RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 ANGEL1Q9UNK9 670 aaKnown RBP15.77■□□□□ 0.12
COPS4-210ENST00000511708 PPP2R1AP30153 589 aa15.76■□□□□ 0.11
COPS4-210ENST00000511708 SP3Q02447 781 aa15.76■□□□□ 0.11
COPS4-210ENST00000511708 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
COPS4-210ENST00000511708 DACT2Q5SW24 774 aa15.76■□□□□ 0.11
COPS4-210ENST00000511708 PLEKHF1Q96S99 279 aa15.76■□□□□ 0.11
COPS4-210ENST00000511708 SEC31BQ9NQW1 1179 aa15.76■□□□□ 0.11
COPS4-210ENST00000511708 TSPYL4Q9UJ04 414 aa15.76■□□□□ 0.11
COPS4-210ENST00000511708 ECM29Q5VYK3 1845 aa15.75■□□□□ 0.11
COPS4-210ENST00000511708 SLC10A4Q96EP9 437 aa15.75■□□□□ 0.11
COPS4-210ENST00000511708 FZD1Q9UP38 647 aa15.75■□□□□ 0.11
COPS4-210ENST00000511708 COL1A1P02452 1464 aaPredicted RBP15.75■□□□□ 0.11
COPS4-210ENST00000511708 SSC5DA1L4H1 1573 aa15.75■□□□□ 0.11
COPS4-210ENST00000511708 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
COPS4-210ENST00000511708 SASH1O94885 1247 aa15.74■□□□□ 0.11
COPS4-210ENST00000511708 NBPF11Q86T75 865 aa15.74■□□□□ 0.11
COPS4-210ENST00000511708 APOBEC3FQ8IUX4 373 aaKnown RBP15.74■□□□□ 0.11
COPS4-210ENST00000511708 OGFOD1Q8N543 542 aa15.74■□□□□ 0.11
COPS4-210ENST00000511708 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
COPS4-210ENST00000511708 ZBED3Q96IU2 234 aaPredicted RBP15.74■□□□□ 0.11
COPS4-210ENST00000511708 CLMNQ96JQ2 1002 aa15.74■□□□□ 0.11
COPS4-210ENST00000511708 MXD3Q9BW11 206 aa15.74■□□□□ 0.11
COPS4-210ENST00000511708 PTCH2Q9Y6C5 1203 aa15.74■□□□□ 0.11
COPS4-210ENST00000511708 XDHP47989 1333 aa15.73■□□□□ 0.11
COPS4-210ENST00000511708 TESPA1A2RU30 521 aaPredicted RBP15.73■□□□□ 0.11
COPS4-210ENST00000511708 UNCXA6NJT0 531 aa15.73■□□□□ 0.11
COPS4-210ENST00000511708 MNX1P50219 401 aaPredicted RBP15.73■□□□□ 0.11
COPS4-210ENST00000511708 MMP14P50281 582 aa15.73■□□□□ 0.11
COPS4-210ENST00000511708 TRIM28Q13263 835 aaKnown RBP15.73■□□□□ 0.11
COPS4-210ENST00000511708 SLC4A8Q2Y0W8 1093 aa15.73■□□□□ 0.11
COPS4-210ENST00000511708 SLC9C1Q4G0N8 1177 aa15.73■□□□□ 0.11
COPS4-210ENST00000511708 PTPN18Q99952 460 aa15.73■□□□□ 0.11
COPS4-210ENST00000511708 MYO3BQ8WXR4 1341 aa15.72■□□□□ 0.11
COPS4-210ENST00000511708 ATP5J2-PTCD1G3V325 749 aa15.72■□□□□ 0.11
COPS4-210ENST00000511708 NEFMP07197 916 aa15.72■□□□□ 0.11
COPS4-210ENST00000511708 GJA5P36382 358 aa15.72■□□□□ 0.11
COPS4-210ENST00000511708 RTL5Q5HYW3 569 aaPredicted RBP15.72■□□□□ 0.11
COPS4-210ENST00000511708 OTUD7BQ6GQQ9 843 aa15.72■□□□□ 0.11
COPS4-210ENST00000511708 BABAM1Q9NWV8 329 aa15.72■□□□□ 0.11
COPS4-210ENST00000511708 OTOFQ9HC10 1997 aa15.72■□□□□ 0.11
COPS4-210ENST00000511708 MED23Q9ULK4 1368 aa15.72■□□□□ 0.11
COPS4-210ENST00000511708 ZSWIM8A7E2V4 1837 aa15.71■□□□□ 0.11
COPS4-210ENST00000511708 ATP2B4P23634 1241 aa15.71■□□□□ 0.11
COPS4-210ENST00000511708 STRIP1Q5VSL9 837 aa15.71■□□□□ 0.11
COPS4-210ENST00000511708 ANKRD13DQ6ZTN6 518 aa15.71■□□□□ 0.11
COPS4-210ENST00000511708 UNC80Q8N2C7 3258 aa15.7■□□□□ 0.1
COPS4-210ENST00000511708 WTIPA6NIX2 430 aaPredicted RBP15.7■□□□□ 0.1
COPS4-210ENST00000511708 SPEF2Q9C093 1822 aa15.69■□□□□ 0.1
COPS4-210ENST00000511708 SHISA4Q96DD7 197 aa15.69■□□□□ 0.1
COPS4-210ENST00000511708 DEFB129Q9H1M3 183 aa15.69■□□□□ 0.1
COPS4-210ENST00000511708 CHPF2Q9P2E5 772 aa15.69■□□□□ 0.1
COPS4-210ENST00000511708 PPP1R12BO60237 982 aaPredicted RBP15.68■□□□□ 0.1
COPS4-210ENST00000511708 ARHGEF6Q15052 776 aa15.68■□□□□ 0.1
COPS4-210ENST00000511708 ZBTB38Q8NAP3 1195 aaPredicted RBP15.68■□□□□ 0.1
COPS4-210ENST00000511708 CCDC152Q4G0S7 254 aa15.67■□□□□ 0.1
COPS4-210ENST00000511708 UBE2Q1Q7Z7E8 422 aa15.67■□□□□ 0.1
COPS4-210ENST00000511708 DPF3Q92784 378 aa15.67■□□□□ 0.1
COPS4-210ENST00000511708 MS4A4AQ96JQ5 239 aa15.67■□□□□ 0.1
COPS4-210ENST00000511708 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.67■□□□□ 0.1
COPS4-210ENST00000511708 PPP2R3BQ9Y5P8 575 aa15.67■□□□□ 0.1
COPS4-210ENST00000511708 A0A1W2PPC1 479 aa15.66■□□□□ 0.1
COPS4-210ENST00000511708 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
COPS4-210ENST00000511708 MYCP01106 439 aaPredicted RBP15.66■□□□□ 0.1
COPS4-210ENST00000511708 HSP90B1P14625 803 aaKnown RBP15.66■□□□□ 0.1
COPS4-210ENST00000511708 KRT24Q2M2I5 525 aa15.66■□□□□ 0.1
COPS4-210ENST00000511708 SH3TC2Q8TF17 1288 aa15.66■□□□□ 0.1
COPS4-210ENST00000511708 COA1Q9GZY4 146 aa15.66■□□□□ 0.1
COPS4-210ENST00000511708 MYH3P11055 1940 aa15.66■□□□□ 0.1
COPS4-210ENST00000511708 USP2O75604 605 aaPredicted RBP15.65■□□□□ 0.1
COPS4-210ENST00000511708 KIAA0825Q8IV33 1275 aa15.65■□□□□ 0.1
COPS4-210ENST00000511708 ANKRD18AQ8IVF6 992 aa15.65■□□□□ 0.1
COPS4-210ENST00000511708 ZNF804BA4D1E1 1349 aa15.65■□□□□ 0.1
COPS4-210ENST00000511708 PDE8AO60658 829 aa15.64■□□□□ 0.09
COPS4-210ENST00000511708 IREB2P48200 963 aaKnown RBP15.64■□□□□ 0.09
COPS4-210ENST00000511708 TTLL5Q6EMB2 1281 aa15.64■□□□□ 0.09
COPS4-210ENST00000511708 TXNRD3Q86VQ6 643 aa15.64■□□□□ 0.09
COPS4-210ENST00000511708 ANKRD13AQ8IZ07 590 aa15.64■□□□□ 0.09
COPS4-210ENST00000511708 MTMR14Q8NCE2 650 aa15.64■□□□□ 0.09
COPS4-210ENST00000511708 FBXW7Q969H0 707 aa15.64■□□□□ 0.09
COPS4-210ENST00000511708 PCCAP05165 728 aaPredicted RBP15.63■□□□□ 0.09
COPS4-210ENST00000511708 CCT4P50991 539 aaKnown RBP15.63■□□□□ 0.09
COPS4-210ENST00000511708 TAF1CQ15572 869 aaPredicted RBP15.63■□□□□ 0.09
COPS4-210ENST00000511708 SUPT20HL1Q3ZLR7 823 aa15.63■□□□□ 0.09
COPS4-210ENST00000511708 BRI3BPQ8WY22 251 aa15.63■□□□□ 0.09
COPS4-210ENST00000511708 LRCH3Q96II8 777 aa15.63■□□□□ 0.09
COPS4-210ENST00000511708 CCDC85AQ96PX6 553 aaPredicted RBP15.63■□□□□ 0.09
COPS4-210ENST00000511708 ZFYVE28Q9HCC9 887 aa15.63■□□□□ 0.09
COPS4-210ENST00000511708 DBF4Q9UBU7 674 aaPredicted RBP15.63■□□□□ 0.09
COPS4-210ENST00000511708 MINPP1Q9UNW1 487 aa15.63■□□□□ 0.09
COPS4-210ENST00000511708 MAPK8IP3Q9UPT6 1336 aa15.63■□□□□ 0.09
COPS4-210ENST00000511708 ZBTB7BO15156 539 aaPredicted RBP15.62■□□□□ 0.09
COPS4-210ENST00000511708 MTFR1Q15390 333 aa15.62■□□□□ 0.09
COPS4-210ENST00000511708 NBPF12Q5TAG4 269 aaPredicted RBP15.62■□□□□ 0.09
COPS4-210ENST00000511708 HDGFL1Q5TGJ6 251 aa15.62■□□□□ 0.09
COPS4-210ENST00000511708 HTATIP2Q9BUP3 242 aa15.62■□□□□ 0.09
COPS4-210ENST00000511708 ARHGAP39Q9C0H5 1083 aa15.62■□□□□ 0.09
COPS4-210ENST00000511708 CHL1O00533 1208 aa15.61■□□□□ 0.09
COPS4-210ENST00000511708 HOXB7P09629 217 aa15.61■□□□□ 0.09
COPS4-210ENST00000511708 TRIM26Q12899 539 aaPredicted RBP15.61■□□□□ 0.09
COPS4-210ENST00000511708 DLGAP5Q15398 846 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms