RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 RASSF4Q9H2L5 321 aa6.83□□□□□ -1.32
SCAMP1-204ENST00000511551 FNDC3AQ9Y2H6 1198 aaKnown RBP6.83□□□□□ -1.32
SCAMP1-204ENST00000511551 ACIN1Q9UKV3 1341 aaKnown RBP6.82□□□□□ -1.32
SCAMP1-204ENST00000511551 ADAM11O75078 769 aa6.82□□□□□ -1.32
SCAMP1-204ENST00000511551 EPHA1P21709 976 aa6.82□□□□□ -1.32
SCAMP1-204ENST00000511551 TTC39BQ5VTQ0 682 aaPredicted RBP6.82□□□□□ -1.32
SCAMP1-204ENST00000511551 FAM117BQ6P1L5 589 aa6.82□□□□□ -1.32
SCAMP1-204ENST00000511551 FOXD4L4Q8WXT5 416 aaPredicted RBP6.82□□□□□ -1.32
SCAMP1-204ENST00000511551 CARD10Q9BWT7 1032 aa6.82□□□□□ -1.32
SCAMP1-204ENST00000511551 DDX3YO15523 660 aaKnown RBP6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 RFX1P22670 979 aa6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 SCNN1AP37088 669 aa6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 FAM69CQ0P6D2 419 aa6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 ANKRD34AQ69YU3 496 aa6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 SHKBP1Q8TBC3 707 aa6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 WNT8BQ93098 351 aa6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 KLHDC7BQ96G42 594 aa6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 POP1Q99575 1024 aaKnown RBP6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 SEC31BQ9NQW1 1179 aa6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 SH2B1Q9NRF2 756 aaPredicted RBP6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 ADGRE2Q9UHX3 823 aa6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 NOVA2Q9UNW9 492 aaKnown RBP6.81□□□□□ -1.32
SCAMP1-204ENST00000511551 BMP3P12645 472 aa6.8□□□□□ -1.32
SCAMP1-204ENST00000511551 PTPRAP18433 802 aa6.8□□□□□ -1.32
SCAMP1-204ENST00000511551 CDC25BP30305 580 aa6.8□□□□□ -1.32
SCAMP1-204ENST00000511551 BEND4Q6ZU67 534 aa6.8□□□□□ -1.32
SCAMP1-204ENST00000511551 ABI2Q9NYB9 513 aaPredicted RBP6.8□□□□□ -1.32
SCAMP1-204ENST00000511551 HIF3AQ9Y2N7 669 aa6.8□□□□□ -1.32
SCAMP1-204ENST00000511551 ARID1BQ8NFD5 2236 aaPredicted RBP6.8□□□□□ -1.32
SCAMP1-204ENST00000511551 PRMT3O60678 531 aa6.79□□□□□ -1.32
SCAMP1-204ENST00000511551 ZAP70P43403 619 aa6.79□□□□□ -1.32
SCAMP1-204ENST00000511551 PIP4K2BP78356 416 aa6.79□□□□□ -1.32
SCAMP1-204ENST00000511551 FZD5Q13467 585 aa6.79□□□□□ -1.32
SCAMP1-204ENST00000511551 ELOAQ14241 798 aaKnown RBP6.79□□□□□ -1.32
SCAMP1-204ENST00000511551 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
SCAMP1-204ENST00000511551 UBASH3BQ8TF42 649 aa6.79□□□□□ -1.32
SCAMP1-204ENST00000511551 OSGEPQ9NPF4 335 aa6.79□□□□□ -1.32
SCAMP1-204ENST00000511551 MEGF11A6BM72 1044 aa6.78□□□□□ -1.32
SCAMP1-204ENST00000511551 SART1O43290 800 aaKnown RBP6.78□□□□□ -1.32
SCAMP1-204ENST00000511551 CYP2E1P05181 493 aaPredicted RBP6.78□□□□□ -1.32
SCAMP1-204ENST00000511551 PREPP48147 710 aa6.78□□□□□ -1.32
SCAMP1-204ENST00000511551 CDCA8Q53HL2 280 aa6.78□□□□□ -1.32
SCAMP1-204ENST00000511551 RNF208Q9H0X6 261 aa6.78□□□□□ -1.32
SCAMP1-204ENST00000511551 H3BRJ5 948 aa6.77□□□□□ -1.33
SCAMP1-204ENST00000511551 PDE12Q6L8Q7 609 aaKnown RBP6.77□□□□□ -1.33
SCAMP1-204ENST00000511551 CAPN12Q6ZSI9 719 aa6.77□□□□□ -1.33
SCAMP1-204ENST00000511551 NCAPG2Q86XI2 1143 aa6.77□□□□□ -1.33
SCAMP1-204ENST00000511551 GPR152Q8TDT2 470 aa6.77□□□□□ -1.33
SCAMP1-204ENST00000511551 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
SCAMP1-204ENST00000511551 KCNF1Q9H3M0 494 aa6.77□□□□□ -1.33
SCAMP1-204ENST00000511551 STIM2Q9P246 746 aa6.77□□□□□ -1.33
SCAMP1-204ENST00000511551 ZMIZ1Q9ULJ6 1067 aa6.77□□□□□ -1.33
SCAMP1-204ENST00000511551 WDR64B1ANS9 1081 aa6.76□□□□□ -1.33
SCAMP1-204ENST00000511551 NFKBIEO00221 500 aa6.76□□□□□ -1.33
SCAMP1-204ENST00000511551 ZBTB39O15060 712 aa6.76□□□□□ -1.33
SCAMP1-204ENST00000511551 PRKCSHP14314 528 aaPredicted RBP6.76□□□□□ -1.33
SCAMP1-204ENST00000511551 HOXA10P31260 410 aaPredicted RBP6.76□□□□□ -1.33
SCAMP1-204ENST00000511551 ZMYND15Q9H091 742 aa6.76□□□□□ -1.33
SCAMP1-204ENST00000511551 CXXC1Q9P0U4 656 aaPredicted RBP6.76□□□□□ -1.33
SCAMP1-204ENST00000511551 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
SCAMP1-204ENST00000511551 SALL4Q9UJQ4 1053 aa6.76□□□□□ -1.33
SCAMP1-204ENST00000511551 FAM177BA6PVY3 158 aa6.75□□□□□ -1.33
SCAMP1-204ENST00000511551 CABP4P57796 275 aa6.75□□□□□ -1.33
SCAMP1-204ENST00000511551 ELP3Q9H9T3 547 aa6.75□□□□□ -1.33
SCAMP1-204ENST00000511551 NAA30Q147X3 362 aaPredicted RBP6.74□□□□□ -1.33
SCAMP1-204ENST00000511551 XKR5Q6UX68 686 aa6.74□□□□□ -1.33
SCAMP1-204ENST00000511551 RUSC1Q9BVN2 902 aa6.74□□□□□ -1.33
SCAMP1-204ENST00000511551 TMEM63CQ9P1W3 806 aa6.74□□□□□ -1.33
SCAMP1-204ENST00000511551 CNTN3Q9P232 1028 aa6.74□□□□□ -1.33
SCAMP1-204ENST00000511551 CPSF6Q16630 551 aaKnown RBP eCLIP6.73□□□□□ -1.33
SCAMP1-204ENST00000511551 MSMPQ1L6U9 139 aa6.73□□□□□ -1.33
SCAMP1-204ENST00000511551 FDX2Q6P4F2 183 aa6.73□□□□□ -1.33
SCAMP1-204ENST00000511551 ABI1Q8IZP0 508 aa6.73□□□□□ -1.33
SCAMP1-204ENST00000511551 ABTB2Q8N961 1025 aa6.73□□□□□ -1.33
SCAMP1-204ENST00000511551 MFSD14AQ96MC6 490 aa6.73□□□□□ -1.33
SCAMP1-204ENST00000511551 DZANK1Q9NVP4 752 aa6.73□□□□□ -1.33
SCAMP1-204ENST00000511551 PRNPP04156 253 aa6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 MAP4P27816 1152 aaKnown RBP6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 NLRP12P59046 1061 aa6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 SRPK2P78362 688 aaKnown RBP6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 CBLL1Q75N03 491 aa6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 GIMAP7Q8NHV1 300 aa6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 MKNK1Q9BUB5 465 aa6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 TMPRSS13Q9BYE2 586 aa6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 SUGCTQ9HAC7 445 aa6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 SOX13Q9UN79 622 aa6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 LEMD3Q9Y2U8 911 aa6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.72□□□□□ -1.33
SCAMP1-204ENST00000511551 PDE2AO00408 941 aaPredicted RBP6.71□□□□□ -1.34
SCAMP1-204ENST00000511551 F13BP05160 661 aa6.71□□□□□ -1.34
SCAMP1-204ENST00000511551 RPLP1P05386 114 aaKnown RBP6.71□□□□□ -1.34
SCAMP1-204ENST00000511551 FOSL1P15407 271 aa6.71□□□□□ -1.34
SCAMP1-204ENST00000511551 SMG8Q8ND04 991 aaKnown RBP6.71□□□□□ -1.34
SCAMP1-204ENST00000511551 STK32AQ8WU08 396 aa6.71□□□□□ -1.34
SCAMP1-204ENST00000511551 NUDT16Q96DE0 195 aaKnown RBP6.71□□□□□ -1.34
SCAMP1-204ENST00000511551 ATG3Q9NT62 314 aa6.71□□□□□ -1.34
SCAMP1-204ENST00000511551 KANSL3Q9P2N6 904 aa6.71□□□□□ -1.34
SCAMP1-204ENST00000511551 CCDC39Q9UFE4 941 aa6.71□□□□□ -1.34
SCAMP1-204ENST00000511551 GAS2O43903 313 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms