RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 DSC3Q14574 896 aa11.6□□□□□ -0.55
LINC01088-207ENST00000511241 NPAS4Q8IUM7 802 aa11.6□□□□□ -0.55
LINC01088-207ENST00000511241 ELP3Q9H9T3 547 aa11.6□□□□□ -0.55
LINC01088-207ENST00000511241 CTBSQ01459 385 aa11.59□□□□□ -0.55
LINC01088-207ENST00000511241 FBXO41Q8TF61 875 aa11.59□□□□□ -0.55
LINC01088-207ENST00000511241 PNMA5Q96PV4 448 aa11.59□□□□□ -0.55
LINC01088-207ENST00000511241 NSFL1CQ9UNZ2 370 aaKnown RBP11.59□□□□□ -0.55
LINC01088-207ENST00000511241 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
LINC01088-207ENST00000511241 TIAM1Q13009 1591 aa11.58□□□□□ -0.55
LINC01088-207ENST00000511241 MX2P20592 715 aa11.58□□□□□ -0.56
LINC01088-207ENST00000511241 GPR161Q8N6U8 529 aaKnown RBP11.58□□□□□ -0.56
LINC01088-207ENST00000511241 NIF3L1Q9GZT8 377 aa11.58□□□□□ -0.56
LINC01088-207ENST00000511241 AGLP35573 1532 aa11.58□□□□□ -0.56
LINC01088-207ENST00000511241 A6NHS1 94 aa11.57□□□□□ -0.56
LINC01088-207ENST00000511241 SASH3O75995 380 aa11.57□□□□□ -0.56
LINC01088-207ENST00000511241 FMR1Q06787 632 aaKnown RBP eCLIP11.57□□□□□ -0.56
LINC01088-207ENST00000511241 IRF7Q92985 503 aa11.57□□□□□ -0.56
LINC01088-207ENST00000511241 SLC30A3Q99726 388 aa11.57□□□□□ -0.56
LINC01088-207ENST00000511241 ABI2Q9NYB9 513 aaPredicted RBP11.57□□□□□ -0.56
LINC01088-207ENST00000511241 PRR12Q9ULL5 1215 aa11.57□□□□□ -0.56
LINC01088-207ENST00000511241 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.57□□□□□ -0.56
LINC01088-207ENST00000511241 KIAA1107Q9UPP5 1409 aa11.57□□□□□ -0.56
LINC01088-207ENST00000511241 MAP3K6O95382 1288 aa11.56□□□□□ -0.56
LINC01088-207ENST00000511241 BMP4P12644 408 aa11.56□□□□□ -0.56
LINC01088-207ENST00000511241 TARSP26639 723 aaKnown RBP11.56□□□□□ -0.56
LINC01088-207ENST00000511241 NFX1Q12986 1120 aaKnown RBP11.56□□□□□ -0.56
LINC01088-207ENST00000511241 GAS6Q14393 721 aa11.56□□□□□ -0.56
LINC01088-207ENST00000511241 TTC39BQ5VTQ0 682 aaPredicted RBP11.56□□□□□ -0.56
LINC01088-207ENST00000511241 SNX29Q8TEQ0 813 aa11.56□□□□□ -0.56
LINC01088-207ENST00000511241 PMEPA1Q969W9 287 aa11.56□□□□□ -0.56
LINC01088-207ENST00000511241 AVENQ9NQS1 362 aaPredicted RBP11.56□□□□□ -0.56
LINC01088-207ENST00000511241 MBIPQ9NS73 344 aa11.56□□□□□ -0.56
LINC01088-207ENST00000511241 C3P01024 1663 aa11.55□□□□□ -0.56
LINC01088-207ENST00000511241 ATP7AQ04656 1500 aa11.55□□□□□ -0.56
LINC01088-207ENST00000511241 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
LINC01088-207ENST00000511241 TNFRSF21O75509 655 aa11.55□□□□□ -0.56
LINC01088-207ENST00000511241 FGD1P98174 961 aa11.55□□□□□ -0.56
LINC01088-207ENST00000511241 GRIN2CQ14957 1233 aa11.55□□□□□ -0.56
LINC01088-207ENST00000511241 DNAJC25Q9H1X3 360 aa11.55□□□□□ -0.56
LINC01088-207ENST00000511241 MBD5Q9P267 1494 aa11.55□□□□□ -0.56
LINC01088-207ENST00000511241 UHRF1BP1Q6BDS2 1440 aa11.54□□□□□ -0.56
LINC01088-207ENST00000511241 RARAP10276 462 aa11.54□□□□□ -0.56
LINC01088-207ENST00000511241 MAP2K3P46734 347 aa11.54□□□□□ -0.56
LINC01088-207ENST00000511241 KRT25Q7Z3Z0 450 aa11.54□□□□□ -0.56
LINC01088-207ENST00000511241 BHMTQ93088 406 aa11.54□□□□□ -0.56
LINC01088-207ENST00000511241 TMEM63CQ9P1W3 806 aa11.54□□□□□ -0.56
LINC01088-207ENST00000511241 A2MP01023 1474 aa11.54□□□□□ -0.56
LINC01088-207ENST00000511241 NCOA2Q15596 1464 aa11.54□□□□□ -0.56
LINC01088-207ENST00000511241 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
LINC01088-207ENST00000511241 INO80Q9ULG1 1556 aaPredicted RBP11.54□□□□□ -0.56
LINC01088-207ENST00000511241 PLEKHH2Q8IVE3 1493 aa11.53□□□□□ -0.56
LINC01088-207ENST00000511241 SUPT6HQ7KZ85 1726 aaKnown RBP11.53□□□□□ -0.56
LINC01088-207ENST00000511241 C2CD2LO14523 706 aa11.53□□□□□ -0.56
LINC01088-207ENST00000511241 NFKB1P19838 968 aa11.53□□□□□ -0.56
LINC01088-207ENST00000511241 EAPPQ56P03 285 aaPredicted RBP11.53□□□□□ -0.56
LINC01088-207ENST00000511241 ZNF468Q5VIY5 522 aaPredicted RBP11.53□□□□□ -0.56
LINC01088-207ENST00000511241 GGT6Q6P531 493 aa11.53□□□□□ -0.56
LINC01088-207ENST00000511241 COL25A1Q9BXS0 654 aaPredicted RBP11.53□□□□□ -0.56
LINC01088-207ENST00000511241 PHACTR2O75167 634 aa11.52□□□□□ -0.57
LINC01088-207ENST00000511241 CSRNP1Q96S65 589 aa11.52□□□□□ -0.57
LINC01088-207ENST00000511241 TLR7Q9NYK1 1049 aaKnown RBP11.52□□□□□ -0.57
LINC01088-207ENST00000511241 ZFATQ9P243 1243 aa11.52□□□□□ -0.57
LINC01088-207ENST00000511241 PLXNC1O60486 1568 aa11.52□□□□□ -0.57
LINC01088-207ENST00000511241 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
LINC01088-207ENST00000511241 ZMYM3Q14202 1370 aa11.52□□□□□ -0.57
LINC01088-207ENST00000511241 MMP20O60882 483 aa11.51□□□□□ -0.57
LINC01088-207ENST00000511241 CPNE3O75131 537 aaKnown RBP11.51□□□□□ -0.57
LINC01088-207ENST00000511241 P4HBP07237 508 aaKnown RBP11.51□□□□□ -0.57
LINC01088-207ENST00000511241 SOX18P35713 384 aa11.51□□□□□ -0.57
LINC01088-207ENST00000511241 MAPK8P45983 427 aa11.51□□□□□ -0.57
LINC01088-207ENST00000511241 OR13H1Q8NG92 308 aa11.51□□□□□ -0.57
LINC01088-207ENST00000511241 BCL2L13Q9BXK5 485 aa11.51□□□□□ -0.57
LINC01088-207ENST00000511241 ZFYVE28Q9HCC9 887 aa11.51□□□□□ -0.57
LINC01088-207ENST00000511241 FOXD3Q9UJU5 478 aaPredicted RBP11.51□□□□□ -0.57
LINC01088-207ENST00000511241 STRCQ7RTU9 1775 aa11.51□□□□□ -0.57
LINC01088-207ENST00000511241 EIF1AYO14602 144 aaKnown RBP11.5□□□□□ -0.57
LINC01088-207ENST00000511241 SIN3BO75182 1162 aa11.5□□□□□ -0.57
LINC01088-207ENST00000511241 PSAPP07602 524 aa11.5□□□□□ -0.57
LINC01088-207ENST00000511241 ARAFP10398 606 aa11.5□□□□□ -0.57
LINC01088-207ENST00000511241 ATP2B2Q01814 1243 aa11.5□□□□□ -0.57
LINC01088-207ENST00000511241 ORC1Q13415 861 aa11.5□□□□□ -0.57
LINC01088-207ENST00000511241 ENOX2Q16206 610 aaKnown RBP11.5□□□□□ -0.57
LINC01088-207ENST00000511241 FBXO33Q7Z6M2 555 aa11.5□□□□□ -0.57
LINC01088-207ENST00000511241 SYT9Q86SS6 491 aa11.5□□□□□ -0.57
LINC01088-207ENST00000511241 FOXD4L4Q8WXT5 416 aaPredicted RBP11.5□□□□□ -0.57
LINC01088-207ENST00000511241 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
LINC01088-207ENST00000511241 CNTLNQ9NXG0 1405 aa11.5□□□□□ -0.57
LINC01088-207ENST00000511241 CAMSAP2Q08AD1 1489 aa11.5□□□□□ -0.57
LINC01088-207ENST00000511241 RBM47A0AV96 593 aaKnown RBP11.49□□□□□ -0.57
LINC01088-207ENST00000511241 HOXD8P13378 290 aaPredicted RBP11.49□□□□□ -0.57
LINC01088-207ENST00000511241 PCSK7Q16549 785 aa11.49□□□□□ -0.57
LINC01088-207ENST00000511241 ZNF326Q5BKZ1 582 aaKnown RBP11.49□□□□□ -0.57
LINC01088-207ENST00000511241 RAB44Q7Z6P3 723 aaPredicted RBP11.49□□□□□ -0.57
LINC01088-207ENST00000511241 C1orf127Q8N9H9 656 aa11.49□□□□□ -0.57
LINC01088-207ENST00000511241 CNTN3Q9P232 1028 aa11.49□□□□□ -0.57
LINC01088-207ENST00000511241 PHF20L1A8MW92 1017 aa11.48□□□□□ -0.57
LINC01088-207ENST00000511241 CES1P23141 567 aa11.48□□□□□ -0.57
LINC01088-207ENST00000511241 PLAURQ03405 335 aa11.48□□□□□ -0.57
LINC01088-207ENST00000511241 SRSF11Q05519 484 aaKnown RBP11.48□□□□□ -0.57
LINC01088-207ENST00000511241 DHX32Q7L7V1 743 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms