RNA–Protein interactions for RNA: ENST00000511642.5

CCND3-215, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 2,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-215ENST00000511642 EYA2O00167 538 aa16.21■□□□□ 0.19
CCND3-215ENST00000511642 MTERF4Q7Z6M4 381 aaKnown RBP16.21■□□□□ 0.19
CCND3-215ENST00000511642 ZNF594Q96JF6 807 aaPredicted RBP16.21■□□□□ 0.19
CCND3-215ENST00000511642 RCOR1Q9UKL0 485 aa16.21■□□□□ 0.19
CCND3-215ENST00000511642 FGD1P98174 961 aa16.21■□□□□ 0.19
CCND3-215ENST00000511642 GOLPH3LQ9H4A5 285 aa16.21■□□□□ 0.19
CCND3-215ENST00000511642 STRCP1A6NGW2 1772 aa16.2■□□□□ 0.18
CCND3-215ENST00000511642 A1BGP04217 495 aa16.2■□□□□ 0.18
CCND3-215ENST00000511642 ZNF165P49910 485 aa16.2■□□□□ 0.18
CCND3-215ENST00000511642 CCDC186Q7Z3E2 898 aa16.2■□□□□ 0.18
CCND3-215ENST00000511642 NCOA5Q9HCD5 579 aaKnown RBP16.2■□□□□ 0.18
CCND3-215ENST00000511642 PAPPAQ13219 1627 aa16.2■□□□□ 0.18
CCND3-215ENST00000511642 SPEF2Q9C093 1822 aa16.2■□□□□ 0.18
CCND3-215ENST00000511642 M0R2C6 588 aa16.2■□□□□ 0.18
CCND3-215ENST00000511642 RNF113AO15541 343 aaKnown RBP16.2■□□□□ 0.18
CCND3-215ENST00000511642 FOSBP53539 338 aa16.2■□□□□ 0.18
CCND3-215ENST00000511642 CCT2P78371 535 aaKnown RBP16.2■□□□□ 0.18
CCND3-215ENST00000511642 CEBPZQ03701 1054 aaKnown RBP16.2■□□□□ 0.18
CCND3-215ENST00000511642 ILDR1Q86SU0 546 aaPredicted RBP16.2■□□□□ 0.18
CCND3-215ENST00000511642 NRBP1Q9UHY1 535 aa16.2■□□□□ 0.18
CCND3-215ENST00000511642 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
CCND3-215ENST00000511642 A0A1B0GUL7 405 aa16.19■□□□□ 0.18
CCND3-215ENST00000511642 CIAO1O76071 339 aa16.19■□□□□ 0.18
CCND3-215ENST00000511642 IFIT1P09914 478 aaKnown RBP16.19■□□□□ 0.18
CCND3-215ENST00000511642 LRMPQ12912 555 aa16.19■□□□□ 0.18
CCND3-215ENST00000511642 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.19■□□□□ 0.18
CCND3-215ENST00000511642 CCDC191Q8NCU4 936 aa16.19■□□□□ 0.18
CCND3-215ENST00000511642 USP28Q96RU2 1077 aa16.19■□□□□ 0.18
CCND3-215ENST00000511642 PUS3Q9BZE2 481 aaKnown RBP16.19■□□□□ 0.18
CCND3-215ENST00000511642 ZBTB3Q9H5J0 574 aa16.19■□□□□ 0.18
CCND3-215ENST00000511642 FOXP2O15409 715 aa16.19■□□□□ 0.18
CCND3-215ENST00000511642 PDIA3P30101 505 aaKnown RBP16.19■□□□□ 0.18
CCND3-215ENST00000511642 SNW1Q13573 536 aaKnown RBP16.19■□□□□ 0.18
CCND3-215ENST00000511642 IQCB1Q15051 598 aa16.19■□□□□ 0.18
CCND3-215ENST00000511642 TTLL5Q6EMB2 1281 aa16.18■□□□□ 0.18
CCND3-215ENST00000511642 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCND3-215ENST00000511642 ZNF274Q96GC6 653 aaPredicted RBP16.18■□□□□ 0.18
CCND3-215ENST00000511642 TRIM5Q9C035 493 aa16.18■□□□□ 0.18
CCND3-215ENST00000511642 C11orf57Q6ZUT1 292 aaPredicted RBP16.18■□□□□ 0.18
CCND3-215ENST00000511642 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
CCND3-215ENST00000511642 CCAR1Q8IX12 1150 aaKnown RBP16.18■□□□□ 0.18
CCND3-215ENST00000511642 FBXL16Q8N461 479 aa16.18■□□□□ 0.18
CCND3-215ENST00000511642 ENGASEQ8NFI3 743 aa16.18■□□□□ 0.18
CCND3-215ENST00000511642 OSBP2Q969R2 916 aa16.18■□□□□ 0.18
CCND3-215ENST00000511642 ATG3Q9NT62 314 aa16.18■□□□□ 0.18
CCND3-215ENST00000511642 PCDH11XQ9BZA7 1347 aa16.17■□□□□ 0.18
CCND3-215ENST00000511642 PCDH11YQ9BZA8 1340 aa16.17■□□□□ 0.18
CCND3-215ENST00000511642 ZBTB22O15209 634 aa16.17■□□□□ 0.18
CCND3-215ENST00000511642 PPFIA3O75145 1194 aa16.17■□□□□ 0.18
CCND3-215ENST00000511642 CAVIN2O95810 425 aa16.17■□□□□ 0.18
CCND3-215ENST00000511642 FDPSP14324 419 aaKnown RBP16.17■□□□□ 0.18
CCND3-215ENST00000511642 NWD2Q9ULI1 1742 aa16.17■□□□□ 0.18
CCND3-215ENST00000511642 TNS2Q63HR2 1409 aa16.17■□□□□ 0.18
CCND3-215ENST00000511642 EVCP57679 992 aa16.16■□□□□ 0.18
CCND3-215ENST00000511642 ZSCAN25Q6NSZ9 544 aa16.16■□□□□ 0.18
CCND3-215ENST00000511642 KIF3AQ9Y496 699 aa16.16■□□□□ 0.18
CCND3-215ENST00000511642 CARMIL3Q8ND23 1372 aa16.16■□□□□ 0.18
CCND3-215ENST00000511642 FAM177BA6PVY3 158 aa16.16■□□□□ 0.18
CCND3-215ENST00000511642 ERVV-2B6SEH9 535 aa16.16■□□□□ 0.18
CCND3-215ENST00000511642 CCDC144BQ3MJ40 725 aa16.16■□□□□ 0.18
CCND3-215ENST00000511642 ATL3Q6DD88 541 aa16.16■□□□□ 0.18
CCND3-215ENST00000511642 CCDC144CPQ8IYA2 1237 aa16.16■□□□□ 0.18
CCND3-215ENST00000511642 ZCRB1Q8TBF4 217 aaKnown RBP16.16■□□□□ 0.18
CCND3-215ENST00000511642 GPHNQ9NQX3 736 aaPredicted RBP16.16■□□□□ 0.18
CCND3-215ENST00000511642 RIOK3O14730 519 aaKnown RBP16.15■□□□□ 0.18
CCND3-215ENST00000511642 CDC25BP30305 580 aa16.15■□□□□ 0.18
CCND3-215ENST00000511642 SARM1Q6SZW1 724 aa16.15■□□□□ 0.18
CCND3-215ENST00000511642 WDR17Q8IZU2 1322 aa16.15■□□□□ 0.18
CCND3-215ENST00000511642 CTAGE5O15320 804 aa16.15■□□□□ 0.18
CCND3-215ENST00000511642 ADORA1P30542 326 aa16.15■□□□□ 0.18
CCND3-215ENST00000511642 GUCY1B3Q02153 619 aa16.15■□□□□ 0.18
CCND3-215ENST00000511642 ISCA1Q9BUE6 129 aa16.15■□□□□ 0.18
CCND3-215ENST00000511642 ZMYND15Q9H091 742 aa16.15■□□□□ 0.18
CCND3-215ENST00000511642 BCL2L12Q9HB09 334 aa16.15■□□□□ 0.18
CCND3-215ENST00000511642 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
CCND3-215ENST00000511642 STX1AQ16623 288 aa16.14■□□□□ 0.17
CCND3-215ENST00000511642 CLIP2Q9UDT6 1046 aa16.14■□□□□ 0.17
CCND3-215ENST00000511642 FAM160A1Q05DH4 1040 aa16.14■□□□□ 0.17
CCND3-215ENST00000511642 DRC7Q8IY82 874 aa16.14■□□□□ 0.17
CCND3-215ENST00000511642 CACTINQ8WUQ7 758 aaKnown RBP16.14■□□□□ 0.17
CCND3-215ENST00000511642 ZNF396Q96N95 335 aaPredicted RBP16.14■□□□□ 0.17
CCND3-215ENST00000511642 A0A087WWV3 80 aa16.13■□□□□ 0.17
CCND3-215ENST00000511642 SCARF1Q14162 830 aa16.13■□□□□ 0.17
CCND3-215ENST00000511642 CEP126Q9P2H0 1117 aa16.13■□□□□ 0.17
CCND3-215ENST00000511642 SHANK3Q9BYB0 1731 aa16.13■□□□□ 0.17
CCND3-215ENST00000511642 FKBP4Q02790 459 aaKnown RBP eCLIP16.13■□□□□ 0.17
CCND3-215ENST00000511642 CCDC73Q6ZRK6 1079 aa16.13■□□□□ 0.17
CCND3-215ENST00000511642 CADPS2Q86UW7 1296 aa16.13■□□□□ 0.17
CCND3-215ENST00000511642 DHX40Q8IX18 779 aaKnown RBP16.13■□□□□ 0.17
CCND3-215ENST00000511642 ARID3AQ99856 593 aa16.13■□□□□ 0.17
CCND3-215ENST00000511642 NAP1L2Q9ULW6 460 aaPredicted RBP16.13■□□□□ 0.17
CCND3-215ENST00000511642 DDX60Q8IY21 1712 aaKnown RBP16.13■□□□□ 0.17
CCND3-215ENST00000511642 FSIP1Q8NA03 581 aa16.12■□□□□ 0.17
CCND3-215ENST00000511642 XAGE2Q96GT9 111 aa16.12■□□□□ 0.17
CCND3-215ENST00000511642 COL5A2P05997 1499 aaPredicted RBP16.12■□□□□ 0.17
CCND3-215ENST00000511642 CTIFO43310 598 aaKnown RBP16.12■□□□□ 0.17
CCND3-215ENST00000511642 MB21D2Q8IYB1 491 aaPredicted RBP16.12■□□□□ 0.17
CCND3-215ENST00000511642 FMR1NBQ8N0W7 255 aaPredicted RBP16.12■□□□□ 0.17
CCND3-215ENST00000511642 MRFAP1L1Q96HT8 127 aa16.12■□□□□ 0.17
CCND3-215ENST00000511642 CCDC94Q9BW85 323 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms