -0.46
SNF8-211ENST00000512243 HMGB2P26583 209 aaKnown RBP12.15□□□□□ -0.46
SNF8-211ENST00000512243 SLFN5Q08AF3 891 aa12.15□□□□□ -0.46
SNF8-211ENST00000512243 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
SNF8-211ENST00000512243 TXNRD1Q16881 649 aa12.15□□□□□ -0.46
SNF8-211ENST00000512243 CAMKK2Q96RR4 588 aa12.15□□□□□ -0.46
SNF8-211ENST00000512243 GPSM3Q9Y4H4 160 aa12.15□□□□□ -0.46
SNF8-211ENST00000512243 UBR3Q6ZT12 1888 aa12.14□□□□□ -0.47
SNF8-211ENST00000512243 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
SNF8-211ENST00000512243 SNRPA1P09661 255 aaKnown RBP12.14□□□□□ -0.47
SNF8-211ENST00000512243 PPP1R26Q5T8A7 1209 aaPredicted RBP12.14□□□□□ -0.47
SNF8-211ENST00000512243 SOBPA7XYQ1 873 aa12.13□□□□□ -0.47
SNF8-211ENST00000512243 WFS1O76024 890 aa12.13□□□□□ -0.47
SNF8-211ENST00000512243 HOXB7P09629 217 aa12.13□□□□□ -0.47
SNF8-211ENST00000512243 NFX1Q12986 1120 aaKnown RBP12.13□□□□□ -0.47
SNF8-211ENST00000512243 DNAJC10Q8IXB1 793 aa12.13□□□□□ -0.47
SNF8-211ENST00000512243 MEIOBQ8N635 442 aa12.13□□□□□ -0.47
SNF8-211ENST00000512243 SLC4A9Q96Q91 983 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms